Literature DB >> 31497638

Robust automated computational approach for classifying frontotemporal neurodegeneration: Multimodal/multicenter neuroimaging.

Patricio Andres Donnelly-Kehoe1,2, Guido Orlando Pascariello1,2, Adolfo M García3,4,5, John R Hodges6,7, Bruce Miller8, Howie Rosen9, Facundo Manes3,4,6, Ramon Landin-Romero6,10, Diana Matallana11, Cecilia Serrano12,13, Eduar Herrera14, Pablo Reyes15,16, Hernando Santamaria-Garcia15,16, Fiona Kumfor6,10, Olivier Piguet6,10, Agustin Ibanez3,4,6,17,18, Lucas Sedeño3,4.   

Abstract

INTRODUCTION: Timely diagnosis of behavioral variant frontotemporal dementia (bvFTD) remains challenging because it depends on clinical expertise and potentially ambiguous diagnostic guidelines. Recent recommendations highlight the role of multimodal neuroimaging and machine learning methods as complementary tools to address this problem.
METHODS: We developed an automatic, cross-center, multimodal computational approach for robust classification of patients with bvFTD and healthy controls. We analyzed structural magnetic resonance imaging and resting-state functional connectivity from 44 patients with bvFTD and 60 healthy controls (across three imaging centers with different acquisition protocols) using a fully automated processing pipeline, including site normalization, native space feature extraction, and a random forest classifier.
RESULTS: Our method successfully combined multimodal imaging information with high accuracy (91%), sensitivity (83.7%), and specificity (96.6%). DISCUSSION: This multimodal approach enhanced the system's performance and provided a clinically informative method for neuroimaging analysis. This underscores the relevance of combining multimodal imaging and machine learning as a gold standard for dementia diagnosis.

Entities:  

Keywords:  Classifiers; Data-driven computational approaches; Dementia; Neuroimaging; bvFTD

Year:  2019        PMID: 31497638      PMCID: PMC6719282          DOI: 10.1016/j.dadm.2019.06.002

Source DB:  PubMed          Journal:  Alzheimers Dement (Amst)        ISSN: 2352-8729


Background

Clinical neuroscience has failed to fully profit from the richness of neuroimaging data, and computational approaches represent the next frontier for developing more robust methods [1], [2], in particular for neurodegenerative diseases [3]. Early diagnosis of these conditions remains challenging because it depends on clinical expertise to follow and interpret diagnostic guidelines [4], in a context of vast sociogeographical variability [5]. This is especially true for behavioral variant frontotemporal dementia (bvFTD) —the second most common dementia before age 65— which presents a relatively young onset, clinical overlap with other diseases, and variability in brain atrophy patterns [6]. Automatized multimodal neuroimaging analysis (mainly based on volumetric magnetic resonance imaging [MRI] and positron emission tomography measures), combined with computational decision-support methods, have been proposed as a potentially useful approach for early diagnosis [1], [2]. However, few studies have evaluated the robustness of resting-state functional connectivity (FC) for discriminating patients with bvFTD from healthy controls (HCs) with automated methods, even though neurodegeneration is a complex process impacting brain structure, function, and network connectivity [7], [8]. Moreover, previous studies have shown that disease-related network alterations precede brain atrophy [8], [9]. Yet, the potential benefit of combining FC and atrophy measures in computational learning approaches remains untested in bvFTD. Data-driven approaches with feature-selection techniques are mostly neglected in the field, although they may successfully classify complex clinical conditions [2] because of their generalization power and reduction of overfitting. Here, we introduce a novel approach combining multimodal information associated with neurodegeneration (atrophy and FC), performing joint inferences over different centers (multicenter normalization process), and using robust machine learning methods to classify patients from HCs. Different noninvasive neuroimaging modalities have been used to discriminate between patients with bvFTD and HCs. However, evidence for improved classification has been mixed when analyses rely on combined neuroimaging techniques (e.g., MRI and diffusion images) [10]. Moreover, despite yielding good accuracy rates, most studies presented several limitations including a relatively small sample size [11], the inclusion of heterogeneous FTD variants with different anatomo-clinical profiles [10], [11], [12], [13], the absence of HCs [14], the lack of cross-center comparisons [10], [11], [12], [13], the use of nonautomatic procedures [15], and the absence of data-driven computational approaches. More importantly, none of these reports have included FC data despite its proposed role as a biomarker for bvFTD diagnosis [7], [8], [9]. The only study using classification methods on FC data obtained high discrimination between HCs and patients with bvFTD [15]. Yet, its sample size was small (12 participants per group), it included unimodal information only, and resting-state images were acquired from two different scans without normalization procedures. In sum, robust data-driven computational approaches combining atrophy and FC measures to differentiate between patients with bvFTD and HCs remain promising but unexplored. To bridge this gap, our main objective is to use a fully automated computational framework (Fig. 1A) to extract the most relevant multimodal MRI-based features (atrophy and FC) to identify patients with bvFTD across three countries. We expect that our multimodal approach will outperform classification results considering only one neuroimaging modality (atrophy or FC). Contrary to cognitive screening methods or other model-driven strategies, our approach is blind to any “a priori human” assumption. This study presents a feasible complementary tool for clinical diagnosis [1], [2] representing a crucial initial step to consolidate multimodal and data-driven computational approaches as a gold standard method for dementia.
Fig. 1

Preprocessing, data analysis, and site normalization. (A) Main overview of the processing framework used for the multimodal integration of structural and functional information using machine learning techniques. p(bvFTD) refers to the probability of being classified as a behavioral variant frontotemporal dementia (bvFTD) patient, SVM refers to support vector machine classifier, ROC to receiver operating characteristic, RS to resting state, BOLD to blood oxygen level dependent, sMRI to structural MRI, and rsfMRI to resting-state functional MRI. (B) Confusion matrix before and after the site normalization process for both structural data (left) and functional data (right).

