Literature DB >> 31857451

A genome-wide transcriptomic analysis of protein-coding genes in human blood cells.

Mathias Uhlen1,2,3, Max J Karlsson4, Wen Zhong4, Abdellah Tebani4, Christian Pou5, Jaromir Mikes5, Tadepally Lakshmikanth5, Björn Forsström4, Fredrik Edfors4, Jacob Odeberg4,6, Adil Mardinoglu4,7, Cheng Zhang4, Kalle von Feilitzen4, Jan Mulder2, Evelina Sjöstedt2, Andreas Hober4, Per Oksvold4, Martin Zwahlen4, Fredrik Ponten8, Cecilia Lindskog8, Åsa Sivertsson4, Linn Fagerberg4, Petter Brodin5,9.   

Abstract

Blood is the predominant source for molecular analyses in humans, both in clinical and research settings. It is the target for many therapeutic strategies, emphasizing the need for comprehensive molecular maps of the cells constituting human blood. In this study, we performed a genome-wide transcriptomic analysis of protein-coding genes in sorted blood immune cell populations to characterize the expression levels of each individual gene across the blood cell types. All data are presented in an interactive, open-access Blood Atlas as part of the Human Protein Atlas and are integrated with expression profiles across all major tissues to provide spatial classification of all protein-coding genes. This allows for a genome-wide exploration of the expression profiles across human immune cell populations and all major human tissues and organs.
Copyright © 2019 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

Entities:  

Mesh:

Substances:

Year:  2019        PMID: 31857451     DOI: 10.1126/science.aax9198

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  96 in total

Review 1.  Genetics meets proteomics: perspectives for large population-based studies.

Authors:  Karsten Suhre; Mark I McCarthy; Jochen M Schwenk
Journal:  Nat Rev Genet       Date:  2020-08-28       Impact factor: 53.242

2.  X-linked recessive TLR7 deficiency in ~1% of men under 60 years old with life-threatening COVID-19.

Authors:  Takaki Asano; Bertrand Boisson; Fanny Onodi; Daniela Matuozzo; Marcela Moncada-Velez; Majistor Raj Luxman Maglorius Renkilaraj; Peng Zhang; Laurent Meertens; Alexandre Bolze; Marie Materna; Richard P Lifton; Paul Bastard; Luigi D Notarangelo; Laurent Abel; Helen C Su; Emmanuelle Jouanguy; Ali Amara; Vassili Soumelis; Aurélie Cobat; Qian Zhang; Jean-Laurent Casanova; Sarantis Korniotis; Adrian Gervais; Estelle Talouarn; Benedetta Bigio; Yoann Seeleuthner; Kaya Bilguvar; Yu Zhang; Anna-Lena Neehus; Masato Ogishi; Simon J Pelham; Tom Le Voyer; Jérémie Rosain; Quentin Philippot; Pere Soler-Palacín; Roger Colobran; Andrea Martin-Nalda; Jacques G Rivière; Yacine Tandjaoui-Lambiotte; Khalil Chaïbi; Mohammad Shahrooei; Ilad Alavi Darazam; Nasrin Alipour Olyaei; Davood Mansouri; Nevin Hatipoğlu; Figen Palabiyik; Tayfun Ozcelik; Giuseppe Novelli; Antonio Novelli; Giorgio Casari; Alessandro Aiuti; Paola Carrera; Simone Bondesan; Federica Barzaghi; Patrizia Rovere-Querini; Cristina Tresoldi; Jose Luis Franco; Julian Rojas; Luis Felipe Reyes; Ingrid G Bustos; Andres Augusto Arias; Guillaume Morelle; Kyheng Christèle; Jesús Troya; Laura Planas-Serra; Agatha Schlüter; Marta Gut; Aurora Pujol; Luis M Allende; Carlos Rodriguez-Gallego; Carlos Flores; Oscar Cabrera-Marante; Daniel E Pleguezuelo; Rebeca Pérez de Diego; Sevgi Keles; Gokhan Aytekin; Ozge Metin Akcan; Yenan T Bryceson; Peter Bergman; Petter Brodin; Daniel Smole; C I Edvard Smith; Anna-Carin Norlin; Tessa M Campbell; Laura E Covill; Lennart Hammarström; Qiang Pan-Hammarström; Hassan Abolhassani; Shrikant Mane; Nico Marr; Manar Ata; Fatima Al Ali; Taushif Khan; András N Spaan; Clifton L Dalgard; Paolo Bonfanti; Andrea Biondi; Sarah Tubiana; Charles Burdet; Robert Nussbaum; Amanda Kahn-Kirby; Andrew L Snow; Jacinta Bustamante; Anne Puel; Stéphanie Boisson-Dupuis; Shen-Ying Zhang; Vivien Béziat
Journal:  Sci Immunol       Date:  2021-08-19

3.  Research on the Human Proteome Reaches a Major Milestone: >90% of Predicted Human Proteins Now Credibly Detected, According to the HUPO Human Proteome Project.

