Literature DB >> 31670139

Mitigating gyral bias in cortical tractography via asymmetric fiber orientation distributions.

Ye Wu1, Yoonmi Hong2, Yuanjing Feng3, Dinggang Shen4, Pew-Thian Yap5.   

Abstract

Diffusion tractography in brain connectomics often involves tracing axonal trajectories across gray-white matter boundaries in gyral blades of complex cortical convolutions. To date, gyral bias is observed in most tractography algorithms with streamlines predominantly terminating at gyral crowns instead of sulcal banks. This work demonstrates that asymmetric fiber orientation distribution functions (AFODFs), computed via a multi-tissue global estimation framework, can mitigate the effects of gyral bias, enabling fiber streamlines at gyral blades to make sharper turns into the cortical gray matter. We use ex-vivo data of an adult rhesus macaque and in-vivo data from the Human Connectome Project (HCP) to show that the fiber streamlines given by AFODFs bend more naturally into the cortex than the conventional symmetric FODFs in typical gyral blades. We demonstrate that AFODF tractography improves cortico-cortical connectivity and provides highly consistent outcomes between two different field strengths (3T and 7T).
Copyright © 2019 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Asymmetric fiber orientation distribution; Diffusion MRI; Gyral bias; Tractography

Mesh:

Year:  2019        PMID: 31670139      PMCID: PMC6935166          DOI: 10.1016/j.media.2019.101543

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  37 in total

1.  Starting at the beginning: an introduction to coefficient alpha and internal consistency.

Authors:  David L Streiner
Journal:  J Pers Assess       Date:  2003-02

2.  Track-density imaging (TDI): super-resolution white matter imaging using whole-brain track-density mapping.

Authors:  Fernando Calamante; Jacques-Donald Tournier; Graeme D Jackson; Alan Connelly
Journal:  Neuroimage       Date:  2010-07-17       Impact factor: 6.556

3.  Direct estimation of the fiber orientation density function from diffusion-weighted MRI data using spherical deconvolution.

Authors:  J-Donald Tournier; Fernando Calamante; David G Gadian; Alan Connelly
Journal:  Neuroimage       Date:  2004-11       Impact factor: 6.556

4.  Tractometer: towards validation of tractography pipelines.

Authors:  Marc-Alexandre Côté; Gabriel Girard; Arnaud Boré; Eleftherios Garyfallidis; Jean-Christophe Houde; Maxime Descoteaux
Journal:  Med Image Anal       Date:  2013-04-25       Impact factor: 8.545

5.  Structured sparsity for spatially coherent fibre orientation estimation in diffusion MRI.

Authors:  A Auría; A Daducci; J-P Thiran; Y Wiaux
Journal:  Neuroimage       Date:  2015-05-02       Impact factor: 6.556

6.  Superficial white matter fiber systems impede detection of long-range cortical connections in diffusion MR tractography.

Authors:  Colin Reveley; Anil K Seth; Carlo Pierpaoli; Afonso C Silva; David Yu; Richard C Saunders; David A Leopold; Frank Q Ye
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-11       Impact factor: 11.205

7.  Joint spatial-angular sparse coding for dMRI with separable dictionaries.

Authors:  Evan Schwab; René Vidal; Nicolas Charon
Journal:  Med Image Anal       Date:  2018-05-25       Impact factor: 8.545

8.  k-space and q-space: combining ultra-high spatial and angular resolution in diffusion imaging using ZOOPPA at 7 T.

