Literature DB >> 34196300

SARS-CoV-2 viremia is associated with distinct proteomic pathways and predicts COVID-19 outcomes.

Yijia Li1,2, Alexis M Schneider3,4, Arnav Mehta2,3,5,6, Moshe Sade-Feldman2,3,6, Kyle R Kays2, Matteo Gentili3, Nicole C Charland2, Anna Lk Gonye2,3,6, Irena Gushterova2,3,6, Hargun K Khanna2, Thomas J LaSalle2,3,6, Kendall M Lavin-Parsons2, Brendan M Lilley2, Carl L Lodenstein2, Kasidet Manakongtreecheep2,3, Justin D Margolin2, Brenna N McKaig2, Blair A Parry2, Maricarmen Rojas-Lopez7,8, Brian C Russo7,8, Nihaarika Sharma2,3, Jessica Tantivit2,3,9, Molly F Thomas2,3,9, James Regan1, James P Flynn1, Alexandra-Chloé Villani2,3,9, Nir Hacohen2,3,6, Marcia B Goldberg2,3,7,8, Michael R Filbin2,3, Jonathan Z Li1.   

Abstract

BACKGROUNDSARS-CoV-2 plasma viremia has been associated with severe disease and death in COVID-19 in small-scale cohort studies. The mechanisms behind this association remain elusive.METHODSWe evaluated the relationship between SARS-CoV-2 viremia, disease outcome, and inflammatory and proteomic profiles in a cohort of COVID-19 emergency department participants. SARS-CoV-2 viral load was measured using a quantitative reverse transcription PCR-based platform. Proteomic data were generated with Proximity Extension Assay using the Olink platform.RESULTSThis study included 300 participants with nucleic acid test-confirmed COVID-19. Plasma SARS-CoV-2 viremia levels at the time of presentation predicted adverse disease outcomes, with an adjusted OR of 10.6 (95% CI 4.4-25.5, P < 0.001) for severe disease (mechanical ventilation and/or 28-day mortality) and 3.9 (95% CI 1.5-10.1, P = 0.006) for 28-day mortality. Proteomic analyses revealed prominent proteomic pathways associated with SARS-CoV-2 viremia, including upregulation of SARS-CoV-2 entry factors (ACE2, CTSL, FURIN), heightened markers of tissue damage to the lungs, gastrointestinal tract, and endothelium/vasculature, and alterations in coagulation pathways.CONCLUSIONThese results highlight the cascade of vascular and tissue damage associated with SARS-CoV-2 plasma viremia that underlies its ability to predict COVID-19 disease outcomes.FUNDINGMark and Lisa Schwartz; the National Institutes of Health (U19AI082630); the American Lung Association; the Executive Committee on Research at Massachusetts General Hospital; the Chan Zuckerberg Initiative; Arthur, Sandra, and Sarah Irving for the David P. Ryan, MD, Endowed Chair in Cancer Research; an EMBO Long-Term Fellowship (ALTF 486-2018); a Cancer Research Institute/Bristol Myers Squibb Fellowship (CRI2993); the Harvard Catalyst/Harvard Clinical and Translational Science Center (National Center for Advancing Translational Sciences, NIH awards UL1TR001102 and UL1TR002541-01); and by the Harvard University Center for AIDS Research (National Institute of Allergy and Infectious Diseases, 5P30AI060354).

Entities:  

Keywords:  COVID-19; Fibrosis; Infectious disease; Proteomics; Pulmonary surfactants

Mesh:

Substances:

Year:  2021        PMID: 34196300      PMCID: PMC8245177          DOI: 10.1172/JCI148635

Source DB:  PubMed          Journal:  J Clin Invest        ISSN: 0021-9738            Impact factor:   14.808


  48 in total

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2.  Bactericidal properties of human and murine groups I, II, V, X, and XII secreted phospholipases A(2).

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Journal:  J Biol Chem       Date:  2001-11-02       Impact factor: 5.157

3.  Compromised Humoral Functional Evolution Tracks with SARS-CoV-2 Mortality.

Authors:  Tomer Zohar; Carolin Loos; Stephanie Fischinger; Caroline Atyeo; Chuangqi Wang; Matthew D Slein; John Burke; Jingyou Yu; Jared Feldman; Blake Marie Hauser; Tim Caradonna; Aaron G Schmidt; Yongfei Cai; Hendrik Streeck; Edward T Ryan; Dan H Barouch; Richelle C Charles; Douglas A Lauffenburger; Galit Alter
Journal:  Cell       Date:  2020-11-03       Impact factor: 41.582

4.  Increased Prevalence of Myocardial Injury in Patients with SARS-CoV-2 Viremia.

Authors:  Hasan K Siddiqi; Brittany Weber; Guohai Zhou; James Regan; Jesse Fajnzylber; Kendyll Coxen; Heather Corry; Xu G Yu; Marcelo DiCarli; Jonathan Z Li; Deepak L Bhatt
Journal:  Am J Med       Date:  2020-11-10       Impact factor: 4.965

