Literature DB >> 31488661

The formation of human populations in South and Central Asia.

Vagheesh M Narasimhan1, Nick Patterson2,3, Priya Moorjani4,5, Nadin Rohland6,7, Rebecca Bernardos6, Swapan Mallick6,7,8, Iosif Lazaridis6, Nathan Nakatsuka6,9, Iñigo Olalde6, Mark Lipson6, Alexander M Kim6,10, Luca M Olivieri11, Alfredo Coppa12, Massimo Vidale11,13, James Mallory14, Vyacheslav Moiseyev15, Egor Kitov16,17,18, Janet Monge19, Nicole Adamski6,8, Neel Alex20, Nasreen Broomandkhoshbacht6,8, Francesca Candilio21,22, Kimberly Callan6,8, Olivia Cheronet21,23,24, Brendan J Culleton25, Matthew Ferry6,8, Daniel Fernandes21,23,24,26, Suzanne Freilich24, Beatriz Gamarra21,23,27, Daniel Gaudio21,23, Mateja Hajdinjak28, Éadaoin Harney6,8,29, Thomas K Harper30, Denise Keating21, Ann Marie Lawson6,8, Matthew Mah6,7,8, Kirsten Mandl24, Megan Michel6,8, Mario Novak21,31, Jonas Oppenheimer6,8, Niraj Rai32,33, Kendra Sirak6,21,34, Viviane Slon28, Kristin Stewardson6,8, Fatma Zalzala6,8, Zhao Zhang6, Gaziz Akhatov17, Anatoly N Bagashev35, Alessandra Bagnera11, Bauryzhan Baitanayev17, Julio Bendezu-Sarmiento36, Arman A Bissembaev17,37, Gian Luca Bonora38, Temirlan T Chargynov39, Tatiana Chikisheva40, Petr K Dashkovskiy41, Anatoly Derevianko40, Miroslav Dobeš42, Katerina Douka43,44, Nadezhda Dubova16, Meiram N Duisengali37, Dmitry Enshin35, Andrey Epimakhov45,46, Alexey V Fribus47, Dorian Fuller48,49, Alexander Goryachev35, Andrey Gromov15, Sergey P Grushin50, Bryan Hanks51, Margaret Judd51, Erlan Kazizov17, Aleksander Khokhlov52, Aleksander P Krygin53, Elena Kupriyanova54, Pavel Kuznetsov52, Donata Luiselli55, Farhod Maksudov56, Aslan M Mamedov57, Talgat B Mamirov17, Christopher Meiklejohn58, Deborah C Merrett59, Roberto Micheli11,60, Oleg Mochalov52, Samariddin Mustafokulov56,61, Ayushi Nayak43, Davide Pettener62, Richard Potts63, Dmitry Razhev35, Marina Rykun64, Stefania Sarno62, Tatyana M Savenkova65, Kulyan Sikhymbaeva66, Sergey M Slepchenko35, Oroz A Soltobaev39, Nadezhda Stepanova40, Svetlana Svyatko15,67, Kubatbek Tabaldiev68, Maria Teschler-Nicola24,69, Alexey A Tishkin70, Vitaly V Tkachev71, Sergey Vasilyev16,72, Petr Velemínský73, Dmitriy Voyakin17,74, Antonina Yermolayeva17, Muhammad Zahir43,75, Valery S Zubkov76, Alisa Zubova15, Vasant S Shinde77, Carles Lalueza-Fox78, Matthias Meyer28, David Anthony79, Nicole Boivin43, Kumarasamy Thangaraj32, Douglas J Kennett25,30,80, Michael Frachetti81,82, Ron Pinhasi83,24, David Reich1,7,8,84.   

Abstract

By sequencing 523 ancient humans, we show that the primary source of ancestry in modern South Asians is a prehistoric genetic gradient between people related to early hunter-gatherers of Iran and Southeast Asia. After the Indus Valley Civilization's decline, its people mixed with individuals in the southeast to form one of the two main ancestral populations of South Asia, whose direct descendants live in southern India. Simultaneously, they mixed with descendants of Steppe pastoralists who, starting around 4000 years ago, spread via Central Asia to form the other main ancestral population. The Steppe ancestry in South Asia has the same profile as that in Bronze Age Eastern Europe, tracking a movement of people that affected both regions and that likely spread the distinctive features shared between Indo-Iranian and Balto-Slavic languages.
Copyright © 2019 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

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Year:  2019        PMID: 31488661      PMCID: PMC6822619          DOI: 10.1126/science.aat7487

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  75 in total

1.  Complete mitochondrial genome sequence of a Middle Pleistocene cave bear reconstructed from ultrashort DNA fragments.

