Literature DB >> 31853061

Frequent mutations that converge on the NFKBIZ pathway in ulcerative colitis.

Nobuyuki Kakiuchi1,2,3, Kenichi Yoshida1, Motoi Uchino4, Takako Kihara5, Kotaro Akaki6, Yoshikage Inoue1,2,7, Kenji Kawada7, Satoshi Nagayama8, Akira Yokoyama1,9, Shuji Yamamoto3, Minoru Matsuura3,10, Takahiro Horimatsu9, Tomonori Hirano1,2,3, Norihiro Goto3, Yasuhide Takeuchi1,2,11,12, Yotaro Ochi1,2, Yusuke Shiozawa1, Yasunori Kogure1,13, Yosaku Watatani1,2, Yoichi Fujii1,2, Soo Ki Kim1,3, Ayana Kon1,2, Keisuke Kataoka1,13, Tetsuichi Yoshizato1, Masahiro M Nakagawa1,2, Akinori Yoda1,2, Yasuhito Nanya1,2, Hideki Makishima1,2, Yuichi Shiraishi14, Kenichi Chiba14, Hiroko Tanaka15, Masashi Sanada1,16, Eiji Sugihara17, Taka-Aki Sato17, Takashi Maruyama18, Hiroyuki Miyoshi19, Makoto Mark Taketo19, Jun Oishi20, Ryosaku Inagaki1,20, Yutaka Ueda20, Shinya Okamoto21, Hideaki Okajima21,22, Yoshiharu Sakai7, Takaki Sakurai11, Hironori Haga12, Seiichi Hirota5, Hiroki Ikeuchi4, Hiroshi Nakase3,23, Hiroyuki Marusawa3, Tsutomu Chiba3,24, Osamu Takeuchi6, Satoru Miyano14,15, Hiroshi Seno3, Seishi Ogawa25,26,27.   

Abstract

Chronic inflammation is accompanied by recurring cycles of tissue destruction and repair and is associated with an increased risk of cancer1-3. However, how such cycles affect the clonal composition of tissues, particularly in terms of cancer development, remains unknown. Here we show that in patients with ulcerative colitis, the inflamed intestine undergoes widespread remodelling by pervasive clones, many of which are positively selected by acquiring mutations that commonly involve the NFKBIZ, TRAF3IP2, ZC3H12A, PIGR and HNRNPF genes and are implicated in the downregulation of IL-17 and other pro-inflammatory signals. Mutational profiles vary substantially between colitis-associated cancer and non-dysplastic tissues in ulcerative colitis, which indicates that there are distinct mechanisms of positive selection in both tissues. In particular, mutations in NFKBIZ are highly prevalent in the epithelium of patients with ulcerative colitis but rarely found in both sporadic and colitis-associated cancer, indicating that NFKBIZ-mutant cells are selected against during colorectal carcinogenesis. In further support of this negative selection, we found that tumour formation was significantly attenuated in Nfkbiz-mutant mice and cell competition was compromised by disruption of NFKBIZ in human colorectal cancer cells. Our results highlight common and discrete mechanisms of clonal selection in inflammatory tissues, which reveal unexpected cancer vulnerabilities that could potentially be exploited for therapeutics in colorectal cancer.

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Year:  2019        PMID: 31853061     DOI: 10.1038/s41586-019-1856-1

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  1 in total

1.  Tumor evolution. High burden and pervasive positive selection of somatic mutations in normal human skin.

Authors:  Iñigo Martincorena; Amit Roshan; Moritz Gerstung; Peter Ellis; Peter Van Loo; Stuart McLaren; David C Wedge; Anthony Fullam; Ludmil B Alexandrov; Jose M Tubio; Lucy Stebbings; Andrew Menzies; Sara Widaa; Michael R Stratton; Philip H Jones; Peter J Campbell
Journal:  Science       Date:  2015-05-22       Impact factor: 47.728

  1 in total
  43 in total

1.  Multi-omic profiling of peritoneal metastases in gastric cancer identifies molecular subtypes and therapeutic vulnerabilities.

Authors:  Yosuke Tanaka; Fumiko Chiwaki; Shinya Kojima; Masahito Kawazu; Masayuki Komatsu; Toshihide Ueno; Satoshi Inoue; Shigeki Sekine; Keisuke Matsusaki; Hiromichi Matsushita; Narikazu Boku; Yae Kanai; Yasushi Yatabe; Hiroki Sasaki; Hiroyuki Mano
Journal:  Nat Cancer       Date:  2021-08-16

Review 2.  RNA metabolism and links to inflammatory regulation and disease.