Preprocessing, data analysis, and site normalization. (A) Main overview of the processing framework used for the multimodal integration of structural and functional information using machine learning techniques. p(bvFTD) refers to the probability of being classified as a behavioral variant frontotemporal dementia (bvFTD) patient, SVM refers to support vector machine classifier, ROC to receiver operating characteristic, RS to resting state, BOLD to blood oxygen level dependent, sMRI to structural MRI, and rsfMRI to resting-state functional MRI. (B) Confusion matrix before and after the site normalization process for both structural data (left) and functional data (right).

Materials and methods

Participants

The study comprised 104 participants from a current multicenter protocol [16], [17], [18]. Sixty were HCs with no history of psychiatric or neurological disease, and 44 were patients fulfilling revised consensus criteria for probable bvFTD [19] from three international clinics: INECO Foundation, Argentina (country-1); San Ignacio University Hospital-Javeriana University, Colombia (country-2); and the Frontotemporal Dementia Research Group (FRONTIER), Sydney, Australia (country-3). Both groups were matched on sex, age, and education (Table 1). The patients' clinical diagnosis was established in each center through a standard examination including extensive neurological, neuropsychiatric, and neuropsychological assessments. Each case was revised by a multidisciplinary clinical meeting of bvFTD experts, as previously reported [16], [18], [20]. All patients were in early/mild disease stages. They did not fulfill criteria for specific psychiatric disorders, and they did not exhibit primary language deficits. Functional impairment and prominent changes in personality and social behavior were confirmed by caregivers for all cases. MRI revealed frontal atrophy in each patient, and those with single-photon emission computed tomography data exhibited frontal hypoperfusion (for further clinical and demographic details, see [18]).
Table 1

Demographic information

ControlsbvFTDStatisticsP values
SexF = 33M = 27F = 25M = 190.06.79
Age63.91 (7.63)66.72 (8.33)3.10.08
Education14.83 (4.27)13.75 (4.06)1.62.20

Abbreviation: bvFTD, behavioral variant of frontotemporal dementia.

Chi-square test.

ANOVA test. Mean (standard deviation).

Demographic information Abbreviation: bvFTD, behavioral variant of frontotemporal dementia. Chi-square test. ANOVA test. Mean (standard deviation). The institutional ethics committee of each center approved the study protocol. All participants (or their person responsible) provided signed informed consent in accordance with the Declaration of Helsinki.

Image acquisition

We followed a multicenter strategy [18] including structural and resting-state sequences from different MRI machine manufacturers, permanent magnetic fields, and varying acquisition parameters. This allowed us to test the reliability of our novel methods against the variability of MRI devices and protocols. MRI acquisition and preprocessing steps are reported following guidelines from the Organization for Human Brain Mapping [21] (for acquisition details, see Supplementary Material 1-2, and Table 2).
Table 2

fMRI acquisition parameters and scanning protocol in each center

Country-1Country-2Country-3
A. Acquisition parameters
 FirmPhilips InteraPhilips AchievaPhilips Achieva
 Tesla1.5 T3 T3 T
 Number of slices334029
 Voxel size3.6 x 3.6 × 4 mm3 x 3 × 3 mm1.88 x 1.88 × 4.5 mm
 Flip angle90
 AcquisitionAscending. Parallel to the anterior and posterior commissures.
 Repetition time2777 ms3000 ms2000 ms
 Echo time50 ms30 ms30 ms
 Duration10 min5 min7 min
 Instruction“Do not think about anything in particular”
 Number of volumes209120208

Behavioral variant frontotemporal dementia (bvFTD).

Mann-Whitney U statistic.

fMRI acquisition parameters and scanning protocol in each center Behavioral variant frontotemporal dementia (bvFTD). Mann-Whitney U statistic.

Structural imaging preprocessing and analysis

Preprocessing for classification

All T1 brain volumes were processed to obtain a complete morphometric description, based on a surface-based morphometry analysis [22] using FreeSurfer (v 6.0) image analysis suite (see preprocessing details in Supplementary Material 3).

Site normalization for structural images

We performed a site normalization to avoid MRI-setup–dependent bias in the measurements. For this, we replicated a previous procedure [23], replacing w-scores by z-scores because of the narrow age range in our sample. To estimate the z-scores, we first removed nonuseful and nonphysiological features (including non–white matter hypointensities, white matter hypointensities, and several curvatures) presenting a nonnormal distribution after Shapiro-Wilk tests –no volumes or thickness measures were removed during this step. Then, for each center, each feature (volume and thickness) of both HCs and patients was z-scored based on the mean and standard deviation of the corresponding center's HCs. To corroborate the effectiveness of procedure, we applied a Random Forest Classifier (RFC) with leave-one-out cross-validation (LOOCV) to identify each HC's center of origin. As in [23], results (Fig. 1B) showed high discrimination accuracy before site normalization and full confusion afterward (i.e., chance accuracy).

