Literature DB >> 3161077

Involvement of helicase II (uvrD gene product) and DNA polymerase I in excision mediated by the uvrABC protein complex.

P R Caron, S R Kushner, L Grossman.   

Abstract

The bimodal-incision nature of the reaction of UV-irradiated DNA catalyzed by the Escherichia coli uvrABC protein complex potentially leads to excision of a 12- to 13-nucleotide-long damaged fragment. However, the oligonucleotide fragment containing the UV-induced pyrimidine dimer is not released under nondenaturing in vitro reaction conditions. Also, the uvrABC proteins are stably bound to the incised DNA and do not turn over after the incision event. In this communication it is shown that release of the damaged fragment from the parental uvrABC-incised DNA is dependent upon either chelating conditions or the simultaneous addition of the uvrD gene product (helicase II) and the polA gene product (DNA polymerase I) when polymerization of deoxynucleoside triphosphate substrates is concomitantly catalyzed. The product of this multiprotein-catalyzed series of reactions serves as a substrate for polynucleotide ligase, resulting in the restoration of the integrity of the strands of DNA. The addition of the uvrD protein to the incised DNA-uvrABC complex also results in turnover of the uvrC protein. It is suggested that the repair processes of incision, excision, resynthesis, and ligation are coordinately catalyzed by a complex of proteins in a "repairosome" configuration.

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Year:  1985        PMID: 3161077      PMCID: PMC390470          DOI: 10.1073/pnas.82.15.4925

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  33 in total

1.  Genetic control of multiple pathways of post-replicational repair in uvrB strains of Escherichia coli K-12.

Authors:  D A Youngs; K C Smith
Journal:  J Bacteriol       Date:  1976-01       Impact factor: 3.490

2.  DNA unwinding enzyme II of Escherichia coli. 1. Purification and characterization of the ATPase activity.

Authors:  M Abdel-Monem; M C Chanal; H Hoffmann-Berling
Journal:  Eur J Biochem       Date:  1977-09-15

3.  Nucleotide excision repair of damaged DNA.

Authors:  L Grossman; S Riazuddin; W A Haseltine; C Lindan
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1979

4.  Reconstitution of an Escherichia coli repair endonuclease activity from the separated uvrA+ and uvrB+/uvrC+ gene products.

Authors:  E Seeberg
Journal:  Proc Natl Acad Sci U S A       Date:  1978-06       Impact factor: 11.205

5.  DNA polymerase III holoenzyme of Escherichia coli. Purification and resolution into subunits.

Authors:  C McHenry; A Kornberg
Journal:  J Biol Chem       Date:  1977-09-25       Impact factor: 5.157

6.  Persistence of deoxyribonucleic acid polymerase I and its 5'--3' exonuclease activity in PolA mutants of Escherichia coli K12.

Authors:  I R Lehman; J R Chien
Journal:  J Biol Chem       Date:  1973-11-25       Impact factor: 5.157

7.  A novel repair enzyme: UVRABC excision nuclease of Escherichia coli cuts a DNA strand on both sides of the damaged region.

Authors:  A Sancar; W D Rupp
Journal:  Cell       Date:  1983-05       Impact factor: 41.582

8.  The involvement of polynucleotide ligase in the repair of UV-induced DNA damage in Escherichia coli K-12 cells.

Authors:  D A Youngs; K C Smith
Journal:  Mol Gen Genet       Date:  1977-03-28

9.  Pyrimidine dimer excision in Escherichia coli strains deficient in exonucleases V and VII and in the 5' leads to 3' exonuclease of DNA polymerase I.

Authors:  J W Chase; W E Masker; J B Murphy
Journal:  J Bacteriol       Date:  1979-01       Impact factor: 3.490

10.  DNA repair in Escherichia coli mutants deficient in DNA polymerases I, II and-or 3.

Authors:  R C Tait; A L Harris; D W Smith
Journal:  Proc Natl Acad Sci U S A       Date:  1974-03       Impact factor: 11.205

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  81 in total

1.  A region near the C-terminal end of Escherichia coli DNA helicase II is required for single-stranded DNA binding.

Authors:  L E Mechanic; M E Latta; S W Matson
Journal:  J Bacteriol       Date:  1999-04       Impact factor: 3.490

2.  Localization of UvrA and effect of DNA damage on the chromosome of Bacillus subtilis.

Authors:  Bradley T Smith; Alan D Grossman; Graham C Walker
Journal:  J Bacteriol       Date:  2002-01       Impact factor: 3.490

3.  Interactions between UvrA and UvrB: the role of UvrB's domain 2 in nucleotide excision repair.

Authors:  James J Truglio; Deborah L Croteau; Milan Skorvaga; Matthew J DellaVecchia; Karsten Theis; Bhaskar S Mandavilli; Bennett Van Houten; Caroline Kisker
Journal:  EMBO J       Date:  2004-06-10       Impact factor: 11.598

4.  Resolving Holliday junctions with Escherichia coli UvrD helicase.

Authors:  Annamarie S Carter; Kambiz Tahmaseb; Sarah A Compton; Steven W Matson
Journal:  J Biol Chem       Date:  2012-01-20       Impact factor: 5.157

5.  Modulation of UvrD helicase activity by covalent DNA-protein cross-links.

Authors:  Anuradha Kumari; Irina G Minko; Rebecca L Smith; R Stephen Lloyd; Amanda K McCullough
Journal:  J Biol Chem       Date:  2010-05-04       Impact factor: 5.157

6.  Structural insights into the first incision reaction during nucleotide excision repair.

Authors:  James J Truglio; Benjamin Rhau; Deborah L Croteau; Liqun Wang; Milan Skorvaga; Erkan Karakas; Matthew J DellaVecchia; Hong Wang; Bennett Van Houten; Caroline Kisker
Journal:  EMBO J       Date:  2005-02-03       Impact factor: 11.598

7.  Structure of the C-terminal half of UvrC reveals an RNase H endonuclease domain with an Argonaute-like catalytic triad.

Authors:  Erkan Karakas; James J Truglio; Deborah Croteau; Benjamin Rhau; Liqun Wang; Bennett Van Houten; Caroline Kisker
Journal:  EMBO J       Date:  2007-01-24       Impact factor: 11.598

Review 8.  Prokaryotic nucleotide excision repair.

Authors:  Caroline Kisker; Jochen Kuper; Bennett Van Houten
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-03-01       Impact factor: 10.005

9.  ATP-dependent partitioning of the DNA template into supercoiled domains by Escherichia coli UvrAB.

Authors:  H S Koo; L Claassen; L Grossman; L F Liu
Journal:  Proc Natl Acad Sci U S A       Date:  1991-02-15       Impact factor: 11.205

10.  Identification of a umuDC locus in Salmonella typhimurium LT2.

Authors:  C M Smith; E Eisenstadt
Journal:  J Bacteriol       Date:  1989-07       Impact factor: 3.490

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