Literature DB >> 31771860

De Novo Damaging DNA Coding Mutations Are Associated With Obsessive-Compulsive Disorder and Overlap With Tourette's Disorder and Autism.

Carolina Cappi1, Melody E Oliphant2, Zsanett Péter2, Gwyneth Zai3, Maria Conceição do Rosário4, Catherine A W Sullivan5, Abha R Gupta6, Ellen J Hoffman2, Manmeet Virdee2, Emily Olfson2, Sarah B Abdallah2, A Jeremy Willsey7, Roseli G Shavitt1, Euripedes C Miguel1, James L Kennedy3, Margaret A Richter8, Thomas V Fernandez9.   

Abstract

BACKGROUND: Obsessive-compulsive disorder (OCD) is a debilitating neuropsychiatric disorder with a genetic risk component, yet identification of high-confidence risk genes has been challenging. In recent years, risk gene discovery in other complex psychiatric disorders has been achieved by studying rare de novo (DN) coding variants.
METHODS: We performed whole-exome sequencing in 222 OCD parent-child trios (184 trios after quality control), comparing DN variant frequencies with 777 previously sequenced unaffected trios. We estimated the contribution of DN mutations to OCD risk and the number of genes involved. Finally, we looked for gene enrichment in other datasets and canonical pathways.
RESULTS: DN likely gene disrupting and predicted damaging missense variants are enriched in OCD probands (rate ratio, 1.52; p = .0005) and contribute to risk. We identified 2 high-confidence risk genes, each containing 2 DN damaging variants in unrelated probands: CHD8 and SCUBE1. We estimate that 34% of DN damaging variants in OCD contribute to risk and that DN damaging variants in approximately 335 genes contribute to risk in 22% of OCD cases. Furthermore, genes harboring DN damaging variants in OCD are enriched for those reported in neurodevelopmental disorders, particularly Tourette's disorder and autism spectrum disorder. An exploratory network analysis reveals significant functional connectivity and enrichment in canonical pathways, biological processes, and disease networks.
CONCLUSIONS: Our findings show a pathway toward systematic gene discovery in OCD via identification of DN damaging variants. Sequencing larger cohorts of OCD parent-child trios will reveal more OCD risk genes and will provide needed insights into underlying disease biology.
Copyright © 2019 Society of Biological Psychiatry. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Autism; CHD8; Obsessive-compulsive disorder; SCUBE1; Tourette; Whole-exome sequencing

Mesh:

Substances:

Year:  2019        PMID: 31771860      PMCID: PMC7160031          DOI: 10.1016/j.biopsych.2019.09.029

Source DB:  PubMed          Journal:  Biol Psychiatry        ISSN: 0006-3223            Impact factor:   13.382


  62 in total

1.  De Novo Coding Variants Are Strongly Associated with Tourette Disorder.

Authors:  A Jeremy Willsey; Thomas V Fernandez; Dongmei Yu; Robert A King; Andrea Dietrich; Jinchuan Xing; Stephan J Sanders; Jeffrey D Mandell; Alden Y Huang; Petra Richer; Louw Smith; Shan Dong; Kaitlin E Samocha; Benjamin M Neale; Giovanni Coppola; Carol A Mathews; Jay A Tischfield; Jeremiah M Scharf; Matthew W State; Gary A Heiman
Journal:  Neuron       Date:  2017-05-03       Impact factor: 17.173

2.  Cerebrospinal fluid cytokines in pediatric neuropsychiatric disease.

Authors:  B B Mittleman; F X Castellanos; L K Jacobsen; J L Rapoport; S E Swedo; G M Shearer
Journal:  J Immunol       Date:  1997-09-15       Impact factor: 5.422

3.  A 40-year follow-up of patients with obsessive-compulsive disorder [see commetns].

Authors:  G Skoog; I Skoog
Journal:  Arch Gen Psychiatry       Date:  1999-02

4.  The contribution of de novo coding mutations to autism spectrum disorder.

Authors:  Ivan Iossifov; Brian J O'Roak; Stephan J Sanders; Michael Ronemus; Niklas Krumm; Dan Levy; Holly A Stessman; Kali T Witherspoon; Laura Vives; Karynne E Patterson; Joshua D Smith; Bryan Paeper; Deborah A Nickerson; Jeanselle Dea; Shan Dong; Luis E Gonzalez; Jeffrey D Mandell; Shrikant M Mane; Michael T Murtha; Catherine A Sullivan; Michael F Walker; Zainulabedin Waqar; Liping Wei; A Jeremy Willsey; Boris Yamrom; Yoon-ha Lee; Ewa Grabowska; Ertugrul Dalkic; Zihua Wang; Steven Marks; Peter Andrews; Anthony Leotta; Jude Kendall; Inessa Hakker; Julie Rosenbaum; Beicong Ma; Linda Rodgers; Jennifer Troge; Giuseppe Narzisi; Seungtai Yoon; Michael C Schatz; Kenny Ye; W Richard McCombie; Jay Shendure; Evan E Eichler; Matthew W State; Michael Wigler
Journal:  Nature       Date:  2014-10-29       Impact factor: 69.504

