Literature DB >> 34183866

Exome sequencing in obsessive-compulsive disorder reveals a burden of rare damaging coding variants.

Gerald Nestadt1, David B Goldstein2, Mathew Halvorsen3, Jack Samuels4, Ying Wang5, Benjamin D Greenberg6, Abby J Fyer7, James T McCracken8, Daniel A Geller9, James A Knowles10, Anthony W Zoghbi7,11, Tess D Pottinger11, Marco A Grados4, Mark A Riddle4, O Joseph Bienvenu4, Paul S Nestadt4, Janice Krasnow4, Fernando S Goes4, Brion Maher12.   

Abstract

Obsessive-compulsive disorder (OCD) affects 1-2% of the population, and, as with other complex neuropsychiatric disorders, it is thought that rare variation contributes to its genetic risk. In this study, we performed exome sequencing in the largest OCD cohort to date (1,313 total cases, consisting of 587 trios, 41 quartets and 644 singletons of affected individuals) and describe contributions to disease risk from rare damaging coding variants. In case-control analyses (n = 1,263/11,580), the most significant single-gene result was observed in SLITRK5 (odds ratio (OR) = 8.8, 95% confidence interval 3.4-22.5, P = 2.3 × 10-6). Across the exome, there was an excess of loss of function (LoF) variation specifically within genes that are LoF-intolerant (OR = 1.33, P = 0.01). In an analysis of trios, we observed an excess of de novo missense predicted damaging variants relative to controls (OR = 1.22, P = 0.02), alongside an excess of de novo LoF mutations in LoF-intolerant genes (OR = 2.55, P = 7.33 × 10-3). These data support a contribution of rare coding variants to OCD genetic risk.
© 2021. The Author(s), under exclusive licence to Springer Nature America, Inc.

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Year:  2021        PMID: 34183866     DOI: 10.1038/s41593-021-00876-8

Source DB:  PubMed          Journal:  Nat Neurosci        ISSN: 1097-6256            Impact factor:   24.884


  36 in total

1.  De Novo Coding Variants Are Strongly Associated with Tourette Disorder.

Authors:  A Jeremy Willsey; Thomas V Fernandez; Dongmei Yu; Robert A King; Andrea Dietrich; Jinchuan Xing; Stephan J Sanders; Jeffrey D Mandell; Alden Y Huang; Petra Richer; Louw Smith; Shan Dong; Kaitlin E Samocha; Benjamin M Neale; Giovanni Coppola; Carol A Mathews; Jay A Tischfield; Jeremiah M Scharf; Matthew W State; Gary A Heiman
Journal:  Neuron       Date:  2017-05-03       Impact factor: 17.173

Review 2.  The effect of vitamin D on absorption of calcium and the template activity of chromatin in intestines of rats and chicks.

Authors: 
Journal:  Nutr Rev       Date:  1970-01       Impact factor: 7.110

Review 3.  Genetics of obsessive-compulsive disorder.

Authors:  Gerald Nestadt; Marco Grados; Jack F Samuels
Journal:  Psychiatr Clin North Am       Date:  2010-03

4.  Meta-analysis of the heritability of human traits based on fifty years of twin studies.

Authors:  Tinca J C Polderman; Beben Benyamin; Christiaan A de Leeuw; Patrick F Sullivan; Arjen van Bochoven; Peter M Visscher; Danielle Posthuma
Journal:  Nat Genet       Date:  2015-05-18       Impact factor: 38.330

5.  A method and server for predicting damaging missense mutations.

Authors:  Ivan A Adzhubei; Steffen Schmidt; Leonid Peshkin; Vasily E Ramensky; Anna Gerasimova; Peer Bork; Alexey S Kondrashov; Shamil R Sunyaev
Journal:  Nat Methods       Date:  2010-04       Impact factor: 28.547

6.  De Novo Damaging DNA Coding Mutations Are Associated With Obsessive-Compulsive Disorder and Overlap With Tourette's Disorder and Autism.

Authors:  Carolina Cappi; Melody E Oliphant; Zsanett Péter; Gwyneth Zai; Maria Conceição do Rosário; Catherine A W Sullivan; Abha R Gupta; Ellen J Hoffman; Manmeet Virdee; Emily Olfson; Sarah B Abdallah; A Jeremy Willsey; Roseli G Shavitt; Euripedes C Miguel; James L Kennedy; Margaret A Richter; Thomas V Fernandez
Journal:  Biol Psychiatry       Date:  2019-10-16       Impact factor: 13.382

7.  A map of constrained coding regions in the human genome.

Authors:  James M Havrilla; Brent S Pedersen; Ryan M Layer; Aaron R Quinlan
Journal:  Nat Genet       Date:  2018-12-10       Impact factor: 38.330

