Literature DB >> 31483526

Ultrafast magnetic resonance spectroscopic imaging using SPICE with learned subspaces.

Fan Lam1,2, Yudu Li2,3, Rong Guo2,3, Bryan Clifford2,3, Zhi-Pei Liang2,3.   

Abstract

PURPOSE: To develop a subspace learning method for the recently proposed subspace-based MRSI approach known as SPICE, and achieve ultrafast 1 H-MRSI of the brain. THEORY AND METHODS: A novel strategy is formulated to learn a low-dimensional subspace representation of MR spectra from specially acquired training data and use the learned subspace for general MRSI experiments. Specifically, the subspace learning problem is formulated as learning "empirical" distributions of molecule-specific spectral parameters (e.g., concentrations, lineshapes, and frequency shifts) by integrating physics-based model and the training data. The learned spectral parameters and quantum mechanical simulation basis can then be combined to construct acquisition-specific subspace for spatiospectral encoding and processing. High-resolution MRSI acquisitions combining ultrashort-TE/short-TR excitation, sparse sampling, and the elimination of water suppression have been performed to evaluate the feasibility of the proposed method.
RESULTS: The accuracy of the learned subspace and the capability of the proposed method in producing high-resolution 3D 1 H metabolite maps and high-quality spatially resolved spectra (with a nominal resolution of ∼2.4 × 2.4 × 3 mm3 in 5 minutes) were demonstrated using phantom and in vivo studies. By eliminating water suppression, we are also able to extract valuable information from the water signals for data processing ( B 0 map, frequency drift, and coil sensitivity) as well as for mapping tissue susceptibility and relaxation parameters.
CONCLUSIONS: The proposed method enables ultrafast 1 H-MRSI of the brain using a learned subspace, eliminating the need of acquiring subject-dependent navigator data (known as D 1 ) in the original SPICE technique. It represents a new way to perform MRSI experiments and an important step toward practical applications of high-resolution MRSI.
© 2019 International Society for Magnetic Resonance in Medicine.

Entities:  

Keywords:  MR spectroscopic imaging; no water suppression; rapid spatiospectral encoding; subspace learning; union-of-subspaces model

Year:  2019        PMID: 31483526      PMCID: PMC6824949          DOI: 10.1002/mrm.27980

Source DB:  PubMed          Journal:  Magn Reson Med        ISSN: 0740-3194            Impact factor:   4.668


  44 in total

1.  Time-domain semi-parametric estimation based on a metabolite basis set.

Authors:  H Ratiney; M Sdika; Y Coenradie; S Cavassila; D van Ormondt; D Graveron-Demilly
Journal:  NMR Biomed       Date:  2005-02       Impact factor: 4.044

2.  Volumetric spectroscopic imaging with spiral-based k-space trajectories.

Authors:  E Adalsteinsson; P Irarrazabal; S Topp; C Meyer; A Macovski; D M Spielman
Journal:  Magn Reson Med       Date:  1998-06       Impact factor: 4.668

3.  Fast high-resolution brain metabolite mapping on a clinical 3T MRI by accelerated 1 H-FID-MRSI and low-rank constrained reconstruction.

Authors:  Antoine Klauser; Sebastien Courvoisier; Jeffrey Kasten; Michel Kocher; Matthieu Guerquin-Kern; Dimitri Van De Ville; Francois Lazeyras
Journal:  Magn Reson Med       Date:  2018-12-18       Impact factor: 4.668

4.  Compartmentalized low-rank recovery for high-resolution lipid unsuppressed MRSI.

Authors:  Ipshita Bhattacharya; Mathews Jacob
Journal:  Magn Reson Med       Date:  2016-11-11       Impact factor: 4.668

5.  WET, a T1- and B1-insensitive water-suppression method for in vivo localized 1H NMR spectroscopy.

Authors:  R J Ogg; P B Kingsley; J S Taylor
Journal:  J Magn Reson B       Date:  1994-05

6.  Removal of lipid artifacts in 1H spectroscopic imaging by data extrapolation.

Authors:  C I Haupt; N Schuff; M W Weiner; A A Maudsley
Journal:  Magn Reson Med       Date:  1996-05       Impact factor: 4.668

7.  Spatial mapping of the chemical shift in NMR.

Authors:  P Mansfield
Journal:  Magn Reson Med       Date:  1984-09       Impact factor: 4.668