5.  Synaptic, transcriptional and chromatin genes disrupted in autism.

Authors:  Silvia De Rubeis; Xin He; Arthur P Goldberg; Christopher S Poultney; Kaitlin Samocha; A Erucment Cicek; Yan Kou; Li Liu; Menachem Fromer; Susan Walker; Tarinder Singh; Lambertus Klei; Jack Kosmicki; Fu Shih-Chen; Branko Aleksic; Monica Biscaldi; Patrick F Bolton; Jessica M Brownfeld; Jinlu Cai; Nicholas G Campbell; Angel Carracedo; Maria H Chahrour; Andreas G Chiocchetti; Hilary Coon; Emily L Crawford; Sarah R Curran; Geraldine Dawson; Eftichia Duketis; Bridget A Fernandez; Louise Gallagher; Evan Geller; Stephen J Guter; R Sean Hill; Juliana Ionita-Laza; Patricia Jimenz Gonzalez; Helena Kilpinen; Sabine M Klauck; Alexander Kolevzon; Irene Lee; Irene Lei; Jing Lei; Terho Lehtimäki; Chiao-Feng Lin; Avi Ma'ayan; Christian R Marshall; Alison L McInnes; Benjamin Neale; Michael J Owen; Noriio Ozaki; Mara Parellada; Jeremy R Parr; Shaun Purcell; Kaija Puura; Deepthi Rajagopalan; Karola Rehnström; Abraham Reichenberg; Aniko Sabo; Michael Sachse; Stephan J Sanders; Chad Schafer; Martin Schulte-Rüther; David Skuse; Christine Stevens; Peter Szatmari; Kristiina Tammimies; Otto Valladares; Annette Voran; Wang Li-San; Lauren A Weiss; A Jeremy Willsey; Timothy W Yu; Ryan K C Yuen; Edwin H Cook; Christine M Freitag; Michael Gill; Christina M Hultman; Thomas Lehner; Aaarno Palotie; Gerard D Schellenberg; Pamela Sklar; Matthew W State; James S Sutcliffe; Christiopher A Walsh; Stephen W Scherer; Michael E Zwick; Jeffrey C Barett; David J Cutler; Kathryn Roeder; Bernie Devlin; Mark J Daly; Joseph D Buxbaum
Journal:  Nature       Date:  2014-10-29       Impact factor: 49.962

6.  Uncovering obsessive-compulsive disorder risk genes in a pediatric cohort by high-resolution analysis of copy number variation.

Authors:  Matthew J Gazzellone; Mehdi Zarrei; Christie L Burton; Susan Walker; Mohammed Uddin; S M Shaheen; Julie Coste; Rageen Rajendram; Reva J Schachter; Marlena Colasanto; Gregory L Hanna; David R Rosenberg; Noam Soreni; Kate D Fitzgerald; Christian R Marshall; Janet A Buchanan; Daniele Merico; Paul D Arnold; Stephen W Scherer
Journal:  J Neurodev Disord       Date:  2016-10-18       Impact factor: 4.025

7.  De novo insertions and deletions of predominantly paternal origin are associated with autism spectrum disorder.

Authors:  Shan Dong; Michael F Walker; Nicholas J Carriero; Michael DiCola; A Jeremy Willsey; Adam Y Ye; Zainulabedin Waqar; Luis E Gonzalez; John D Overton; Stephanie Frahm; John F Keaney; Nicole A Teran; Jeanselle Dea; Jeffrey D Mandell; Vanessa Hus Bal; Catherine A Sullivan; Nicholas M DiLullo; Rehab O Khalil; Jake Gockley; Zafer Yuksel; Sinem M Sertel; A Gulhan Ercan-Sencicek; Abha R Gupta; Shrikant M Mane; Michael Sheldon; Andrew I Brooks; Kathryn Roeder; Bernie Devlin; Matthew W State; Liping Wei; Stephan J Sanders
Journal:  Cell Rep       Date:  2014-10-02       Impact factor: 9.995

