Literature DB >> 31630970

Loss of Dynamic RNA Interaction and Aberrant Phase Separation Induced by Two Distinct Types of ALS/FTD-Linked FUS Mutations.

Amirhossein Ghanbari Niaki1, Jaya Sarkar1, Xinyi Cai1, Kevin Rhine2, Velinda Vidaurre2, Brian Guy2, Miranda Hurst1, Jong Chan Lee3, Hye Ran Koh4, Lin Guo5, Charlotte M Fare6, James Shorter6, Sua Myong7.   

Abstract

FUS is a nuclear RNA-binding protein, and its cytoplasmic aggregation is a pathogenic signature of amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD). It remains unknown how the FUS-RNA interactions contribute to phase separation and whether its phase behavior is affected by ALS-linked mutations. Here we demonstrate that wild-type FUS binds single-stranded RNA stoichiometrically in a length-dependent manner and that multimers induce highly dynamic interactions with RNA, giving rise to small and fluid condensates. In contrast, mutations in arginine display a severely altered conformation, static binding to RNA, and formation of large condensates, signifying the role of arginine in driving proper RNA interaction. Glycine mutations undergo rapid loss of fluidity, emphasizing the role of glycine in promoting fluidity. Strikingly, the nuclear import receptor Karyopherin-β2 reverses the mutant defects and recovers the wild-type FUS behavior. We reveal two distinct mechanisms underpinning potentially disparate pathogenic pathways of ALS-linked FUS mutants.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  ALS/FTD; FUS mutation; Karyopherin-β2; RNA interaction; aberrant condensation; dynamic; fluidity; liquid liquid phase separation; single molecule FRET

Mesh:

Substances:

Year:  2019        PMID: 31630970      PMCID: PMC6943187          DOI: 10.1016/j.molcel.2019.09.022

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  52 in total

1.  mRNA structure determines specificity of a polyQ-driven phase separation.

Authors:  Erin M Langdon; Yupeng Qiu; Amirhossein Ghanbari Niaki; Grace A McLaughlin; Chase A Weidmann; Therese M Gerbich; Jean A Smith; John M Crutchley; Christina M Termini; Kevin M Weeks; Sua Myong; Amy S Gladfelter
Journal:  Science       Date:  2018-04-12       Impact factor: 47.728

2.  Divergent roles of ALS-linked proteins FUS/TLS and TDP-43 intersect in processing long pre-mRNAs.

Authors:  Clotilde Lagier-Tourenne; Magdalini Polymenidou; Kasey R Hutt; Anthony Q Vu; Michael Baughn; Stephanie C Huelga; Kevin M Clutario; Shuo-Chien Ling; Tiffany Y Liang; Curt Mazur; Edward Wancewicz; Aneeza S Kim; Andy Watt; Sue Freier; Geoffrey G Hicks; John Paul Donohue; Lily Shiue; C Frank Bennett; John Ravits; Don W Cleveland; Gene W Yeo
Journal:  Nat Neurosci       Date:  2012-09-30       Impact factor: 24.884

3.  Ubiquilin 2 modulates ALS/FTD-linked FUS-RNA complex dynamics and stress granule formation.

Authors:  Elizabeth J Alexander; Amirhossein Ghanbari Niaki; Tao Zhang; Jaya Sarkar; Yang Liu; Raja Sekhar Nirujogi; Akhilesh Pandey; Sua Myong; Jiou Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2018-11-15       Impact factor: 11.205

4.  ALS-associated fused in sarcoma (FUS) mutations disrupt Transportin-mediated nuclear import.

Authors:  Dorothee Dormann; Ramona Rodde; Dieter Edbauer; Eva Bentmann; Ingeborg Fischer; Alexander Hruscha; Manuel E Than; Ian R A Mackenzie; Anja Capell; Bettina Schmid; Manuela Neumann; Christian Haass
Journal:  EMBO J       Date:  2010-07-06       Impact factor: 11.598

5.  RNA-binding ability of FUS regulates neurodegeneration, cytoplasmic mislocalization and incorporation into stress granules associated with FUS carrying ALS-linked mutations.

Authors:  J Gavin Daigle; Nicholas A Lanson; Rebecca B Smith; Ian Casci; Astha Maltare; John Monaghan; Charles D Nichols; Dmitri Kryndushkin; Frank Shewmaker; Udai Bhan Pandey
Journal:  Hum Mol Genet       Date:  2012-12-20       Impact factor: 6.150

Review 6.  Converging mechanisms in ALS and FTD: disrupted RNA and protein homeostasis.