8.  Accelerated proton echo planar spectroscopic imaging (PEPSI) using GRAPPA with a 32-channel phased-array coil.

Authors:  Shang-Yueh Tsai; Ricardo Otazo; Stefan Posse; Yi-Ru Lin; Hsiao-Wen Chung; Lawrence L Wald; Graham C Wiggins; Fa-Hsuan Lin
Journal:  Magn Reson Med       Date:  2008-05       Impact factor: 4.668

9.  Multisection proton MR spectroscopic imaging of the brain.

Authors:  J H Duyn; J Gillen; G Sobering; P C van Zijl; C T Moonen
Journal:  Radiology       Date:  1993-07       Impact factor: 11.105

10.  Slice-selective FID acquisition, localized by outer volume suppression (FIDLOVS) for (1)H-MRSI of the human brain at 7 T with minimal signal loss.

Authors:  Anke Henning; Alexander Fuchs; James B Murdoch; Peter Boesiger
Journal:  NMR Biomed       Date:  2009-08       Impact factor: 4.044

View more
  14 in total

1.  Novel proton exchange rate MRI presents unique contrast in brains of ischemic stroke patients.

Authors:  Zhenxiong Wang; Mehran Shaghaghi; Shun Zhang; Guiling Zhang; Yiran Zhou; Di Wu; Zhuoli Zhang; Wenzhen Zhu; Kejia Cai
Journal:  J Neurosci Methods       Date:  2020-09-05       Impact factor: 2.390

2.  Uncertainty in denoising of MRSI using low-rank methods.

Authors:  William T Clarke; Mark Chiew
Journal:  Magn Reson Med       Date:  2021-09-21       Impact factor: 3.737

3.  Absolute choline tissue concentration mapping for prostate cancer localization and characterization using 3D 1 H MRSI without water-signal suppression.

Authors:  Nassim Tayari; Alan J Wright; Arend Heerschap
Journal:  Magn Reson Med       Date:  2021-09-23       Impact factor: 3.737

4.  Simultaneous QSM and metabolic imaging of the brain using SPICE: Further improvements in data acquisition and processing.

Authors:  Rong Guo; Yibo Zhao; Yudu Li; Tianyao Wang; Yao Li; Brad Sutton; Zhi-Pei Liang
Journal:  Magn Reson Med       Date:  2020-08-18       Impact factor: 4.668

5.  Spectral Wavelet-feature Analysis and Classification Assisted Denoising for enhancing magnetic resonance spectroscopy.

Authors:  Bing Ji; Zahra Hosseini; Liya Wang; Lei Zhou; Xinhua Tu; Hui Mao
Journal:  NMR Biomed       Date:  2021-03-09       Impact factor: 4.044

6.  Accelerated J-resolved 1 H-MRSI with limited and sparse sampling of ( k , t 1 , t 2 -space.

Authors:  Lihong Tang; Yibo Zhao; Yudu Li; Rong Guo; Bryan Clifford; Georges El Fakhri; Chao Ma; Zhi-Pei Liang; Jie Luo
Journal:  Magn Reson Med       Date:  2020-07-29       Impact factor: 4.668

7.  Whole-brain high-resolution metabolite mapping with 3D compressed-sensing SENSE low-rank 1 H FID-MRSI.

Authors:  Antoine Klauser; Paul Klauser; Frédéric Grouiller; Sébastien Courvoisier; François Lazeyras
Journal:  NMR Biomed       Date:  2021-10-01       Impact factor: 4.478

8.  SNR Enhancement for Multi-TE MRSI Using Joint Low-Dimensional Model and Spatial Constraints.

Authors:  Yahang Li; Zepeng Wang; Fan Lam
Journal:  IEEE Trans Biomed Eng       Date:  2022-09-19       Impact factor: 4.756

9.  Machine Learning-Enabled High-Resolution Dynamic Deuterium MR Spectroscopic Imaging.

Authors:  Yudu Li; Yibo Zhao; Rong Guo; Tao Wang; Yi Zhang; Matthew Chrostek; Walter C Low; Xiao-Hong Zhu; Zhi-Pei Liang; Wei Chen
Journal:  IEEE Trans Med Imaging       Date:  2021-11-30       Impact factor: 10.048

Review 10.  Accelerated MR spectroscopic imaging-a review of current and emerging techniques.

Authors:  Wolfgang Bogner; Ricardo Otazo; Anke Henning
Journal:  NMR Biomed       Date:  2020-05-12       Impact factor: 4.044

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.