Authors:  Hui-Chi Lai; Uda Y Ho; Alexander James; Paul De Souza; Tara L Roberts
Journal:  Cell Mol Life Sci       Date:  2021-12-31       Impact factor: 9.261

Review 3.  Mechanisms involved in hematopoietic stem cell aging.

Authors:  Takeshi Fujino; Shuhei Asada; Susumu Goyama; Toshio Kitamura
Journal:  Cell Mol Life Sci       Date:  2022-08-08       Impact factor: 9.207

4.  IκBζ controls IL-17-triggered gene expression program in intestinal epithelial cells that restricts colonization of SFB and prevents Th17-associated pathologies.

Authors:  Soh Yamazaki; Naohiro Inohara; Masaki Ohmuraya; Yousuke Tsuneoka; Hideo Yagita; Takaharu Katagiri; Takashi Nishina; Tetuo Mikami; Hiromasa Funato; Kimi Araki; Hiroyasu Nakano
Journal:  Mucosal Immunol       Date:  2022-08-24       Impact factor: 8.701

Review 5.  Clonal expansion in non-cancer tissues.

Authors:  Nobuyuki Kakiuchi; Seishi Ogawa
Journal:  Nat Rev Cancer       Date:  2021-02-24       Impact factor: 60.716

6.  The immunomodulatory role of Regnase family RNA-binding proteins.

Authors:  Maximilian Fischer; Tobias Weinberger; Christian Schulz
Journal:  RNA Biol       Date:  2020-08-05       Impact factor: 4.652

7.  Indolent feature of Helicobacter pylori-uninfected intramucosal signet ring cell carcinomas with CDH1 mutations.

Authors:  Mitsuhiro Nikaido; Nobuyuki Kakiuchi; Shin'ichi Miyamoto; Tomonori Hirano; Yasuhide Takeuchi; Taro Funakoshi; Akira Yokoyama; Tatsuki Ogasawara; Yoshihiro Yamamoto; Atsushi Yamada; Takeshi Setoyama; Takahiro Shimizu; Yukari Kato; Suguru Uose; Takaki Sakurai; Sachiko Minamiguchi; Kazutaka Obama; Yoshiharu Sakai; Manabu Muto; Tsutomu Chiba; Seishi Ogawa; Hiroshi Seno
Journal:  Gastric Cancer       Date:  2021-05-07       Impact factor: 7.370

8.  Functional Analysis of the Transcriptional Regulator IκB-ζ in Intestinal Homeostasis.

Authors:  Tomoki Sasaki; Hiroyuki Nagashima; Atsushi Okuma; Takeshi Yamauchi; Kenshi Yamasaki; Setsuya Aiba; Takanori So; Naoto Ishii; Yuji Owada; Takashi MaruYama; Shuhei Kobayashi
Journal:  Dig Dis Sci       Date:  2021-04-05       Impact factor: 3.199

9.  PolyG-DS: An ultrasensitive polyguanine tract-profiling method to detect clonal expansions and trace cell lineage.

Authors:  Yuezheng Zhang; Brendan F Kohrn; Ming Yang; Daniela Nachmanson; T Rinda Soong; I-Hsiu Lee; Yong Tao; Hans Clevers; Elizabeth M Swisher; Teresa A Brentnall; Lawrence A Loeb; Scott R Kennedy; Jesse J Salk; Kamila Naxerova; Rosa Ana Risques
Journal:  Proc Natl Acad Sci U S A       Date:  2021-08-03       Impact factor: 11.205

10.  Molecular classification and diagnostics of upper urinary tract urothelial carcinoma.

Authors:  Yoichi Fujii; Yusuke Sato; Hiromichi Suzuki; Nobuyuki Kakiuchi; Tetsuichi Yoshizato; Andrew T Lenis; Shigekatsu Maekawa; Akira Yokoyama; Yasuhide Takeuchi; Yoshikage Inoue; Yotaro Ochi; Yusuke Shiozawa; Kosuke Aoki; Kenichi Yoshida; Keisuke Kataoka; Masahiro M Nakagawa; Yasuhito Nannya; Hideki Makishima; Jimpei Miyakawa; Taketo Kawai; Teppei Morikawa; Yuichi Shiraishi; Kenichi Chiba; Hiroko Tanaka; Genta Nagae; Masashi Sanada; Eiji Sugihara; Taka-Aki Sato; Tohru Nakagawa; Masashi Fukayama; Tetsuo Ushiku; Hiroyuki Aburatani; Satoru Miyano; Jonathan A Coleman; Yukio Homma; David B Solit; Haruki Kume; Seishi Ogawa
Journal:  Cancer Cell       Date:  2021-06-14       Impact factor: 38.585

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