8.  De novo mutations in epileptic encephalopathies.

Authors:  Andrew S Allen; Samuel F Berkovic; Patrick Cossette; Norman Delanty; Dennis Dlugos; Evan E Eichler; Michael P Epstein; Tracy Glauser; David B Goldstein; Yujun Han; Erin L Heinzen; Yuki Hitomi; Katherine B Howell; Michael R Johnson; Ruben Kuzniecky; Daniel H Lowenstein; Yi-Fan Lu; Maura R Z Madou; Anthony G Marson; Heather C Mefford; Sahar Esmaeeli Nieh; Terence J O'Brien; Ruth Ottman; Slavé Petrovski; Annapurna Poduri; Elizabeth K Ruzzo; Ingrid E Scheffer; Elliott H Sherr; Christopher J Yuskaitis; Bassel Abou-Khalil; Brian K Alldredge; Jocelyn F Bautista; Samuel F Berkovic; Alex Boro; Gregory D Cascino; Damian Consalvo; Patricia Crumrine; Orrin Devinsky; Dennis Dlugos; Michael P Epstein; Miguel Fiol; Nathan B Fountain; Jacqueline French; Daniel Friedman; Eric B Geller; Tracy Glauser; Simon Glynn; Sheryl R Haut; Jean Hayward; Sandra L Helmers; Sucheta Joshi; Andres Kanner; Heidi E Kirsch; Robert C Knowlton; Eric H Kossoff; Rachel Kuperman; Ruben Kuzniecky; Daniel H Lowenstein; Shannon M McGuire; Paul V Motika; Edward J Novotny; Ruth Ottman; Juliann M Paolicchi; Jack M Parent; Kristen Park; Annapurna Poduri; Ingrid E Scheffer; Renée A Shellhaas; Elliott H Sherr; Jerry J Shih; Rani Singh; Joseph Sirven; Michael C Smith; Joseph Sullivan; Liu Lin Thio; Anu Venkat; Eileen P G Vining; Gretchen K Von Allmen; Judith L Weisenberg; Peter Widdess-Walsh; Melodie R Winawer
Journal:  Nature       Date:  2013-08-11       Impact factor: 49.962

9.  The Tourette International Collaborative Genetics (TIC Genetics) study, finding the genes causing Tourette syndrome: objectives and methods.

Authors:  Andrea Dietrich; Thomas V Fernandez; Robert A King; Matthew W State; Jay A Tischfield; Pieter J Hoekstra; Gary A Heiman
Journal:  Eur Child Adolesc Psychiatry       Date:  2014-04-26       Impact factor: 4.785

10.  Exon-focused genome-wide association study of obsessive-compulsive disorder and shared polygenic risk with schizophrenia.

Authors:  J Costas; N Carrera; P Alonso; X Gurriarán; C Segalàs; E Real; C López-Solà; S Mas; P Gassó; L Domènech; M Morell; I Quintela; L Lázaro; J M Menchón; X Estivill; Á Carracedo
Journal:  Transl Psychiatry       Date:  2016-03-29       Impact factor: 6.222

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Review 2.  The prefrontal cortex and OCD.

Authors:  Susanne E Ahmari; Scott L Rauch
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Review 3.  Pharmacotherapeutic Strategies and New Targets in OCD.

Authors:  Christopher Pittenger
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Review 4.  Pleiotropy and Cross-Disorder Genetics Among Psychiatric Disorders.

Authors:  Phil H Lee; Yen-Chen A Feng; Jordan W Smoller
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5.  Exome sequencing in obsessive-compulsive disorder reveals a burden of rare damaging coding variants.

Authors:  Gerald Nestadt; David B Goldstein; Mathew Halvorsen; Jack Samuels; Ying Wang; Benjamin D Greenberg; Abby J Fyer; James T McCracken; Daniel A Geller; James A Knowles; Anthony W Zoghbi; Tess D Pottinger; Marco A Grados; Mark A Riddle; O Joseph Bienvenu; Paul S Nestadt; Janice Krasnow; Fernando S Goes; Brion Maher
Journal:  Nat Neurosci       Date:  2021-06-28       Impact factor: 24.884

6.  DECO: a framework for jointly analyzing de novo and rare case/control variants, and biological pathways.

Authors:  Tan-Hoang Nguyen; Xin He; Ruth C Brown; Bradley T Webb; Kenneth S Kendler; Vladimir I Vladimirov; Brien P Riley; Silviu-Alin Bacanu
Journal:  Brief Bioinform       Date:  2021-09-02       Impact factor: 11.622

Review 7.  Autism Spectrum Disorder Genetics and the Search for Pathological Mechanisms.

Authors:  Devanand S Manoli; Matthew W State
Journal:  Am J Psychiatry       Date:  2021-01-01       Impact factor: 18.112

Review 8.  Xenopus leads the way: Frogs as a pioneering model to understand the human brain.

Authors:  Cameron R T Exner; Helen Rankin Willsey
Journal:  Genesis       Date:  2020-12-27       Impact factor: 2.487

Review 9.  Genotype-phenotype correlation in Phelan-McDermid syndrome: A comprehensive review of chromosome 22q13 deleted genes.

Authors:  Arianna Ricciardello; Pasquale Tomaiuolo; Antonio M Persico
Journal:  Am J Med Genet A       Date:  2021-05-05       Impact factor: 2.802

Review 10.  Developmental Considerations in Obsessive Compulsive Disorder: Comparing Pediatric and Adult-Onset Cases.

Authors:  Daniel A Geller; Saffron Homayoun; Gabrielle Johnson
Journal:  Front Psychiatry       Date:  2021-06-14       Impact factor: 4.157

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