5.  A single-cell atlas of the peripheral immune response in patients with severe COVID-19.

Authors:  Aaron J Wilk; Arjun Rustagi; Nancy Q Zhao; Jonasel Roque; Giovanny J Martínez-Colón; Julia L McKechnie; Geoffrey T Ivison; Thanmayi Ranganath; Rosemary Vergara; Taylor Hollis; Laura J Simpson; Philip Grant; Aruna Subramanian; Angela J Rogers; Catherine A Blish
Journal:  Nat Med       Date:  2020-06-08       Impact factor: 53.440

6.  Liver Fibrosis Index FIB-4 Is Associated With Mortality in COVID-19.

Authors:  Yijia Li; James Regan; Jesse Fajnzylber; Kendyll Coxen; Heather Corry; Colline Wong; Alexandra Rosenthal; Caroline Atyeo; Stephanie Fischinger; Elizabeth Gillespie; Rida Chishti; Lindsey Baden; Xu G Yu; Galit Alter; Arthur Kim; Jonathan Z Li
Journal:  Hepatol Commun       Date:  2020-12-10

7.  Autopsy Findings and Venous Thromboembolism in Patients With COVID-19: A Prospective Cohort Study.

Authors:  Dominic Wichmann; Jan-Peter Sperhake; Marc Lütgehetmann; Stefan Steurer; Carolin Edler; Axel Heinemann; Fabian Heinrich; Herbert Mushumba; Inga Kniep; Ann Sophie Schröder; Christoph Burdelski; Geraldine de Heer; Axel Nierhaus; Daniel Frings; Susanne Pfefferle; Heinrich Becker; Hanns Bredereke-Wiedling; Andreas de Weerth; Hans-Richard Paschen; Sara Sheikhzadeh-Eggers; Axel Stang; Stefan Schmiedel; Carsten Bokemeyer; Marylyn M Addo; Martin Aepfelbacher; Klaus Püschel; Stefan Kluge
Journal:  Ann Intern Med       Date:  2020-05-06       Impact factor: 25.391

8.  SARS-CoV-2 viral load is associated with increased disease severity and mortality.

Authors:  Jesse Fajnzylber; James Regan; Kendyll Coxen; Heather Corry; Colline Wong; Alexandra Rosenthal; Daniel Worrall; Francoise Giguel; Alicja Piechocka-Trocha; Caroline Atyeo; Stephanie Fischinger; Andrew Chan; Keith T Flaherty; Kathryn Hall; Michael Dougan; Edward T Ryan; Elizabeth Gillespie; Rida Chishti; Yijia Li; Nikolaus Jilg; Dusan Hanidziar; Rebecca M Baron; Lindsey Baden; Athe M Tsibris; Katrina A Armstrong; Daniel R Kuritzkes; Galit Alter; Bruce D Walker; Xu Yu; Jonathan Z Li
Journal:  Nat Commun       Date:  2020-10-30       Impact factor: 14.919

9.  High Frequency of SARS-CoV-2 RNAemia and Association With Severe Disease.

Authors:  Catherine A Hogan; Bryan A Stevens; Malaya K Sahoo; ChunHong Huang; Natasha Garamani; Saurabh Gombar; Fumiko Yamamoto; Kanagavel Murugesan; Jason Kurzer; James Zehnder; Benjamin A Pinsky
Journal:  Clin Infect Dis       Date:  2021-05-04       Impact factor: 9.079

10.  Histopathological findings and viral tropism in UK patients with severe fatal COVID-19: a post-mortem study.

Authors:  Brian Hanley; Kikkeri N Naresh; Candice Roufosse; Andrew G Nicholson; Justin Weir; Graham S Cooke; Mark Thursz; Pinelopi Manousou; Richard Corbett; Robert Goldin; Safa Al-Sarraj; Alireza Abdolrasouli; Olivia C Swann; Laury Baillon; Rebecca Penn; Wendy S Barclay; Patrizia Viola; Michael Osborn
Journal:  Lancet Microbe       Date:  2020-08-20
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  31 in total

1.  Vasopressin infusion in COVID-19 critical illness is not associated with impaired viral clearance: a pilot study.

Authors:  Daniel E Leisman; Arnav Mehta; Yijia Li; Kyle R Kays; Jonathan Z Li; Michael R Filbin; Marcia B Goldberg
Journal:  Br J Anaesth       Date:  2021-07-20       Impact factor: 11.719

Review 2.  Pathogenic Mechanism and Multi-omics Analysis of Oral Manifestations in COVID-19.

Authors:  Ming Hao; Dongxu Wang; Qianyun Xia; Shaoning Kan; Lu Chang; Huimin Liu; Zhijing Yang; Weiwei Liu
Journal:  Front Immunol       Date:  2022-07-04       Impact factor: 8.786

Review 3.  Hallmarks of Severe COVID-19 Pathogenesis: A Pas de Deux Between Viral and Host Factors.