Authors:  Gilbert S Omenn; Lydie Lane; Christopher M Overall; Ileana M Cristea; Fernando J Corrales; Cecilia Lindskog; Young-Ki Paik; Jennifer E Van Eyk; Siqi Liu; Stephen R Pennington; Michael P Snyder; Mark S Baker; Nuno Bandeira; Ruedi Aebersold; Robert L Moritz; Eric W Deutsch
Journal:  J Proteome Res       Date:  2020-10-19       Impact factor: 4.466

4.  Herpes simplex encephalitis in a patient with a distinctive form of inherited IFNAR1 deficiency.

Authors:  Paul Bastard; Jeremy Manry; Jie Chen; Jérémie Rosain; Yoann Seeleuthner; Omar AbuZaitun; Lazaro Lorenzo; Taushif Khan; Mary Hasek; Nicholas Hernandez; Benedetta Bigio; Peng Zhang; Romain Lévy; Shai Shrot; Eduardo J Garcia Reino; Yoon-Seung Lee; Soraya Boucherit; Mélodie Aubart; Rik Gijsbers; Vivien Béziat; Zhi Li; Sandra Pellegrini; Flore Rozenberg; Nico Marr; Isabelle Meyts; Bertrand Boisson; Aurélie Cobat; Jacinta Bustamante; Qian Zhang; Emmanuelle Jouangy; Laurent Abel; Raz Somech; Jean-Laurent Casanova; Shen-Ying Zhang
Journal:  J Clin Invest       Date:  2021-01-04       Impact factor: 14.808

5.  Clinical and Biological Subtypes of B-cell Lymphoma Revealed by Microenvironmental Signatures.

Authors:  Nikita Kotlov; Alexander Bagaev; Maria V Revuelta; Jude M Phillip; Maria Teresa Cacciapuoti; Zoya Antysheva; Viktor Svekolkin; Ekaterina Tikhonova; Natalia Miheecheva; Natalia Kuzkina; Grigorii Nos; Fabrizio Tabbo; Felix Frenkel; Paola Ghione; Maria Tsiper; Nava Almog; Nathan Fowler; Ari M Melnick; John P Leonard; Giorgio Inghirami; Leandro Cerchietti
Journal:  Cancer Discov       Date:  2021-02-04       Impact factor: 39.397

6.  Immune determinants of COVID-19 disease presentation and severity.

Authors:  Petter Brodin
Journal:  Nat Med       Date:  2021-01-13       Impact factor: 53.440

7.  Lysosomal Dysfunction and Other Pathomechanisms in FTLD: Evidence from Progranulin Genetics and Biology.

Authors:  Xiaolai Zhou; Thomas Kukar; Rosa Rademakers
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

8.  Transcriptomic Analysis of Peripheral Monocytes upon Fingolimod Treatment in Relapsing Remitting Multiple Sclerosis Patients.

Authors:  G Sferruzza; F Clarelli; E Mascia; L Ferrè; L Ottoboni; M Sorosina; S Santoro; L Moiola; V Martinelli; G Comi; F Martinelli Boneschi; M Filippi; P Provero; Federica Esposito
Journal:  Mol Neurobiol       Date:  2021-06-28       Impact factor: 5.590

9.  The Human Protein Atlas-Spatial localization of the human proteome in health and disease.

Authors:  Andreas Digre; Cecilia Lindskog
Journal:  Protein Sci       Date:  2020-11-13       Impact factor: 6.725

10.  SARS-CoV-2 viremia is associated with distinct proteomic pathways and predicts COVID-19 outcomes.

Authors:  Yijia Li; Alexis M Schneider; Arnav Mehta; Moshe Sade-Feldman; Kyle R Kays; Matteo Gentili; Nicole C Charland; Anna Lk Gonye; Irena Gushterova; Hargun K Khanna; Thomas J LaSalle; Kendall M Lavin-Parsons; Brendan M Lilley; Carl L Lodenstein; Kasidet Manakongtreecheep; Justin D Margolin; Brenna N McKaig; Blair A Parry; Maricarmen Rojas-Lopez; Brian C Russo; Nihaarika Sharma; Jessica Tantivit; Molly F Thomas; James Regan; James P Flynn; Alexandra-Chloé Villani; Nir Hacohen; Marcia B Goldberg; Michael R Filbin; Jonathan Z Li
Journal:  J Clin Invest       Date:  2021-07-01       Impact factor: 14.808

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.