Authors:  Robin M Heidemann; Alfred Anwander; Thorsten Feiweier; Thomas R Knösche; Robert Turner
Journal:  Neuroimage       Date:  2012-01-09       Impact factor: 6.556

9.  Automatic parcellation of human cortical gyri and sulci using standard anatomical nomenclature.

Authors:  Christophe Destrieux; Bruce Fischl; Anders Dale; Eric Halgren
Journal:  Neuroimage       Date:  2010-06-12       Impact factor: 6.556

10.  Asymmetric Orientation Distribution Functions (AODFs) revealing intravoxel geometry in diffusion MRI.

Authors:  Suheyla Cetin Karayumak; Evren Özarslan; Gozde Unal
Journal:  Magn Reson Imaging       Date:  2018-03-14       Impact factor: 2.546

View more
  7 in total

1.  Active Cortex Tractography.

Authors:  Ye Wu; Yoonmi Hong; Sahar Ahmad; Pew-Thian Yap
Journal:  Med Image Comput Comput Assist Interv       Date:  2021-09-21

2.  Highly Reproducible Whole Brain Parcellation in Individuals via Voxel Annotation with Fiber Clusters.

Authors:  Ye Wu; Sahar Ahmad; Pew-Thian Yap
Journal:  Med Image Comput Comput Assist Interv       Date:  2021-09-21

Review 3.  Quantitative mapping of the brain's structural connectivity using diffusion MRI tractography: A review.

Authors:  Fan Zhang; Alessandro Daducci; Yong He; Simona Schiavi; Caio Seguin; Robert E Smith; Chun-Hung Yeh; Tengda Zhao; Lauren J O'Donnell
Journal:  Neuroimage       Date:  2022-01-01       Impact factor: 7.400

Review 4.  The Human Connectome Project: A retrospective.

Authors:  Jennifer Stine Elam; Matthew F Glasser; Michael P Harms; Stamatios N Sotiropoulos; Jesper L R Andersson; Gregory C Burgess; Sandra W Curtiss; Robert Oostenveld; Linda J Larson-Prior; Jan-Mathijs Schoffelen; Michael R Hodge; Eileen A Cler; Daniel M Marcus; Deanna M Barch; Essa Yacoub; Stephen M Smith; Kamil Ugurbil; David C Van Essen
Journal:  Neuroimage       Date:  2021-09-08       Impact factor: 7.400

5.  Modelling white matter in gyral blades as a continuous vector field.

Authors:  Michiel Cottaar; Matteo Bastiani; Nikhil Boddu; Matthew F Glasser; Suzanne Haber; David C van Essen; Stamatios N Sotiropoulos; Saad Jbabdi
Journal:  Neuroimage       Date:  2020-12-30       Impact factor: 6.556

6.  Insights from the IronTract challenge: Optimal methods for mapping brain pathways from multi-shell diffusion MRI.

Authors:  Chiara Maffei; Gabriel Girard; Kurt G Schilling; Dogu Baran Aydogan; Nagesh Adluru; Andrey Zhylka; Ye Wu; Matteo Mancini; Andac Hamamci; Alessia Sarica; Achille Teillac; Steven H Baete; Davood Karimi; Fang-Cheng Yeh; Mert E Yildiz; Ali Gholipour; Yann Bihan-Poudec; Bassem Hiba; Andrea Quattrone; Aldo Quattrone; Tommy Boshkovski; Nikola Stikov; Pew-Thian Yap; Alberto de Luca; Josien Pluim; Alexander Leemans; Vivek Prabhakaran; Barbara B Bendlin; Andrew L Alexander; Bennett A Landman; Erick J Canales-Rodríguez; Muhamed Barakovic; Jonathan Rafael-Patino; Thomas Yu; Gaëtan Rensonnet; Simona Schiavi; Alessandro Daducci; Marco Pizzolato; Elda Fischi-Gomez; Jean-Philippe Thiran; George Dai; Giorgia Grisot; Nikola Lazovski; Santi Puch; Marc Ramos; Paulo Rodrigues; Vesna Prčkovska; Robert Jones; Julia Lehman; Suzanne N Haber; Anastasia Yendiki
Journal:  Neuroimage       Date:  2022-05-26       Impact factor: 7.400

Review 7.  The sensitivity of diffusion MRI to microstructural properties and experimental factors.

Authors:  Maryam Afzali; Tomasz Pieciak; Sharlene Newman; Eleftherios Garyfallidis; Evren Özarslan; Hu Cheng; Derek K Jones
Journal:  J Neurosci Methods       Date:  2020-10-02       Impact factor: 2.390

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.