Functional imaging preprocessing

Image preprocessing

Data preprocessing was performed using a pipeline written in Python 2.7, following previous studies [24], [25], [26] (see preprocessing details in Supplementary Material 4).

Matrix construction

We performed a registration from the high-resolution anatomical space (T1 3D) to the low-resolution mean functional MRI (fMRI) image space using FSL FLIRT [24] with 6 degrees of freedom and mutual information score as cost function. Then, we used the parcels' masks from the native space obtained via Desikan-Killiany parcellation [27] in the structural processing to obtain mean time signals from 83 brain cortical and subcortical regions (by using FSL's fslmeants). Each resting-state fMRI recording was represented by 83 nodes with different timepoints depending on the acquisition center (Table 2). In addition, using a sixth-order Butterworth band-pass filter [28], we estimated narrow-band time signals, filtered in a frequency band that has been mapped to gray matter activity (0.04-0.07 Hz) [26]. Fisher's correlation coefficient was used to construct an 83-node functional connectivity network for each subject. We integrated a quality assurance procedure in the pipeline to rapidly compare and explore time signals and correlation matrices before and after the narrow-band filtering to avoid unexpected artifacts (such as over peaks in the extremes of the signals, passband ripples, and unexpected phase effects). Features for the functional analysis (n = 3403) were extracted from the upper-right triangle of the connectivity matrix.

Site normalization for FC matrices

We performed the same site normalization procedure and analysis used on anatomical data. Higher classification of the HCs' center of origin was obtained with nonnormalized data than with normalized data (Fig. 1B). No features were removed given that all of them exhibited a normal distribution at each center.

Feature reduction of FC for machine learning

Owing to the large number of features and the need to circumvent overfitting problems [29], we implemented a feature-reduction strategy that was integrated into all subsequent machine learning analyses with fMRI-based connections. At each iteration of the LOOCV scheme [30] (described at section 2.5.1), we followed a previously reported strategy [31]. However, to decrease computational costs, we replaced the linear regression [31] by the computation of the Pearson's correlation coefficient [32] between each feature and the binary class vector (the group of tags we wanted to predict). Then, we generated a histogram with all correlation coefficients, removed the two thirds with the lowest absolute values, and retained the most informative features to be processed in subsequent stages. This threshold was fixed ad-hoc to retain a number of features (≈1000) that could be handled by the proposed classifier according to the training sample size (≈100).

Machine learning methods

Fig. 1A shows the overall analysis pipeline used to integrate machine learning techniques with a multimodal and native space-based strategy.

Single MRI modality approach

Feature-selection procedure

Preprocessed features of each neuroimaging modality were analyzed via a progressive feature elimination procedure [33] with a LOOCV scheme. We optimized the accuracy of an RFC by varying the number of features from all to a single one according to its classificatory relevance. RFC quantifies the importance of a feature depending on how much the average Gini impurity index decreases in the forest because of its use as node in a tree. We used this score to progressively eliminate features by removing the feature with the lowest importance at each iteration. Finally, we kept the N first features in the ranking, where N is the optimal number of features such that using more than N features fail to improve the classifier's performance. These analyses were performed with the RFC implemented in the Python's scikit-learn package, with a fixed number of trees (2000) and the recommended number of features (P) in each split, where P is the square root of the number of features. The optimal number of features for each modality was selected visually by using the minimal quantity at which accuracy became constant. We used this fixed number of features to obtain the accuracy, the confusion matrix, and the receiver operating characteristic (ROC) curve, and to obtain each subject's intramodality probability of being in the disease group.

Multimodal analysis

We used each subject's intramodality probabilities (structural bvFTD probability and functional bvFTD probability) to generate a two-dimensional multimodal space. Then, we used a linear support vector machine (SVM) classifier [34] to obtain the multimodal decision boundaries for the classification among populations. We used a LOOCV scheme to characterize the confusion matrix, ROC curves, and each subject's probability of being classified as bvFTD (p[bvFTD]) using this multimodal integration strategy. To select the optimal point of multimodal classification, we used the information provided by ROC curves and calculated the optimal working point, maximizing Youden's J statistic. In addition, we used 30 iterations on a bootstrap scheme with a proportion of 80%/20% (train/test) to study space regions where the decision became unstable.

Generalization across sites

We implemented a cross-center validation approach to test the generalization power of our multimodal classifier. One part of the data was used for training the predictive model, and the remaining data were kept only for validation. Two centers (country-1+country-2) were used for the predictive model because they include the largest number of participants (45 HCs and 33 bvFTD), whereas country-3 was used for testing (15 HCs and 11 bvFTD).

Results

Machine learning analysis using morphometric features

Structural MRI data yielded an optimal number of 29 features, with an accuracy of 90.3% and an area under the ROC curve (AUC) of 0.78 (Fig. 2B). The confusion matrix showed an almost balanced profile between false positives and false negatives, with a sensitivity of 86% and a specificity of 93.3%.
Fig. 2

Atrophy pattern and classification analysis based on morphometric features. (A) Damage extension in patients with behavioral variant of frontotemporal dementia (bvFTD) compared with the healthy controls (HCs) for each center via voxel-based morphometry (VBM) analysis (see Supplementary Material 1 for details of this analysis). (B) Overview of the selection of the optimal number of features, the confusion matrix, and the main descriptors of the classifier. LOOCV refers to leave-one-out cross validation, ROC to receiver operational characteristic curve, and AUC to area under the ROC curve. (C) On the left side, we list the main features in order of importance for the classification analysis; on the right side, we show the anatomical distribution of the features with a color code ranking their relevance: red-to-white features are those with the highest contribution (red) for the classification rate, while white-to-blue ones were dismissed after the selection of the optimal number of features. Numbers point to brain structures listed on the left.

