Literature DB >> 33384012

Autism Spectrum Disorder Genetics and the Search for Pathological Mechanisms.

Devanand S Manoli1, Matthew W State1.   

Abstract

Recent progress in the identification of genes and genomic regions contributing to autism spectrum disorder (ASD) has had a broad impact on our understanding of the nature of genetic risk for a range of psychiatric disorders, on our understanding of ASD biology, and on defining the key challenges now facing the field in efforts to translate gene discovery into an actionable understanding of pathology. While these advances have not yet had a transformative impact on clinical practice, there is nonetheless cause for real optimism: reliable lists of risk genes are large and growing rapidly; the identified encoded proteins have already begun to point to a relatively small number of areas of biology, where parallel advances in neuroscience and functional genomics are yielding profound insights; there is strong evidence pointing to mid-fetal prefrontal cortical development as one nexus of vulnerability for some of the largest-effect ASD risk genes; and there are multiple plausible paths forward toward rational therapeutics development that, while admittedly challenging, constitute fundamental departures from what was possible prior to the era of successful gene discovery.

Entities:  

Keywords:  Autism Spectrum Disorder; Genetics/Genomics; Neurodevelopmental Disorders

Mesh:

Year:  2021        PMID: 33384012      PMCID: PMC8163016          DOI: 10.1176/appi.ajp.2020.20111608

Source DB:  PubMed          Journal:  Am J Psychiatry        ISSN: 0002-953X            Impact factor:   18.112


  84 in total

1.  De novo rates and selection of large copy number variation.

Authors:  Andy Itsara; Hao Wu; Joshua D Smith; Deborah A Nickerson; Isabelle Romieu; Stephanie J London; Evan E Eichler
Journal:  Genome Res       Date:  2010-09-14       Impact factor: 9.043

2.  Genome-wide de novo risk score implicates promoter variation in autism spectrum disorder.

Authors:  Joon-Yong An; Kevin Lin; Lingxue Zhu; Donna M Werling; Shan Dong; Harrison Brand; Harold Z Wang; Xuefang Zhao; Grace B Schwartz; Ryan L Collins; Benjamin B Currall; Claudia Dastmalchi; Jeanselle Dea; Clif Duhn; Michael C Gilson; Lambertus Klei; Lindsay Liang; Eirene Markenscoff-Papadimitriou; Sirisha Pochareddy; Nadav Ahituv; Joseph D Buxbaum; Hilary Coon; Mark J Daly; Young Shin Kim; Gabor T Marth; Benjamin M Neale; Aaron R Quinlan; John L Rubenstein; Nenad Sestan; Matthew W State; A Jeremy Willsey; Michael E Talkowski; Bernie Devlin; Kathryn Roeder; Stephan J Sanders
Journal:  Science       Date:  2018-12-14       Impact factor: 47.728

Review 3.  Lessons learned from studying syndromic autism spectrum disorders.

Authors:  Yehezkel Sztainberg; Huda Y Zoghbi
Journal:  Nat Neurosci       Date:  2016-10-26       Impact factor: 24.884

4.  De novo mutations revealed by whole-exome sequencing are strongly associated with autism.

Authors:  Stephan J Sanders; Michael T Murtha; Abha R Gupta; John D Murdoch; Melanie J Raubeson; A Jeremy Willsey; A Gulhan Ercan-Sencicek; Nicholas M DiLullo; Neelroop N Parikshak; Jason L Stein; Michael F Walker; Gordon T Ober; Nicole A Teran; Youeun Song; Paul El-Fishawy; Ryan C Murtha; Murim Choi; John D Overton; Robert D Bjornson; Nicholas J Carriero; Kyle A Meyer; Kaya Bilguvar; Shrikant M Mane; Nenad Sestan; Richard P Lifton; Murat Günel; Kathryn Roeder; Daniel H Geschwind; Bernie Devlin; Matthew W State
Journal:  Nature       Date:  2012-04-04       Impact factor: 49.962

Review 5.  Effects of sex chromosome aneuploidies on brain development: evidence from neuroimaging studies.

Authors:  Rhoshel K Lenroot; Nancy Raitano Lee; Jay N Giedd
Journal:  Dev Disabil Res Rev       Date:  2009

6.  Modeling transformations of neurodevelopmental sequences across mammalian species.

Authors:  Alan D Workman; Christine J Charvet; Barbara Clancy; Richard B Darlington; Barbara L Finlay
Journal:  J Neurosci       Date:  2013-04-24       Impact factor: 6.167

7.  Sporadic autism exomes reveal a highly interconnected protein network of de novo mutations.

Authors:  Brian J O'Roak; Laura Vives; Santhosh Girirajan; Emre Karakoc; Niklas Krumm; Bradley P Coe; Roie Levy; Arthur Ko; Choli Lee; Joshua D Smith; Emily H Turner; Ian B Stanaway; Benjamin Vernot; Maika Malig; Carl Baker; Beau Reilly; Joshua M Akey; Elhanan Borenstein; Mark J Rieder; Deborah A Nickerson; Raphael Bernier; Jay Shendure; Evan E Eichler
Journal:  Nature       Date:  2012-04-04       Impact factor: 49.962

8.  DAWN: a framework to identify autism genes and subnetworks using gene expression and genetics.

Authors:  Li Liu; Jing Lei; Stephan J Sanders; Arthur Jeremy Willsey; Yan Kou; Abdullah Ercument Cicek; Lambertus Klei; Cong Lu; Xin He; Mingfeng Li; Rebecca A Muhle; Avi Ma'ayan; James P Noonan; Nenad Sestan; Kathryn A McFadden; Matthew W State; Joseph D Buxbaum; Bernie Devlin; Kathryn Roeder
Journal:  Mol Autism       Date:  2014-03-06       Impact factor: 7.509