Authors:  Jesse Dabney; Michael Knapp; Isabelle Glocke; Marie-Theres Gansauge; Antje Weihmann; Birgit Nickel; Cristina Valdiosera; Nuria García; Svante Pääbo; Juan-Luis Arsuaga; Matthias Meyer
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-09       Impact factor: 11.205

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Authors:  James F O'Connell; Jim Allen; Martin A J Williams; Alan N Williams; Chris S M Turney; Nigel A Spooner; Johan Kamminga; Graham Brown; Alan Cooper
Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-06       Impact factor: 11.205

3.  The Kalash Genetic Isolate? The Evidence for Recent Admixture.

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Journal:  Am J Hum Genet       Date:  2016-02-04       Impact factor: 11.025

4.  Genetic Affinity of the Bhil, Kol and Gond Mentioned in Epic Ramayana.

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Journal:  PLoS One       Date:  2015-06-10       Impact factor: 3.240

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Journal:  Nature       Date:  2014-09-18       Impact factor: 49.962

6.  Genetic origins of the Minoans and Mycenaeans.

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Journal:  Nature       Date:  2017-08-02       Impact factor: 49.962

7.  The Beaker phenomenon and the genomic transformation of northwest Europe.

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Journal:  Nature       Date:  2018-02-21       Impact factor: 49.962

8.  Reconstructing Indian population history.

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9.  An integrated map of genetic variation from 1,092 human genomes.

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Journal:  Nature       Date:  2012-11-01       Impact factor: 49.962

10.  The genetic prehistory of the Baltic Sea region.

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Journal:  Nat Commun       Date:  2018-01-30       Impact factor: 14.919

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1.  New insights into the fine-scale history of western-eastern admixture of the northwestern Chinese population in the Hexi Corridor via genome-wide genetic legacy.

Authors:  Hongbin Yao; Mengge Wang; Xing Zou; Yingxiang Li; Xiaomin Yang; Ailin Li; Hui-Yuan Yeh; Peixin Wang; Zheng Wang; Jingya Bai; Jianxin Guo; Jinwen Chen; Xiao Ding; Yan Zhang; Baoquan Lin; Chuan-Chao Wang; Guanglin He
Journal:  Mol Genet Genomics       Date:  2021-03-01       Impact factor: 3.291

Review 2.  Inferring evolutionary dynamics of mutation rates through the lens of mutation spectrum variation.

Authors:  Jedidiah Carlson; William S DeWitt; Kelley Harris
Journal:  Curr Opin Genet Dev       Date:  2020-06-30       Impact factor: 5.578

3.  Dairying, diseases and the evolution of lactase persistence in Europe.

Authors:  Richard P Evershed; George Davey Smith; Mélanie Roffet-Salque; Adrian Timpson; Yoan Diekmann; Matthew S Lyon; Lucy J E Cramp; Emmanuelle Casanova; Jessica Smyth; Helen L Whelton; Julie Dunne; Veronika Brychova; Lucija Šoberl; Pascale Gerbault; Rosalind E Gillis; Volker Heyd; Emily Johnson; Iain Kendall; Katie Manning; Arkadiusz Marciniak; Alan K Outram; Jean-Denis Vigne; Stephen Shennan; Andrew Bevan; Sue Colledge; Lyndsay Allason-Jones; Luc Amkreutz; Alexandra Anders; Rose-Marie Arbogast; Adrian Bălăşescu; Eszter Bánffy; Alistair Barclay; Anja Behrens; Peter Bogucki; Ángel Carrancho Alonso; José Miguel Carretero; Nigel Cavanagh; Erich Claßen; Hipolito Collado Giraldo; Matthias Conrad; Piroska Csengeri; Lech Czerniak; Maciej Dębiec; Anthony Denaire; László Domboróczki; Christina Donald; Julia Ebert; Christopher Evans; Marta Francés-Negro; Detlef Gronenborn; Fabian Haack; Matthias Halle; Caroline Hamon; Roman Hülshoff; Michael Ilett; Eneko Iriarte; János Jakucs; Christian Jeunesse; Melanie Johnson; Andy M Jones; Necmi Karul; Dmytro Kiosak; Nadezhda Kotova; Rüdiger Krause; Saskia Kretschmer; Marta Krüger; Philippe Lefranc; Olivia Lelong; Eva Lenneis; Andrey Logvin; Friedrich Lüth; Tibor Marton; Jane Marley; Richard Mortimer; Luiz Oosterbeek; Krisztián Oross; Juraj Pavúk; Joachim Pechtl; Pierre Pétrequin; Joshua Pollard; Richard Pollard; Dominic Powlesland; Joanna Pyzel; Pál Raczky; Andrew Richardson; Peter Rowe; Stephen Rowland; Ian Rowlandson; Thomas Saile; Katalin Sebők; Wolfram Schier; Germo Schmalfuß; Svetlana Sharapova; Helen Sharp; Alison Sheridan; Irina Shevnina; Iwona Sobkowiak-Tabaka; Peter Stadler; Harald Stäuble; Astrid Stobbe; Darko Stojanovski; Nenad Tasić; Ivo van Wijk; Ivana Vostrovská; Jasna Vuković; Sabine Wolfram; Andrea Zeeb-Lanz; Mark G Thomas
Journal:  Nature       Date:  2022-07-27       Impact factor: 69.504