Atrophy pattern and classification analysis based on morphometric features. (A) Damage extension in patients with behavioral variant of frontotemporal dementia (bvFTD) compared with the healthy controls (HCs) for each center via voxel-based morphometry (VBM) analysis (see Supplementary Material 1 for details of this analysis). (B) Overview of the selection of the optimal number of features, the confusion matrix, and the main descriptors of the classifier. LOOCV refers to leave-one-out cross validation, ROC to receiver operational characteristic curve, and AUC to area under the ROC curve. (C) On the left side, we list the main features in order of importance for the classification analysis; on the right side, we show the anatomical distribution of the features with a color code ranking their relevance: red-to-white features are those with the highest contribution (red) for the classification rate, while white-to-blue ones were dismissed after the selection of the optimal number of features. Numbers point to brain structures listed on the left. Fig. 2C shows the most relevant features from the LOOCV analysis. As the importance in RFC is a decimal value with a range of several orders of magnitude, we used decibels to compress the full scale of importance in a logarithmic way. In this, we used the last element of the optimal features group —in this case, feature 29— as reference. The most important features were mainly temporal (amygdala; hippocampus; inferior, middle, and superior temporal gyri; temporal pole) and frontal (middle and superior frontal gyri, anterior cingulate cortex) regions [6], [35].

Machine learning analysis using functional connectivity

We found an optimal number of 14 features with an accuracy of 83.5% and an AUC of 0.89 (Fig. 3A). The confusion matrix showed an unbalanced profile between false positives and false negatives, with a tendency to yield more false negatives than false positives. The classifier performed worse than the previous one, with a sensitivity of 74.4% and a specificity of 90%.
Fig. 3

Classification analysis based on functional connectivity features. (A) Overview of the selection of the optimal number of features, the confusion matrix, and the main descriptors of the classifier. LOOCV refers to leave-one-out cross-validation, ROC to receiver operational characteristic curve and AUC to area under the ROC curve. (B) On the left side, we list the main features in order of importance for the classification analysis; on the right side, we show the anatomical distribution of the features with a color code to ranking their relevance: red-to-white features are those with the highest contribution (red) for the classification rate, while white-to-blue ones were dismissed after the selection of the optimal number of features. Numbers point to brain structures listed on the left, and the same number points to both linked brain structures.

Classification analysis based on functional connectivity features. (A) Overview of the selection of the optimal number of features, the confusion matrix, and the main descriptors of the classifier. LOOCV refers to leave-one-out cross-validation, ROC to receiver operational characteristic curve and AUC to area under the ROC curve. (B) On the left side, we list the main features in order of importance for the classification analysis; on the right side, we show the anatomical distribution of the features with a color code to ranking their relevance: red-to-white features are those with the highest contribution (red) for the classification rate, while white-to-blue ones were dismissed after the selection of the optimal number of features. Numbers point to brain structures listed on the left, and the same number points to both linked brain structures. The most important features (Fig. 3B) mainly include connections between frontofrontal (connections 3, 8, 9, and 14), frontotemporal (connections 1 and 5), and frontoparietal (connections 2, 4, 6, and 10) regions.

Multimodal integration

Multimodal analysis provided a robust classification (Fig. 4). We found an optimal probability value of 0.65, yielding an accuracy of 91% and an AUC of 0.95 (Fig. 4B). We also found clear boundaries between HCs and patients with bvFTD (Fig. 4A). As shown in Fig. 4C, the multimodal integration reduced false positives to two and yielded seven false negatives, with a sensitivity of 83.7% and a specificity of 96.6%.
Fig. 4

Classification analysis based on integrated multimodal results. (A) Leave-one-out cross-validation: On the left side is the classification boundary between behavioral variant of frontotemporal dementia (bvFTD) and healthy control (HC) in the multimodal plane, with the structural bvFTD probability in the x-axis and the functional bvFTD probability in the y-axis. Points show the location for each participant in the multimodal plane while the colors represent the multimodal bvFTD probability based on a support vector machine (SVM) classifier over the 30 bootstrapping iterations. (B) The upper part of the right side shows the receiver operating characteristic (ROC) curve where the black dot indicates the optimal working point according to Youden's Index. The area under the ROC curve (AUC) and the accuracy for the optimal working point are written in the legend. (C) In the lower part of the right side is the confusion matrix for the optimal probability threshold according to Youden's Index. (D) Cross-center validation: on the left side is the ROC curve with the AUC written in the legend. On the right side is the confusion matrix obtained using an SVM.

Classification analysis based on integrated multimodal results. (A) Leave-one-out cross-validation: On the left side is the classification boundary between behavioral variant of frontotemporal dementia (bvFTD) and healthy control (HC) in the multimodal plane, with the structural bvFTD probability in the x-axis and the functional bvFTD probability in the y-axis. Points show the location for each participant in the multimodal plane while the colors represent the multimodal bvFTD probability based on a support vector machine (SVM) classifier over the 30 bootstrapping iterations. (B) The upper part of the right side shows the receiver operating characteristic (ROC) curve where the black dot indicates the optimal working point according to Youden's Index. The area under the ROC curve (AUC) and the accuracy for the optimal working point are written in the legend. (C) In the lower part of the right side is the confusion matrix for the optimal probability threshold according to Youden's Index. (D) Cross-center validation: on the left side is the ROC curve with the AUC written in the legend. On the right side is the confusion matrix obtained using an SVM. In the cross-center validation approach, we obtained an accuracy of 92.3%, an AUC of 0.97, with a sensitivity of 100% and a specificity of 86.6%.