Authors:  Shuo-Chien Ling; Magdalini Polymenidou; Don W Cleveland
Journal:  Neuron       Date:  2013-08-07       Impact factor: 17.173

7.  Interaction of FUS and HDAC1 regulates DNA damage response and repair in neurons.

Authors:  Wen-Yuan Wang; Ling Pan; Susan C Su; Emma J Quinn; Megumi Sasaki; Jessica C Jimenez; Ian R A Mackenzie; Eric J Huang; Li-Huei Tsai
Journal:  Nat Neurosci       Date:  2013-09-15       Impact factor: 24.884

8.  RNA buffers the phase separation behavior of prion-like RNA binding proteins.

Authors:  Shovamayee Maharana; Jie Wang; Dimitrios K Papadopoulos; Doris Richter; Andrey Pozniakovsky; Ina Poser; Marc Bickle; Sandra Rizk; Jordina Guillén-Boixet; Titus M Franzmann; Marcus Jahnel; Lara Marrone; Young-Tae Chang; Jared Sterneckert; Pavel Tomancak; Anthony A Hyman; Simon Alberti
Journal:  Science       Date:  2018-04-12       Impact factor: 47.728

9.  Phase separation by low complexity domains promotes stress granule assembly and drives pathological fibrillization.

Authors:  Amandine Molliex; Jamshid Temirov; Jihun Lee; Maura Coughlin; Anderson P Kanagaraj; Hong Joo Kim; Tanja Mittag; J Paul Taylor
Journal:  Cell       Date:  2015-09-24       Impact factor: 41.582

10.  Repetitive RNA unwinding by RNA helicase A facilitates RNA annealing.

Authors:  Hye Ran Koh; Li Xing; Lawrence Kleiman; Sua Myong
Journal:  Nucleic Acids Res       Date:  2014-06-09       Impact factor: 16.971

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  45 in total

Review 1.  Generic nature of the condensed states of proteins.

Authors:  Monika Fuxreiter; Michele Vendruscolo
Journal:  Nat Cell Biol       Date:  2021-06-09       Impact factor: 28.824

Review 2.  Methods to Study Phase-Separated Condensates and the Underlying Molecular Interactions.

Authors:  Laura R Ganser; Sua Myong
Journal:  Trends Biochem Sci       Date:  2020-06-16       Impact factor: 13.807

Review 3.  Biomolecular condensates at the nexus of cellular stress, protein aggregation disease and ageing.

Authors:  Simon Alberti; Anthony A Hyman
Journal:  Nat Rev Mol Cell Biol       Date:  2021-01-28       Impact factor: 94.444

Review 4.  Nuclear-Import Receptors Counter Deleterious Phase Transitions in Neurodegenerative Disease.

Authors:  Hana M Odeh; Charlotte M Fare; James Shorter
Journal:  J Mol Biol       Date:  2021-08-28       Impact factor: 5.469

5.  Lysine acetylation regulates the RNA binding, subcellular localization and inclusion formation of FUS.

Authors:  Alexandra Arenas; Jing Chen; Lisha Kuang; Kelly R Barnett; Edward J Kasarskis; Jozsef Gal; Haining Zhu
Journal:  Hum Mol Genet       Date:  2020-09-29       Impact factor: 6.150

6.  Single-molecule and ensemble methods to probe RNP nucleation and condensate properties.

Authors:  Kevin Rhine; Sophie Skanchy; Sua Myong
Journal:  Methods       Date:  2021-02-19       Impact factor: 3.608

Review 7.  Combating deleterious phase transitions in neurodegenerative disease.

Authors:  April L Darling; James Shorter
Journal:  Biochim Biophys Acta Mol Cell Res       Date:  2021-02-05       Impact factor: 4.739

Review 8.  FUS and TDP-43 Phases in Health and Disease.

Authors:  Bede Portz; Bo Lim Lee; James Shorter
Journal:  Trends Biochem Sci       Date:  2021-01-11       Impact factor: 13.807

9.  Regeneration of PEG slide for multiple rounds of single-molecule measurements.

Authors:  Tapas Paul; Taekjip Ha; Sua Myong
Journal:  Biophys J       Date:  2021-03-04       Impact factor: 4.033

Review 10.  (Dis)Solving the problem of aberrant protein states.

Authors:  Charlotte M Fare; James Shorter
Journal:  Dis Model Mech       Date:  2021-05-04       Impact factor: 5.758

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