9.  Rare loss-of-function variants in SETD1A are associated with schizophrenia and developmental disorders.

Authors:  Tarjinder Singh; Mitja I Kurki; David Curtis; Shaun M Purcell; Lucy Crooks; Jeremy McRae; Jaana Suvisaari; Himanshu Chheda; Douglas Blackwood; Gerome Breen; Olli Pietiläinen; Sebastian S Gerety; Muhammad Ayub; Moira Blyth; Trevor Cole; David Collier; Eve L Coomber; Nick Craddock; Mark J Daly; John Danesh; Marta DiForti; Alison Foster; Nelson B Freimer; Daniel Geschwind; Mandy Johnstone; Shelagh Joss; Georg Kirov; Jarmo Körkkö; Outi Kuismin; Peter Holmans; Christina M Hultman; Conrad Iyegbe; Jouko Lönnqvist; Minna Männikkö; Steve A McCarroll; Peter McGuffin; Andrew M McIntosh; Andrew McQuillin; Jukka S Moilanen; Carmel Moore; Robin M Murray; Ruth Newbury-Ecob; Willem Ouwehand; Tiina Paunio; Elena Prigmore; Elliott Rees; David Roberts; Jennifer Sambrook; Pamela Sklar; David St Clair; Juha Veijola; James T R Walters; Hywel Williams; Patrick F Sullivan; Matthew E Hurles; Michael C O'Donovan; Aarno Palotie; Michael J Owen; Jeffrey C Barrett
Journal:  Nat Neurosci       Date:  2016-03-14       Impact factor: 24.884

10.  Integrated model of de novo and inherited genetic variants yields greater power to identify risk genes.

Authors:  Xin He; Stephan J Sanders; Li Liu; Silvia De Rubeis; Elaine T Lim; James S Sutcliffe; Gerard D Schellenberg; Richard A Gibbs; Mark J Daly; Joseph D Buxbaum; Matthew W State; Bernie Devlin; Kathryn Roeder
Journal:  PLoS Genet       Date:  2013-08-15       Impact factor: 5.917

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  12 in total

1.  TAU ablation in excitatory neurons and postnatal TAU knockdown reduce epilepsy, SUDEP, and autism behaviors in a Dravet syndrome model.

Authors:  Eric Shao; Che-Wei Chang; Zhiyong Li; Xinxing Yu; Kaitlyn Ho; Michelle Zhang; Xin Wang; Jeffrey Simms; Iris Lo; Jessica Speckart; Julia Holtzman; Gui-Qiu Yu; Erik D Roberson; Lennart Mucke
Journal:  Sci Transl Med       Date:  2022-04-27       Impact factor: 19.319

2.  Prenatal exposure to valproic acid alters Reelin, NGF expressing neuron architecture and impairs social interaction in their autistic-like phenotype male offspring.

Authors:  Karunanithi Sivasangari; Koilmani Emmanuvel Rajan
Journal:  Exp Brain Res       Date:  2022-06-01       Impact factor: 2.064

Review 3.  The cell biology of synapse formation.

Authors:  Thomas C Südhof
Journal:  J Cell Biol       Date:  2021-06-04       Impact factor: 10.539

Review 4.  The Gut-Brain-Microbiome Axis and Its Link to Autism: Emerging Insights and the Potential of Zebrafish Models.

Authors:  David M James; Elizabeth A Davidson; Julio Yanes; Baharak Moshiree; Julia E Dallman
Journal:  Front Cell Dev Biol       Date:  2021-04-15

Review 5.  Understanding autism spectrum disorders with animal models: applications, insights, and perspectives.

Authors:  Zhu Li; Yuan-Xiang Zhu; Li-Jun Gu; Ying Cheng
Journal:  Zool Res       Date:  2021-11-18

6.  Genetic counseling as preventive intervention: toward individual specification of transgenerational autism risk.

Authors:  Natasha Marrus; Tychele N Turner; Elizabeth Forsen; Drew Bolster; Alison Marvin; Andrew Whitehouse; Laura Klinger; Christina A Gurnett; J N Constantino
Journal:  J Neurodev Disord       Date:  2021-09-16       Impact factor: 4.025

Review 7.  Varied Composition and Underlying Mechanisms of Gut Microbiome in Neuroinflammation.

Authors:  Rai Khalid Farooq; Widyan Alamoudi; Amani Alhibshi; Suriya Rehman; Ashish Ranjan Sharma; Fuad A Abdulla
Journal:  Microorganisms       Date:  2022-03-25

8.  SNP-PCR genotyping links alterations in the GABAA receptor (GABRG3: rs208129) and RELN (rs73670) genes to autism spectrum disorder among peadiatric Iraqi Arabs.

Authors:  Zainab A Ali; Akeel A Yasseen; Katherine A McAllister; Arafat Al-Dujailli; Ahmed J Al-Karaqully; Alaa S Jumaah
Journal:  Mol Biol Rep       Date:  2022-04-11       Impact factor: 2.742

9.  Early postnatal serotonin modulation prevents adult-stage deficits in Arid1b-deficient mice through synaptic transcriptional reprogramming.

Authors:  Hyosang Kim; Doyoun Kim; Yisul Cho; Kyungdeok Kim; Junyeop Daniel Roh; Yangsik Kim; Esther Yang; Seong Soon Kim; Sunjoo Ahn; Hyun Kim; Hyojin Kang; Yongchul Bae; Eunjoon Kim
Journal:  Nat Commun       Date:  2022-08-27       Impact factor: 17.694

Review 10.  Dendritic Integration Dysfunction in Neurodevelopmental Disorders.

Authors:  Andrew D Nelson; Kevin J Bender
Journal:  Dev Neurosci       Date:  2021-06-17       Impact factor: 3.421

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