Authors:  Roberta Rovito; Matteo Augello; Assaf Ben-Haim; Valeria Bono; Antonella d'Arminio Monforte; Giulia Marchetti
Journal:  Front Immunol       Date:  2022-06-10       Impact factor: 8.786

4.  SARS-CoV-2 Viremia Precedes an IL6 Response in Severe COVID-19 Patients: Results of a Longitudinal Prospective Cohort.

Authors:  Emilia Roy-Vallejo; Laura Cardeñoso; Ana Triguero-Martínez; Marta Chicot Llano; Nelly Zurita; Elena Ávalos; Ana Barrios; Julia Hernando; Javier Ortiz; Sebastián C Rodríguez-García; Marianela Ciudad Sañudo; Celeste Marcos; Elena García Castillo; Leticia Fontán García-Rodrigo; Begoña González; Rosa Méndez; Isabel Iturrate; Ancor Sanz-García; Almudena Villa; Ana Sánchez-Azofra; Begoña Quicios; David Arribas; Jesús Álvarez Rodríguez; Pablo Patiño; Marina Trigueros; Miren Uriarte; Alexandra Martín-Ramírez; Cristina Arévalo Román; José María Galván-Román; Rosario García-Vicuña; Julio Ancochea; Cecilia Muñoz-Calleja; Elena Fernández-Ruiz; Rafael de la Cámara; Carmen Suárez Fernández; Isidoro González-Álvaro; Diego A Rodríguez-Serrano
Journal:  Front Med (Lausanne)       Date:  2022-06-15

5.  Severe Acute Respiratory Syndrome Coronavirus 2 RNAemia and Clinical Outcomes in Children With Coronavirus Disease 2019.

Authors:  Cameron Mertz; Rebecca Glowinski; Shira H Cohen; Sara Mertz; Fang Ye; Mark W Hall; Mark E Peeples; Tiffany King; Huanyu Wang; Amy L Leber; Pablo J Sanchez; Octavio Ramilo; Asuncion Mejias
Journal:  J Infect Dis       Date:  2022-01-18       Impact factor: 7.759

Review 6.  The skin as a critical window in unveiling the pathophysiologic principles of COVID-19.

Authors:  Cynthia Magro; Gerard Nuovo; J Justin Mulvey; Jeffrey Laurence; Joanna Harp; A Neil Crowson
Journal:  Clin Dermatol       Date:  2021-07-22       Impact factor: 3.541

7.  Cross-validation of SARS-CoV-2 responses in kidney organoids and clinical populations.

Authors:  Louisa Helms; Silvia Marchiano; Ian B Stanaway; Tien-Ying Hsiang; Benjamin A Juliar; Shally Saini; Yan Ting Zhao; Akshita Khanna; Rajasree Menon; Fadhl Alakwaa; Carmen Mikacenic; Eric D Morrell; Mark M Wurfel; Matthias Kretzler; Jennifer L Harder; Charles E Murry; Jonathan Himmelfarb; Hannele Ruohola-Baker; Pavan K Bhatraju; Michael Gale; Benjamin S Freedman
Journal:  JCI Insight       Date:  2021-12-22

Review 8.  ACE2 Shedding and the Role in COVID-19.

Authors:  Jieqiong Wang; Huiying Zhao; Youzhong An
Journal:  Front Cell Infect Microbiol       Date:  2022-01-14       Impact factor: 5.293

9.  Neutrophil Profiles of Pediatric COVID-19 and Multisystem Inflammatory Syndrome in Children.

Authors:  Brittany P Boribong; Thomas J LaSalle; Yannic C Bartsch; Felix Ellett; Maggie E Loiselle; Jameson P Davis; Anna L K Gonye; Soroush Hajizadeh; Johannes Kreuzer; Shiv Pillai; Wilhelm Haas; Andrea Edlow; Alessio Fasano; Galit Alter; Daniel Irimia; Moshe Sade-Feldman; Lael M Yonker
Journal:  bioRxiv       Date:  2021-12-20

10.  Severe Acute Respiratory Syndrome Coronavirus 2 Viremia Is Associated With Coronavirus Disease 2019 Severity and Predicts Clinical Outcomes.

Authors:  Jana L Jacobs; William Bain; Asma Naqvi; Brittany Staines; Priscila M S Castanha; Haopu Yang; Valerie F Boltz; Simon Barratt-Boyes; Ernesto T A Marques; Stephanie L Mitchell; Barbara Methé; Tolani F Olonisakin; Ghady Haidar; Thomas W Burke; Elizabeth Petzold; Thomas Denny; Chris W Woods; Bryan J McVerry; Janet S Lee; Simon C Watkins; Claudette M St Croix; Alison Morris; Mary F Kearney; Mark S Ladinsky; Pamela J Bjorkman; Georgios D Kitsios; John W Mellors
Journal:  Clin Infect Dis       Date:  2022-05-03       Impact factor: 20.999

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