Literature DB >> 31541931

TmDOTP: An NMR-based thermometer for magic angle spinning NMR experiments.

Dongyu Zhang1, Boris Itin2, Ann E McDermott3.   

Abstract

Solid state NMR is a powerful tool to probe membrane protein structure and dynamics in native lipid membranes. Sample heating during solid state NMR experiments can be caused by magic angle spinning and radio frequency irradiation such heating produces uncertainties in the sample temperature and temperature distribution, which can in turn lead to line broadening and sample deterioration. To measure sample temperatures in real time and to quantify thermal gradients and their dependence on radio frequency irradiation or spinning frequency, we use the chemical shift thermometer TmDOTP, a lanthanide complex. The H6 TmDOTP proton NMR peak has a large chemical shift (-176.3 ppm at 275 K) and it is well resolved from the protein and lipid proton spectrum. Compared to other NMR thermometers (e.g., the proton NMR signal of water), the proton spectrum of TmDOTP, particularly the H6 proton line, exhibits very high thermal sensitivity and resolution. In MAS studies of proteoliposomes we identify two populations of TmDOTP with differing temperatures and dependency on the radio frequency irradiation power. We interpret these populations as arising from the supernatant and the pellet, which is sedimented during sample spinning. In this study, we demonstrate that TmDOTP is an excellent internal standard for monitoring real-time temperatures of biopolymers without changing their properties or obscuring their spectra. Real time temperature calibration is expected to be important for the interpretation of dynamics and other properties of biopolymers.
Copyright © 2019. Published by Elsevier Inc.

Entities:  

Keywords:  Dielectric loss; Magic-angle spinning; Nuclear magnetic resonance; Real-time NMR temperature measurement; Sample Heating; TmDOTP(5-)

Year:  2019        PMID: 31541931      PMCID: PMC7296554          DOI: 10.1016/j.jmr.2019.106574

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  27 in total

1.  High-resolution molecular structure of a peptide in an amyloid fibril determined by magic angle spinning NMR spectroscopy.

Authors:  Christopher P Jaroniec; Cait E MacPhee; Vikram S Bajaj; Michael T McMahon; Christopher M Dobson; Robert G Griffin
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-08       Impact factor: 11.205

2.  Analysis of RF heating and sample stability in aligned static solid-state NMR spectroscopy.

Authors:  Conggang Li; Yiming Mo; Jun Hu; Eduard Chekmenev; Changlin Tian; Fei Philip Gao; Riqiang Fu; Peter Gor'kov; William Brey; Timothy A Cross
Journal:  J Magn Reson       Date:  2006-02-17       Impact factor: 2.229

Review 3.  Structure and dynamics of membrane proteins by magic angle spinning solid-state NMR.

Authors:  Ann McDermott
Journal:  Annu Rev Biophys       Date:  2009       Impact factor: 12.981

4.  Gating Mechanism of Aquaporin Z in Synthetic Bilayers and Native Membranes Revealed by Solid-State NMR Spectroscopy.

Authors:  Yongxiang Zhao; Huayong Xie; Lili Wang; Yang Shen; Wei Chen; Benteng Song; Zhengfeng Zhang; Anmin Zheng; Qingsong Lin; Riqiang Fu; Jufang Wang; Jun Yang
Journal:  J Am Chem Soc       Date:  2018-06-11       Impact factor: 15.419

5.  Characterization of different water pools in solid-state NMR protein samples.

Authors:  Anja Böckmann; Carole Gardiennet; René Verel; Andreas Hunkeler; Antoine Loquet; Guido Pintacuda; Lyndon Emsley; Beat H Meier; Anne Lesage
Journal:  J Biomol NMR       Date:  2009-11       Impact factor: 2.835

6.  Sensitivity enhancement using paramagnetic relaxation in MAS solid-state NMR of perdeuterated proteins.

Authors:  Rasmus Linser; Veniamin Chevelkov; Anne Diehl; Bernd Reif
Journal:  J Magn Reson       Date:  2007-09-18       Impact factor: 2.229

7.  Pf1 bacteriophage hydration by magic angle spinning solid-state NMR.

Authors:  Ivan V Sergeyev; Salima Bahri; Loren A Day; Ann E McDermott
Journal:  J Chem Phys       Date:  2014-12-14       Impact factor: 3.488

8.  Quantifying conformational dynamics using solid-state R₁ρ experiments.

Authors:  Caitlin M Quinn; Ann E McDermott
Journal:  J Magn Reson       Date:  2012-05-29       Impact factor: 2.229

9.  Reduction of RF-induced sample heating with a scroll coil resonator structure for solid-state NMR probes.

Authors:  John A Stringer; Charles E Bronnimann; Charles G Mullen; Donghua H Zhou; Sara A Stellfox; Ying Li; Evan H Williams; Chad M Rienstra
Journal:  J Magn Reson       Date:  2005-03       Impact factor: 2.229

10.  TmDOTP5-: a substance for NMR temperature measurements in vivo.

Authors:  C S Zuo; J L Bowers; K R Metz; T Nosaka; A D Sherry; M E Clouse
Journal:  Magn Reson Med       Date:  1996-12       Impact factor: 4.668

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  3 in total

Review 1.  1H-Detected Biomolecular NMR under Fast Magic-Angle Spinning.

Authors:  Tanguy Le Marchand; Tobias Schubeis; Marta Bonaccorsi; Piotr Paluch; Daniela Lalli; Andrew J Pell; Loren B Andreas; Kristaps Jaudzems; Jan Stanek; Guido Pintacuda
Journal:  Chem Rev       Date:  2022-05-10       Impact factor: 72.087

Review 2.  Recent developments in deuterium solid-state NMR for the detection of slow motions in proteins.

Authors:  Liliya Vugmeyster
Journal:  Solid State Nucl Magn Reson       Date:  2021-01-07       Impact factor: 2.293

3.  Informing NMR experiments with molecular dynamics simulations to characterize the dominant activated state of the KcsA ion channel.

Authors:  Sergio Pérez-Conesa; Eric G Keeler; Dongyu Zhang; Lucie Delemotte; Ann E McDermott
Journal:  J Chem Phys       Date:  2021-04-28       Impact factor: 4.304

  3 in total

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