Discussion

This work introduced and validated a robust computational approach for automatic classification of patients with bvFTD despite multiple sources of variability across different clinical centers. A computational data-driven method combining structural connectivity and FC provided the best classification, supporting the multimodal nature of neurodegeneration [8], [36]. These results highlight the potential of automatic feature extraction from MRI combined with decision-support methods to assess specific multidimensional patterns of disease. To our knowledge, this is the best structural MRI-based classification (90%) to date (Fig. 2C), showing that data-driven features resemble the early patterns of neurodegeneration in bvFTD [6], [35]. The main features corresponded to the temporal and frontal cortices. Although the amygdala, the hippocampus, and the temporal cortex showed the highest levels of discrimination, the highest accuracy levels were accomplished when frontal regions (left rostral middle frontal gyrus, right pars opercularis, superior frontal gyrus) were added to the classification because of the multivariate nature of the RFC. In previous multicenter studies, the best accuracy using only structural MRI reached 85% [35]. Main improvements compared with previous reports include (1) the use of native space to measure structural features [37] to remove errors/artifacts due to misregistration to an standard space [22], [38], (2) the inclusion and validation of a cross-center normalization to allow the unbiased mixing of data from different protocols and centers, (3) a data-driven feature-selection process to find the optimum dimensionality for each feature space and enhance generalization; and (4) a classification performed by a nonlinear model (RFC). These characteristics make the proposed method especially robust for different MRI machines and protocols, enhancing its applicability in large multicenter studies. FC results alone provided a sufficiently robust method to classify patients with bvFTD across multiple sources of variability (different MRI scanners, different recording centers, and inclusion subject's native space). Frontotemporal networks, the hallmark of impaired connectivity in bvFTD [15], [18], constituted the main features (Fig. 3B) elicited by our data-driven approach. The underperformance of this classifier's sensitivity compared with the structural MRI-based classifier may be explained by both the between-subject variability in the intrinsic FC profile [39] and the heterogeneous functional changes related to neurodegenerative diseases, which might vary over time depending on the deterioration stage at molecular and systemic levels [8]. Although a previous study has provided a higher classification rate in a multicenter setting [15], these results were limited by a very small sample size (12 HCs and 12 bvFTD patients), the nonnormalization of 2 MRI scan recordings, and the use of user-dependent methods (extraction of specific resting-state networks via independent component analysis). Here, we obtained an accuracy of 83.5% by using larger sample sizes, multicenter normalization of the signals, and a fully data-driven approach. Thus, our approach is more suitable for developing a nonhuman dependent and robust biomarker of neurodegeneration [1], [2], [18]. In addition, our methodology allowed for automatization of processing and also accounted for differences across centers. Additionally, we obtained the mean blood oxygen level dependent signal from region of interests in each subject's native space, avoiding artifacts produced by registration to a standard space [38]. Our fMRI processing method thus enhances the single-subject usability of brain network features across clinical centers. By combining structural and functional probabilities to generate multimodal space, we obtained improved classification performance whose generalization power was validated by a cross-center approach. Although the multimodal improvement in accuracy (91%) was small, relative to structural data alone, the multimodal space allowed a more thoughtful analysis from a clinical viewpoint. For example, Fig. 4A shows one false positive in the green area with high structural bvFTD probability (≈83%) and low functional bvFTD probability (≈47%); this HC is 80 year old and, as most subjects are younger, the structural classifier's performance is affected by the changes related to normal aging [40], nevertheless the functional probability suggest a healthy pattern for this subject. In addition, Fig. 4A shows five false negatives in which the functional bvFTD probability is above 0.5 and that are misclassified because of a low structural bvFTD probability, suggesting that the functional metrics could add information not contained in the atrophy pattern [8], [9]. These cases reflect the richness of a multimodal analysis, which could inform clinicians about different states of health and disease in a way that can be integrated with the patient's clinical history for diagnostic purposes. Neurodegeneration involves multiple dimensions of tissue changes. Local atrophy and apoptosis coexist or can be anticipated by synaptic connectivity abnormalities (e.g., autophagy, mitochondria, insulin/IGF-1, signaling, microRNAs) [41]. FC changes can be present before structural changes [8], [9], which in turn seem closely related with changes in FC [41]. Neurodegeneration in bvFTD is generated by pathophysiological events [42] (e.g., axonal degeneration, synapse loss, dendritic retraction) and propagation of misfolded proteins [42], [43], which impact on brain structure and connectivity. In turn, these changes induce neurotoxicity, which may activate compensatory mechanisms and/or disrupt other regions' structure and balance of damaged networks [7], [14]. Thus, a data-driven computational approach combining both structural and connectivity features affords a more biologically plausible model than unimodal approaches [36]. Data-driven methods allowed us to introduce brain information from MRI (e.g., both structural and FC information) without considering any specific anatomic pattern of alterations, which resulted in a classification not biased by any a priori data selection. However, atrophy of frontotemporal regions and changes in frontotemporal connectivity emerged as a critical feature in our classification results. These findings indicate that (1) frontotemporal patterns of atrophy and connectivity alterations can provide probability metrics for the clinical assessment of bvFTD and (2) these metrics are robust enough to overcome the potential noise and variability introduced by the differences in recording site, in the diagnosis criteria made by different centers and in sociodemographic profiles. The diagnosis of bvFTD is a complex process requiring consensus groups and multiple medical protocols/studies (visual inspection of MRI, patient's neuropsychological evaluation, relative's perspective). Therefore, the development of high sensitivity/specificity biomarkers has a major impact on clinical practice. Currently, clinical neuroimaging interpretation is reliant on visual inspection by an expert, whereas several studies (including this one) have shown that automatic analysis and use of functional networks can improve the utility of neuroimaging data by providing reliable and objective multimodal scores [1], [2]. In this context, automated, nonhuman dependent data-driven method can help seek consensus independent from a certain criterion or a specific theoretical framework. This work shows that multimodal MRI analysis can be used in a fully automated way to assess for bvFTD with a similar accuracy to that reported in multimodal positron emission tomography studies [44], but with a simpler, noninvasive procedure.

