Literature DB >> 31895552

Side Chain Hydrogen-Bonding Interactions within Amyloid-like Fibrils Formed by the Low-Complexity Domain of FUS: Evidence from Solid State Nuclear Magnetic Resonance Spectroscopy.

Dylan T Murray1, Robert Tycko2.   

Abstract

In aqueous solutions, the 214-residue low-complexity domain of the FUS protein (FUS-LC) is known to undergo liquid-liquid phase separation and also to self-assemble into amyloid-like fibrils. In previous work based on solid state nuclear magnetic resonance (ssNMR) methods, a structural model for the FUS-LC fibril core was developed, showing that residues 39-95 form the fibril core. Unlike fibrils formed by amyloid-β peptides, α-synuclein, and other amyloid-forming proteins, the FUS-LC core is largely devoid of purely hydrophobic amino acid side chains. Instead, the core-forming segment contains numerous hydroxyl-bearing residues, including 18 serines, six threonines, and eight tyrosines, suggesting that the FUS-LC fibril structure may be stabilized in part by inter-residue hydrogen bonds among side chain hydroxyl groups. Here we describe ssNMR measurements, performed on 2H,15N,13C-labeled FUS-LC fibrils, that provide new information about the interactions of hydroxyl-bearing residues with one another and with water. The ssNMR data support the involvement of specific serine, threonine, and tyrosine residues in hydrogen-bonding interactions. The data also reveal differences in hydrogen exchange rates with water for different side chain hydroxyl groups, providing information about solvent exposure and penetration of water into the FUS-LC fibril core.

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Year:  2020        PMID: 31895552      PMCID: PMC7262780          DOI: 10.1021/acs.biochem.9b00892

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  57 in total

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Review 4.  Paraspeckles: Where Long Noncoding RNA Meets Phase Separation.

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7.  The LC Domain of hnRNPA2 Adopts Similar Conformations in Hydrogel Polymers, Liquid-like Droplets, and Nuclei.

Authors:  Siheng Xiang; Masato Kato; Leeju C Wu; Yi Lin; Ming Ding; Yajie Zhang; Yonghao Yu; Steven L McKnight
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Review 8.  Multiple Modes of Protein-Protein Interactions Promote RNP Granule Assembly.

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9.  Atomic-resolution three-dimensional structure of amyloid β fibrils bearing the Osaka mutation.

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10.  ALS/FTD Mutation-Induced Phase Transition of FUS Liquid Droplets and Reversible Hydrogels into Irreversible Hydrogels Impairs RNP Granule Function.

Authors:  Tetsuro Murakami; Seema Qamar; Julie Qiaojin Lin; Gabriele S Kaminski Schierle; Eric Rees; Akinori Miyashita; Ana R Costa; Roger B Dodd; Fiona T S Chan; Claire H Michel; Deborah Kronenberg-Versteeg; Yi Li; Seung-Pil Yang; Yosuke Wakutani; William Meadows; Rodylyn Rose Ferry; Liang Dong; Gian Gaetano Tartaglia; Giorgio Favrin; Wen-Lang Lin; Dennis W Dickson; Mei Zhen; David Ron; Gerold Schmitt-Ulms; Paul E Fraser; Neil A Shneider; Christine Holt; Michele Vendruscolo; Clemens F Kaminski; Peter St George-Hyslop
Journal:  Neuron       Date:  2015-10-29       Impact factor: 17.173

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  8 in total

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Journal:  Biochemistry       Date:  2020-06-05       Impact factor: 3.162

2.  Sequence Determines the Switch in the Fibril Forming Regions in the Low-Complexity FUS Protein and Its Variants.

Authors:  Abhinaw Kumar; Debayan Chakraborty; Mauro Lorenzo Mugnai; John E Straub; D Thirumalai
Journal:  J Phys Chem Lett       Date:  2021-09-13       Impact factor: 6.888

3.  Real-time observation of structure and dynamics during the liquid-to-solid transition of FUS LC.

Authors:  Raymond F Berkeley; Maryam Kashefi; Galia T Debelouchina
Journal:  Biophys J       Date:  2021-02-17       Impact factor: 4.033

4.  Characterization of design grammar of peptides for regulating liquid droplets and aggregates of FUS.

Authors:  Kiyoto Kamagata; Rika Chiba; Ichiro Kawahata; Nanako Iwaki; Saori Kanbayashi; Kana Maeda; Hiroto Takahashi; Atsushi Hirano; Koji Fukunaga; Keisuke Ikeda; Tomoshi Kameda
Journal:  Sci Rep       Date:  2021-03-23       Impact factor: 4.379

5.  Structure-dependent recruitment and diffusion of guest proteins in liquid droplets of FUS.

Authors:  Kiyoto Kamagata; Nanako Iwaki; Saori Kanbayashi; Trishit Banerjee; Rika Chiba; Virginie Gaudon; Bertrand Castaing; Seiji Sakomoto
Journal:  Sci Rep       Date:  2022-05-02       Impact factor: 4.996

6.  Molecular structure and interactions within amyloid-like fibrils formed by a low-complexity protein sequence from FUS.

Authors:  Myungwoon Lee; Ujjayini Ghosh; Kent R Thurber; Masato Kato; Robert Tycko
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7.  Molecular structure of an amyloid fibril formed by FUS low-complexity domain.

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Review 8.  Biological phase separation: cell biology meets biophysics.

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  8 in total

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