4.  A Dynamic 6,000-Year Genetic History of Eurasia's Eastern Steppe.

Authors:  Choongwon Jeong; Ke Wang; Shevan Wilkin; William Timothy Treal Taylor; Bryan K Miller; Jan H Bemmann; Raphaela Stahl; Chelsea Chiovelli; Florian Knolle; Sodnom Ulziibayar; Dorjpurev Khatanbaatar; Diimaajav Erdenebaatar; Ulambayar Erdenebat; Ayudai Ochir; Ganbold Ankhsanaa; Chuluunkhuu Vanchigdash; Battuga Ochir; Chuluunbat Munkhbayar; Dashzeveg Tumen; Alexey Kovalev; Nikolay Kradin; Bilikto A Bazarov; Denis A Miyagashev; Prokopiy B Konovalov; Elena Zhambaltarova; Alicia Ventresca Miller; Wolfgang Haak; Stephan Schiffels; Johannes Krause; Nicole Boivin; Myagmar Erdene; Jessica Hendy; Christina Warinner
Journal:  Cell       Date:  2020-11-05       Impact factor: 41.582

5.  Summix: A method for detecting and adjusting for population structure in genetic summary data.

Authors:  Ian S Arriaga-MacKenzie; Gregory Matesi; Samuel Chen; Alexandria Ronco; Katie M Marker; Jordan R Hall; Ryan Scherenberg; Mobin Khajeh-Sharafabadi; Yinfei Wu; Christopher R Gignoux; Megan Null; Audrey E Hendricks
Journal:  Am J Hum Genet       Date:  2021-06-21       Impact factor: 11.025

6.  An Ancient Harappan Genome Lacks Ancestry from Steppe Pastoralists or Iranian Farmers.

Authors:  Vasant Shinde; Vagheesh M Narasimhan; Nadin Rohland; Swapan Mallick; Matthew Mah; Mark Lipson; Nathan Nakatsuka; Nicole Adamski; Nasreen Broomandkhoshbacht; Matthew Ferry; Ann Marie Lawson; Megan Michel; Jonas Oppenheimer; Kristin Stewardson; Nilesh Jadhav; Yong Jun Kim; Malavika Chatterjee; Avradeep Munshi; Amrithavalli Panyam; Pranjali Waghmare; Yogesh Yadav; Himani Patel; Amit Kaushik; Kumarasamy Thangaraj; Matthias Meyer; Nick Patterson; Niraj Rai; David Reich
Journal:  Cell       Date:  2019-09-05       Impact factor: 41.582

Review 7.  Molecular genetic landscape of hereditary hearing loss in Pakistan.

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Journal:  Hum Genet       Date:  2021-07-25       Impact factor: 4.132

8.  Using Y-chromosome capture enrichment to resolve haplogroup H2 shows new evidence for a two-path Neolithic expansion to Western Europe.

Authors:  Adam B Rohrlach; Luka Papac; Ainash Childebayeva; Maïté Rivollat; Vanessa Villalba-Mouco; Gunnar U Neumann; Sandra Penske; Eirini Skourtanioti; Marieke van de Loosdrecht; Murat Akar; Kamen Boyadzhiev; Yavor Boyadzhiev; Marie-France Deguilloux; Miroslav Dobeš; Yilmaz S Erdal; Michal Ernée; Marcella Frangipane; Mirosław Furmanek; Susanne Friederich; Emmanuel Ghesquière; Agata Hałuszko; Svend Hansen; Mario Küßner; Marcello Mannino; Rana Özbal; Sabine Reinhold; Stéphane Rottier; Domingo Carlos Salazar-García; Jorge Soler Diaz; Philipp W Stockhammer; Consuelo Roca de Togores Muñoz; K Aslihan Yener; Cosimo Posth; Johannes Krause; Alexander Herbig; Wolfgang Haak
Journal:  Sci Rep       Date:  2021-07-22       Impact factor: 4.379

9.  Human mobility at Tell Atchana (Alalakh), Hatay, Turkey during the 2nd millennium BC: Integration of isotopic and genomic evidence.

Authors:  Tara Ingman; Stefanie Eisenmann; Eirini Skourtanioti; Murat Akar; Jana Ilgner; Guido Alberto Gnecchi Ruscone; Petrus le Roux; Rula Shafiq; Gunnar U Neumann; Marcel Keller; Cäcilia Freund; Sara Marzo; Mary Lucas; Johannes Krause; Patrick Roberts; K Aslıhan Yener; Philipp W Stockhammer
Journal:  PLoS One       Date:  2021-06-30       Impact factor: 3.240

Review 10.  Genetics of Body Fat Distribution: Comparative Analyses in Populations with European, Asian and African Ancestries.

Authors:  Chang Sun; Peter Kovacs; Esther Guiu-Jurado
Journal:  Genes (Basel)       Date:  2021-05-29       Impact factor: 4.096

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