Limitations and future directions

The results presented here have limitations to be covered in future works. First, sample patients were identified based on clinical diagnosis, as biological biomarkers/pathological/genetic confirmation was not available. Nevertheless, the research centers in this study are specialized in the diagnosis, assessment, and treatment of dementia, and followed validated protocols and diagnostic guidelines [19]. In fact, all previous studies in which neuroimaging and machine learning tools were combined to study patients with bvFTD present the same limitation [10], [11], [12], [13], [14], [15]. However, future research should include biological biomarkers of bvFTD to further evaluate our neuroimaging classification method. Second, although the bvFTD sample size is larger than previous related works [10], [11], [15], [17], [45], [46] and that we used a cross-center validation approach (Fig. 4D), future studies should include even larger groups. In addition, other neurodegenerative conditions should be included in further analyses to test the power of the classifier regarding differential diagnosis. Additionally, further studies are needed to check for relationships between the probability metrics in the multimodal space and each patient's functional severity. The present approach could also be used in presymptomatic patients to look for markers in early stages of bvFTD. In addition, longitudinal assessments of the proposed metrics over time should be studied to evaluate their utility in follow-up studies of individual patients.

Conclusions

This work presented a fully automated, cross-site, multimodal, highly sensitive, and specific computational framework to assess bvFTD based on brain imaging data. Our approach provided a robust classification and assisted in the generation of a multimodal space in which each case can be assessed individually to obtain clinical insights via multimodal brain metrics. The method was validated over 103 subjects (60 HCs and 43 patients) from three different centers with high accuracy in the prediction of the state of health and disease, representing a major advance in the consolidation of multimodal image quantification and decision-support methods for clinical diagnosis. Thus, our study provides crucial support to the inclusion of data-driven methods and FC-based metrics as a gold standard in clinical neuroscience. Systematic review: Based on a review of high-quality, web of science (WoS)-indexed works, we assessed the advantages, limitations, and empirical inconsistencies of automated computational methods implemented to discriminate patients with behavioral variant frontotemporal dementia (bvFTD) from healthy controls using neuroimaging features such as atrophy and functional connectivity (FC) measures. Interpretation: To our knowledge, this is the first study presenting an automatic, cross-center, computational approach which combines atrophy and FC measures for classifying patients with bvFTD and controls. Our method, validated over 103 subjects (60 controls and 43 patients) across three different countries, yielded high classification accuracy (>90). This level of performance underscores the potential of analyzing multimodal information through machine learning approaches for dementia diagnosis. Future directions: To assess the potential clinical applications of our automatic computational approach, it is essential to study genetic forms of bvFTD during presymptomatic stages, include other neurodegenerative conditions, and perform follow-up studies of individual patients.
  41 in total

Review 1.  A review of feature selection techniques in bioinformatics.

Authors:  Yvan Saeys; Iñaki Inza; Pedro Larrañaga
Journal:  Bioinformatics       Date:  2007-08-24       Impact factor: 6.937

Review 2.  Ageing, neuronal connectivity and brain disorders: an unsolved ripple effect.

Authors:  Daniele Bano; Massimiliano Agostini; Gerry Melino; Pierluigi Nicotera
Journal:  Mol Neurobiol       Date:  2011-01-15       Impact factor: 5.590

Review 3.  Eating disturbance in behavioural-variant frontotemporal dementia.

Authors:  Olivier Piguet
Journal:  J Mol Neurosci       Date:  2011-05-17       Impact factor: 3.444

4.  Structural and functional brain connectivity in presymptomatic familial frontotemporal dementia.

Authors:  Elise G P Dopper; Serge A R B Rombouts; Lize C Jiskoot; Tom den Heijer; J Roos A de Graaf; Inge de Koning; Anke R Hammerschlag; Harro Seelaar; William W Seeley; Ilya M Veer; Mark A van Buchem; Patrizia Rizzu; John C van Swieten
Journal:  Neurology       Date:  2013-02-06       Impact factor: 9.910

5.  On the Stability of BOLD fMRI Correlations.

Authors:  Timothy O Laumann; Abraham Z Snyder; Anish Mitra; Evan M Gordon; Caterina Gratton; Babatunde Adeyemo; Adrian W Gilmore; Steven M Nelson; Jeff J Berg; Deanna J Greene; John E McCarthy; Enzo Tagliazucchi; Helmut Laufs; Bradley L Schlaggar; Nico U F Dosenbach; Steven E Petersen
Journal:  Cereb Cortex       Date:  2017-10-01       Impact factor: 5.357

6.  Looking for Alzheimer's Disease morphometric signatures using machine learning techniques.

Authors:  Patricio Andres Donnelly-Kehoe; Guido Orlando Pascariello; Juan Carlos Gómez
Journal:  J Neurosci Methods       Date:  2017-11-22       Impact factor: 2.390

Review 7.  Computational approaches to fMRI analysis.

