Literature DB >> 31745995

CT prostate segmentation based on synthetic MRI-aided deep attention fully convolution network.

Yang Lei1, Xue Dong1, Zhen Tian1, Yingzi Liu1, Sibo Tian1, Tonghe Wang1, Xiaojun Jiang1, Pretesh Patel1, Ashesh B Jani1, Hui Mao2, Walter J Curran1, Tian Liu1, Xiaofeng Yang1.   

Abstract

PURPOSE: Accurate segmentation of the prostate on computed tomography (CT) for treatment planning is challenging due to CT's poor soft tissue contrast. Magnetic resonance imaging (MRI) has been used to aid prostate delineation, but its final accuracy is limited by MRI-CT registration errors. We developed a deep attention-based segmentation strategy on CT-based synthetic MRI (sMRI) to deal with the CT prostate delineation challenge without MRI acquisition. METHODS AND MATERIALS: We developed a prostate segmentation strategy which employs an sMRI-aided deep attention network to accurately segment the prostate on CT. Our method consists of three major steps. First, a cycle generative adversarial network was used to estimate an sMRI from CT images. Second, a deep attention fully convolution network was trained based on sMRI and the prostate contours deformed from MRIs. Attention models were introduced to pay more attention to prostate boundary. The prostate contour for a query patient was obtained by feeding the patient's CT images into the trained sMRI generation model and segmentation model.
RESULTS: The segmentation technique was validated with a clinical study of 49 patients by leave-one-out experiments and validated with an additional 50 patients by hold-out test. The Dice similarity coefficient, Hausdorff distance, and mean surface distance indices between our segmented and deformed MRI-defined prostate manual contours were 0.92 ± 0.09, 4.38 ± 4.66, and 0.62 ± 0.89 mm, respectively, with leave-one-out experiments, and were 0.91 ± 0.07, 4.57 ± 3.03, and 0.62 ± 0.65 mm, respectively, with hold-out test.
CONCLUSIONS: We have proposed a novel CT-only prostate segmentation strategy using CT-based sMRI, and validated its accuracy against the prostate contours that were manually drawn on MRI images and deformed to CT images. This technique could provide accurate prostate volume for treatment planning without requiring MRI acquisition, greatly facilitating the routine clinical workflow.
© 2019 American Association of Physicists in Medicine.

Entities:  

Keywords:  CT-based synthetic MRI; computed tomography; deep attention network; prostate segmentation

Mesh:

Year:  2019        PMID: 31745995      PMCID: PMC7764436          DOI: 10.1002/mp.13933

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


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