Literature DB >> 3180224

Site selection by the tRNA splicing endonuclease of Xenopus laevis.

E Mattoccia1, I M Baldi, D Gandini-Attardi, S Ciafrè, G P Tocchini-Valentini.   

Abstract

To investigate the mechanism by which the purified Xenopus tRNA splicing endonuclease recognizes its splice sites, we utilized yeast pre-tRNA(3Leu) and pre-tRNA(Phe) variants constructed by in vitro mutagenesis. We found that the endonuclease interacts with conserved features of the mature tRNA domain. In particular, U8 and C56 may be examples of contact points between protein and RNA. Given that there are no conserved sequences at the splice junctions, the specificity of cutting at both splice sites is determined by the length of the anticodon stem. Although in general, the sequence of the intron is unimportant for splicing, there are some structural requirements.

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Year:  1988        PMID: 3180224     DOI: 10.1016/0092-8674(88)90231-0

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  22 in total

1.  Cleavage of non-tRNA substrates by eukaryal tRNA splicing endonucleases.

Authors:  P Fruscoloni; M I Baldi; G P Tocchini-Valentini
Journal:  EMBO Rep       Date:  2001-03       Impact factor: 8.807

2.  snoRNA nuclear import and potential for cotranscriptional function in pre-rRNA processing.

Authors:  B A Peculis
Journal:  RNA       Date:  2001-02       Impact factor: 4.942

3.  Structural investigation of the in vitro transcript of the yeast tRNA(phe) precursor by NMR and nuclease mapping.

Authors:  K B Hall; J R Sampson
Journal:  Nucleic Acids Res       Date:  1990-12-11       Impact factor: 16.971

4.  Transcription factor IIIB generates extended DNA interactions in RNA polymerase III transcription complexes on tRNA genes.

Authors:  G A Kassavetis; D L Riggs; R Negri; L H Nguyen; E P Geiduschek
Journal:  Mol Cell Biol       Date:  1989-06       Impact factor: 4.272

5.  Coevolution of tRNA intron motifs and tRNA endonuclease architecture in Archaea.

Authors:  Giuseppe D Tocchini-Valentini; Paolo Fruscoloni; Glauco P Tocchini-Valentini
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-12       Impact factor: 11.205

6.  Structure, function, and evolution of the tRNA endonucleases of Archaea: an example of subfunctionalization.

Authors:  Giuseppe D Tocchini-Valentini; Paolo Fruscoloni; Glauco P Tocchini-Valentini
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-03       Impact factor: 11.205

7.  The dawn of dominance by the mature domain in tRNA splicing.

Authors:  Giuseppe D Tocchini-Valentini; Paolo Fruscoloni; Glauco P Tocchini-Valentini
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-16       Impact factor: 11.205

8.  Conserved mechanism of tRNA splicing in eukaryotes.

Authors:  M Zillmann; M A Gorovsky; E M Phizicky
Journal:  Mol Cell Biol       Date:  1991-11       Impact factor: 4.272

9.  A pre-tRNA carrying intron features typical of Archaea is spliced in yeast.

Authors:  Gianfranco Di Segni; Lodovica Borghese; Silvia Sebastiani; Glauco P Tocchini-Valentini
Journal:  RNA       Date:  2004-12-01       Impact factor: 4.942

10.  Cis- and trans-splicing of mRNAs mediated by tRNA sequences in eukaryotic cells.

Authors:  Gianfranco Di Segni; Serena Gastaldi; Glauco P Tocchini-Valentini
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-05       Impact factor: 11.205

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