Authors:  Jonathan D Cohen; Nathaniel Daw; Barbara Engelhardt; Uri Hasson; Kai Li; Yael Niv; Kenneth A Norman; Jonathan Pillow; Peter J Ramadge; Nicholas B Turk-Browne; Theodore L Willke
Journal:  Nat Neurosci       Date:  2017-02-23       Impact factor: 24.884

Review 8.  Best practices in data analysis and sharing in neuroimaging using MRI.

Authors:  Thomas E Nichols; Samir Das; Simon B Eickhoff; Alan C Evans; Tristan Glatard; Michael Hanke; Nikolaus Kriegeskorte; Michael P Milham; Russell A Poldrack; Jean-Baptiste Poline; Erika Proal; Bertrand Thirion; David C Van Essen; Tonya White; B T Thomas Yeo
Journal:  Nat Neurosci       Date:  2017-02-23       Impact factor: 24.884

9.  Combined evaluation of FDG-PET and MRI improves detection and differentiation of dementia.

Authors:  Juergen Dukart; Karsten Mueller; Annette Horstmann; Henryk Barthel; Harald E Möller; Arno Villringer; Osama Sabri; Matthias L Schroeter
Journal:  PLoS One       Date:  2011-03-23       Impact factor: 3.240

10.  MRI markers for mild cognitive impairment: comparisons between white matter integrity and gray matter volume measurements.

Authors:  Yu Zhang; Norbert Schuff; Monica Camacho; Linda L Chao; Thomas P Fletcher; Kristine Yaffe; Susan C Woolley; Catherine Madison; Howard J Rosen; Bruce L Miller; Michael W Weiner
Journal:  PLoS One       Date:  2013-06-06       Impact factor: 3.240

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  11 in total

1.  A multidimensional and multi-feature framework for cardiac interoception.

Authors:  Sol Fittipaldi; Sofía Abrevaya; Alethia de la Fuente; Guido Orlando Pascariello; Eugenia Hesse; Agustina Birba; Paula Salamone; Malin Hildebrandt; Sofía Alarco Martí; Ricardo Marcos Pautassi; David Huepe; Miquel Martorell Martorell; Adrián Yoris; María Roca; Adolfo M García; Lucas Sedeño; Agustín Ibáñez
Journal:  Neuroimage       Date:  2020-02-23       Impact factor: 6.556

2.  Multimodal Neurocognitive Markers of Naturalistic Discourse Typify Diverse Neurodegenerative Diseases.

Authors:  Agustina Birba; Sol Fittipaldi; Judith C Cediel Escobar; Cecilia Gonzalez Campo; Agustina Legaz; Agostina Galiani; Mariano N Díaz Rivera; Miquel Martorell Caro; Florencia Alifano; Stefanie D Piña-Escudero; Juan Felipe Cardona; Alejandra Neely; Gonzalo Forno; Mariela Carpinella; Andrea Slachevsky; Cecilia Serrano; Lucas Sedeño; Agustín Ibáñez; Adolfo M García
Journal:  Cereb Cortex       Date:  2022-08-03       Impact factor: 4.861

3.  Metacognition of emotion recognition across neurodegenerative diseases.

Authors:  Indira Garcia-Cordero; Joaquín Migeot; Sol Fittipaldi; Alexia Aquino; Cecilia Gonzalez Campo; Adolfo García; Agustín Ibáñez
Journal:  Cortex       Date:  2021-01-28       Impact factor: 4.027

Review 4.  Neuroimaging in Frontotemporal Lobar Degeneration: Research and Clinical Utility.

Authors:  Sheena I Dev; Bradford C Dickerson; Alexandra Touroutoglou
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

5.  Interoception Primes Emotional Processing: Multimodal Evidence from Neurodegeneration.

Authors:  Paula C Salamone; Agustina Legaz; Lucas Sedeño; Sebastián Moguilner; Matías Fraile-Vazquez; Cecilia Gonzalez Campo; Sol Fittipaldi; Adrián Yoris; Magdalena Miranda; Agustina Birba; Agostina Galiani; Sofía Abrevaya; Alejandra Neely; Miguel Martorell Caro; Florencia Alifano; Roque Villagra; Florencia Anunziata; Maira Okada de Oliveira; Ricardo M Pautassi; Andrea Slachevsky; Cecilia Serrano; Adolfo M García; Agustín Ibañez
Journal:  J Neurosci       Date:  2021-04-07       Impact factor: 6.167