8.  Genome-wide association study in obsessive-compulsive disorder: results from the OCGAS.

Authors:  M Mattheisen; J F Samuels; Y Wang; B D Greenberg; A J Fyer; J T McCracken; D A Geller; D L Murphy; J A Knowles; M A Grados; M A Riddle; S A Rasmussen; N C McLaughlin; E L Nurmi; K D Askland; H-D Qin; B A Cullen; J Piacentini; D L Pauls; O J Bienvenu; S E Stewart; K-Y Liang; F S Goes; B Maher; A E Pulver; Y Y Shugart; D Valle; C Lange; G Nestadt
Journal:  Mol Psychiatry       Date:  2014-05-13       Impact factor: 15.992

9.  De Novo Sequence and Copy Number Variants Are Strongly Associated with Tourette Disorder and Implicate Cell Polarity in Pathogenesis.

Authors:  Sheng Wang; Jeffrey D Mandell; Yogesh Kumar; Nawei Sun; Montana T Morris; Juan Arbelaez; Cara Nasello; Shan Dong; Clif Duhn; Xin Zhao; Zhiyu Yang; Shanmukha S Padmanabhuni; Dongmei Yu; Robert A King; Andrea Dietrich; Najah Khalifa; Niklas Dahl; Alden Y Huang; Benjamin M Neale; Giovanni Coppola; Carol A Mathews; Jeremiah M Scharf; Thomas V Fernandez; Joseph D Buxbaum; Silvia De Rubeis; Dorothy E Grice; Jinchuan Xing; Gary A Heiman; Jay A Tischfield; Peristera Paschou; A Jeremy Willsey; Matthew W State
Journal:  Cell Rep       Date:  2018-09-25       Impact factor: 9.995

10.  Genome-wide association study of obsessive-compulsive disorder.

Authors:  S E Stewart; D Yu; J M Scharf; B M Neale; J A Fagerness; C A Mathews; P D Arnold; P D Evans; E R Gamazon; L K Davis; L Osiecki; L McGrath; S Haddad; J Crane; D Hezel; C Illman; C Mayerfeld; A Konkashbaev; C Liu; A Pluzhnikov; A Tikhomirov; C K Edlund; S L Rauch; R Moessner; P Falkai; W Maier; S Ruhrmann; H-J Grabe; L Lennertz; M Wagner; L Bellodi; M C Cavallini; M A Richter; E H Cook; J L Kennedy; D Rosenberg; D J Stein; S M J Hemmings; C Lochner; A Azzam; D A Chavira; E Fournier; H Garrido; B Sheppard; P Umaña; D L Murphy; J R Wendland; J Veenstra-VanderWeele; D Denys; R Blom; D Deforce; F Van Nieuwerburgh; H G M Westenberg; S Walitza; K Egberts; T Renner; E C Miguel; C Cappi; A G Hounie; M Conceição do Rosário; A S Sampaio; H Vallada; H Nicolini; N Lanzagorta; B Camarena; R Delorme; M Leboyer; C N Pato; M T Pato; E Voyiaziakis; P Heutink; D C Cath; D Posthuma; J H Smit; J Samuels; O J Bienvenu; B Cullen; A J Fyer; M A Grados; B D Greenberg; J T McCracken; M A Riddle; Y Wang; V Coric; J F Leckman; M Bloch; C Pittenger; V Eapen; D W Black; R A Ophoff; E Strengman; D Cusi; M Turiel; F Frau; F Macciardi; J R Gibbs; M R Cookson; A Singleton; J Hardy; A T Crenshaw; M A Parkin; D B Mirel; D V Conti; S Purcell; G Nestadt; G L Hanna; M A Jenike; J A Knowles; N Cox; D L Pauls
Journal:  Mol Psychiatry       Date:  2012-08-14       Impact factor: 15.992

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Review 3.  Gene-based therapeutics for rare genetic neurodevelopmental psychiatric disorders.

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4.  Exploring Association Between Serotonin and Neurogenesis Related Genes in Obsessive-Compulsive Disorder in Chinese Han People: Promising Association Between DMRT2, miR-30a-5p, and Early-Onset Patients.

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Journal:  Front Psychiatry       Date:  2022-05-13       Impact factor: 5.435

5.  High-impact rare genetic variants in severe schizophrenia.

Authors:  Anthony W Zoghbi; Ryan S Dhindsa; Terry E Goldberg; Aydan Mehralizade; Joshua E Motelow; Xinchen Wang; Anna Alkelai; Matthew B Harms; Jeffrey A Lieberman; Sander Markx; David B Goldstein
Journal:  Proc Natl Acad Sci U S A       Date:  2021-12-21       Impact factor: 12.779

6.  Whole-exome DNA sequencing in childhood anxiety disorders identifies rare de novo damaging coding variants.

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Review 7.  The Role of SliTrk5 in Central Nervous System.

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