| Literature DB >> 31581610 |
Annalisa De Girolamo1, Marina Cortese2, Salvatore Cervellieri3, Vincenzo Lippolis4, Michelangelo Pascale5, Antonio Francesco Logrieco6, Michele Suman7.
Abstract
Fourier transform near infrared (FT-NIR) spectroscopy, in combination with principal component-linear discriminant analysis (PC-LDA), was used for tracing the geographical origin of durum wheat samples. The classification model PC-LDA was applied to discriminate durum wheat samples originating from Northern, Central, and Southern Italy (n = 181), and to differentiate Italian durum wheat samples from those cultivated in other countries across the world (n = 134). Developed models were validated on a separated set of wheat samples. Different pre-treatments of spectral data and different spectral regions were selected and compared in terms of overall discrimination (OD) rates obtained in validation. The LDA models were able to correctly discriminate durum Italian wheat samples according to their geographical origin (i.e., North, Central, and South) with OD rates of up of 96.7%. Better results were obtained when LDA models were applied to the discrimination of Italian durum wheat samples from those originating from other countries across the world, having OD rates of up to 100%. The excellent results obtained herein clearly indicate the potential of FT-NIR spectroscopy to be used for the discrimination of durum wheat samples according to their geographical origin.Entities:
Keywords: FT-NIR spectroscopy; durum wheat; geographical origin; linear discriminant analysis
Year: 2019 PMID: 31581610 PMCID: PMC6835725 DOI: 10.3390/foods8100450
Source DB: PubMed Journal: Foods ISSN: 2304-8158
Classification of durum wheat samples originating from different regions of Italy.
| Classification | Region | Number of Samples |
|---|---|---|
| Northern | Emilia Romagna | 18 |
| Lombardy | 20 | |
| Veneto | 18 | |
| Total | 56 | |
| Central | Lazio | 15 |
| Marche | 16 | |
| Tuscany | 13 | |
| Umbria | 17 | |
| Total | 61 | |
| Southern | Abruzzo | 12 |
| Campania | 15 | |
| Molise | 17 | |
| Apulia | 20 | |
| Total | 64 | |
| Overall total | 181 |
Classification of durum wheat samples collected from across the world.
| Classification | Countries | Number of Samples |
|---|---|---|
| Other countries | Spain | 3 |
| Turkey | 11 | |
| Greece | 11 | |
| Russia | 8 | |
| France | 13 | |
| Australia | 9 | |
| United States | 8 | |
| Canada | 12 | |
| Total | 75 |
Figure 1Raw Fourier transform near infrared (FT-NIR) spectra of the entire set of 181 Italian wheat samples with fundamental spectral bands (a), and average FT-NIR spectra of the Northern (blue trace), Central (green trace), and Southern (red trace) wheat classes. Central and Southern traces completely overlapped (b).
Figure 2FT-NIR spectra of the entire set of Italian wheat samples pre-treated with mean normalization (a), standard normal variate (b), and detrending (c).
Classification table (validation results) of the principal component-linear discriminant analysis for wheat samples grown in different geographical areas of Italy and analyses by FT-NIR spectroscopy. Spectral data were pre-treated using mean normalization.
| Spectral Region | Assigned Class a | Predicted Class a | ||
|---|---|---|---|---|
| Northern | Central | Southern | ||
| 10,000–4000 cm−1 | Northern | 17 | 0 | 0 |
| Central | 1 | 18 | 0 | |
| Southern | 1 | 2 | 21 | |
| CC samples (%) b | 89.5 | 90.0 | 100.0 | |
| OD rate (%) c | 93.3 | |||
| 7700–4500 cm−1 | Northern | 18 | 1 | 0 |
| Central | 1 | 19 | 0 | |
| Southern | 0 | 0 | 21 | |
| CC samples (%) b | 94.7 | 95.0 | 100 | |
| OD rate (%) c | 96.7 | |||
| 6000–4500 cm−1 | Northern | 18 | 1 | 0 |
| Central | 1 | 19 | 0 | |
| Southern | 0 | 0 | 21 | |
| CC samples (%) b | 94.7 | 95.0 | 100 | |
| OD rate (%) c | 96.7 | |||
| 5500–4000 cm−1 | Northern | 17 | 1 | 0 |
| Central | 2 | 19 | 1 | |
| Southern | 0 | 0 | 20 | |
| CC samples (%) b | 89.5 | 95.0 | 95.2 | |
| OD rate (%) c | 93.3 | |||
a Northern Italy: samples from Emilia Romagna, Lombardy, Veneto; Central Italy: samples from Lazio, Marche, Toscana, Umbria; Southern Italy: samples from Abruzzo, Campania, Molise, Puglia; b CC, correctly classified; c OD, overall discrimination.
Figure 3Principal components-linear discriminant analysis (PC-LDA) score plot for wheat samples (validation results) grown in different geographical areas of Italy (North, Central, and South) analyzed by FT-NIR in the spectral region between 6000–4500 cm−1 and using the mean normalization pre-treatment of spectral data. Samples from different geographical origin are presented by different symbols.
Figure 4Average Principal component analysis (PCA) score plot for the entire set of wheat samples grown in “Italy” and in “other countries” across the world, analyzed by FT-NIR in the spectral region between 10000–4000 cm−1 and using the detrending pre-treatment of spectral data. Samples from different geographical origin are presented by different symbols (a). FT-NIR spectra of wheat classes “Italy” and “other countries” (b).
Classification table (validation results) of the principal component-linear discriminant analysis for wheat samples grown in “Italy” and in several “other countries” across the world, and analyzed by FT-NIR spectroscopy. Spectral data were pre-treated using detrending.
| Spectral Region | Assigned Class a | Predicted Class a | |
|---|---|---|---|
| Italy | Other Countries | ||
| 10,000–4000 cm−1 | Italy | 13 | 1 |
| Other countries | 2 | 14 | |
| CC samples (%) b | 86.7 | 93.3 | |
| OD rate (%) c | 90.0 | ||
| 7700–4500 cm−1 | Italy | 15 | 1 |
| Other countries | 0 | 14 | |
| CC samples (%) b | 100 | 93.3 | |
| OD rate (%) c | 96.7 | ||
| 6000–4500 cm−1 | Italy | 15 | 0 |
| Other countries | 0 | 15 | |
| CC samples (%) b | 100 | 100 | |
| OD rate (%) c | 100 | ||
| 5500–4000 cm−1 | Italy | 15 | 1 |
| Other countries | 0 | 14 | |
| CC samples (%) b | 100 | 93.3 | |
| OD rate (%) c | 96.7 | ||
a Italy: samples from different areas, i.e., Emilia Romagna, Lombardy, Veneto, Lazio, Marche, Toscana, Umbria, Abruzzo, Campania, Molise, and Puglia; other countries: samples from Spain, Turkey, Greece, Russia, France, Australia, the United States, and Canada; b CC, correctly classified; c OD, overall discrimination.
Figure 5PC-LDA score plot for wheat samples (validation results) grown in “Italy” and in “other countries” across the world, analyzed by FT-NIR in the spectral region between 6000–4500 cm−1 and using the detrending pre-treatment of spectral data. Samples from different geographical origin are presented by different symbols.