6.  Dementia in Latin America: Paving the way toward a regional action plan.

Authors:  Mario Alfredo Parra; Sandra Baez; Lucas Sedeño; Cecilia Gonzalez Campo; Hernando Santamaría-García; Ivan Aprahamian; Paulo Hf Bertolucci; Julian Bustin; Maria Aparecida Camargos Bicalho; Carlos Cano-Gutierrez; Paulo Caramelli; Marcia L F Chaves; Patricia Cogram; Bárbara Costa Beber; Felipe A Court; Leonardo Cruz de Souza; Nilton Custodio; Andres Damian; Myriam de la Cruz; Roberta Diehl Rodriguez; Sonia Maria Dozzi Brucki; Lais Fajersztajn; Gonzalo A Farías; Fernanda G De Felice; Raffaele Ferrari; Fabricio Ferreira de Oliveira; Sergio T Ferreira; Ceres Ferretti; Marcio Luiz Figueredo Balthazar; Norberto Anizio Ferreira Frota; Patricio Fuentes; Adolfo M García; Patricia J Garcia; Fábio Henrique de Gobbi Porto; Lissette Duque Peñailillo; Henry Willy Engler; Irene Maier; Ignacio F Mata; Christian Gonzalez-Billault; Oscar L Lopez; Laura Morelli; Ricardo Nitrini; Yakeel T Quiroz; Alejandra Guerrero Barragan; David Huepe; Fabricio Joao Pio; Claudia Kimie Suemoto; Renata Kochhann; Silvia Kochen; Fiona Kumfor; Serggio Lanata; Bruce Miller; Leticia Lessa Mansur; Mirna Lie Hosogi; Patricia Lillo; Jorge Llibre Guerra; David Lira; Francisco Lopera; Adelina Comas; José Alberto Avila-Funes; Ana Luisa Sosa; Claudia Ramos; Elisa de Paula França Resende; Heather M Snyder; Ioannis Tarnanas; Jenifer Yokoyama; Juan Llibre; Juan Felipe Cardona; Kate Possin; Kenneth S Kosik; Rosa Montesinos; Sebastian Moguilner; Patricia Cristina Lourdes Solis; Renata Eloah de Lucena Ferretti-Rebustini; Jeronimo Martin Ramirez; Diana Matallana; Lingani Mbakile-Mahlanza; Alyne Mendonça Marques Ton; Ronnielly Melo Tavares; Eliane C Miotto; Graciela Muniz-Terrera; Luis Arnoldo Muñoz-Nevárez; David Orozco; Maira Okada de Oliveira; Olivier Piguet; Maritza Pintado Caipa; Stefanie Danielle Piña Escudero; Lucas Porcello Schilling; André Luiz Rodrigues Palmeira; Mônica Sanches Yassuda; Jose Manuel Santacruz-Escudero; Rodrigo Bernardo Serafim; Jerusa Smid; Andrea Slachevsky; Cecilia Serrano; Marcio Soto-Añari; Leonel Tadao Takada; Lea Tenenholz Grinberg; Antonio Lucio Teixeira; Maira Tonidandel Barbosa; Dominic Trépel; Agustin Ibanez
Journal:  Alzheimers Dement       Date:  2020-11-20       Impact factor: 21.566

Review 7.  The Multi-Partner Consortium to Expand Dementia Research in Latin America (ReDLat): Driving Multicentric Research and Implementation Science.

Authors:  Agustin Ibanez; Jennifer S Yokoyama; Katherine L Possin; Diana Matallana; Francisco Lopera; Ricardo Nitrini; Leonel T Takada; Nilton Custodio; Ana Luisa Sosa Ortiz; José Alberto Avila-Funes; Maria Isabel Behrens; Andrea Slachevsky; Richard M Myers; J Nicholas Cochran; Luis Ignacio Brusco; Martin A Bruno; Sonia M D Brucki; Stefanie Danielle Pina-Escudero; Maira Okada de Oliveira; Patricio Donnelly Kehoe; Adolfo M Garcia; Juan Felipe Cardona; Hernando Santamaria-Garcia; Sebastian Moguilner; Claudia Duran-Aniotz; Enzo Tagliazucchi; Marcelo Maito; Erika Mariana Longoria Ibarrola; Maritza Pintado-Caipa; Maria Eugenia Godoy; Vera Bakman; Shireen Javandel; Kenneth S Kosik; Victor Valcour; Bruce L Miller
Journal:  Front Neurol       Date:  2021-03-11       Impact factor: 4.003

8.  White matter microstructure alterations in frontotemporal dementia: Phenotype-associated signatures and single-subject interpretation.

Authors:  Mary Clare McKenna; Marlene Tahedl; Aizuri Murad; Jasmin Lope; Orla Hardiman; Siobhan Hutchinson; Peter Bede
Journal:  Brain Behav       Date:  2022-01-24       Impact factor: 2.708

9.  Genetic Algorithms for Optimized Diagnosis of Alzheimer's Disease and Frontotemporal Dementia Using Fluorodeoxyglucose Positron Emission Tomography Imaging.

Authors:  Josefa Díaz-Álvarez; Jordi A Matias-Guiu; María Nieves Cabrera-Martín; Vanesa Pytel; Ignacio Segovia-Ríos; Fernando García-Gutiérrez; Laura Hernández-Lorenzo; Jorge Matias-Guiu; José Luis Carreras; José L Ayala
Journal:  Front Aging Neurosci       Date:  2022-02-03       Impact factor: 5.750

10.  Dynamic brain fluctuations outperform connectivity measures and mirror pathophysiological profiles across dementia subtypes: A multicenter study.

Authors:  Sebastian Moguilner; Adolfo M García; Yonatan Sanz Perl; Enzo Tagliazucchi; Olivier Piguet; Fiona Kumfor; Pablo Reyes; Diana Matallana; Lucas Sedeño; Agustín Ibáñez
Journal:  Neuroimage       Date:  2020-11-02       Impact factor: 6.556

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