Literature DB >> 34319872

Machine Learning-Enabled High-Resolution Dynamic Deuterium MR Spectroscopic Imaging.

Yudu Li, Yibo Zhao, Rong Guo, Tao Wang, Yi Zhang, Matthew Chrostek, Walter C Low, Xiao-Hong Zhu, Zhi-Pei Liang, Wei Chen.   

Abstract

Deuterium magnetic resonance spectroscopic imaging (DMRSI) has recently been recognized as a potentially powerful tool for noninvasive imaging of brain energy metabolism and tumor. However, the low sensitivity of DMRSI has significantly limited its utility for both research and clinical applications. This work presents a novel machine learning-based method to address this limitation. The proposed method synergistically integrates physics-based subspace modeling and data-driven deep learning for effective denoising, making high-resolution dynamic DMRSI possible. Specifically, a novel subspace model was used to represent the dynamic DMRSI signals; deep neural networks were trained to capture the low-dimensional manifolds of the spectral and temporal distributions of practical dynamic DMRSI data. The learned subspace and manifold structures were integrated via a regularization formulation to remove measurement noise. Theoretical analysis, computer simulations, and in vivo experiments have been conducted to demonstrate the denoising efficacy of the proposed method which enabled high-resolution imaging capability. The translational potential was demonstrated in tumor-bearing rats, where the Warburg effect associated with cancer metabolism and tumor heterogeneity were successfully captured. The new method may not only provide an effective tool to enhance the sensitivity of DMRSI for basic research and clinical applications but also provide a framework for denoising other spatiospectral data.

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Year:  2021        PMID: 34319872      PMCID: PMC8675063          DOI: 10.1109/TMI.2021.3101149

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  37 in total

1.  DEUTERIUM AS AN INDICATOR IN THE STUDY OF INTERMEDIARY METABOLISM.

Authors:  R Schoenheimer; D Rittenberg
Journal:  Science       Date:  1935-08-16       Impact factor: 47.728

2.  Constrained Magnetic Resonance Spectroscopic Imaging by Learning Nonlinear Low-Dimensional Models.

Authors:  Fan Lam; Yahang Li; Xi Peng
Journal:  IEEE Trans Med Imaging       Date:  2019-07-23       Impact factor: 10.048

3.  Renal distribution and metabolism of [2H9]choline. A 2H NMR and MRI study.

Authors:  J Eng; B A Berkowitz; R S Balaban
Journal:  NMR Biomed       Date:  1990-08       Impact factor: 4.044

4.  High-resolution dynamic 31 P-MRSI using a low-rank tensor model.

Authors:  Chao Ma; Bryan Clifford; Yuchi Liu; Yuning Gu; Fan Lam; Xin Yu; Zhi-Pei Liang
Journal:  Magn Reson Med       Date:  2017-05-28       Impact factor: 4.668

5.  Denoising MR spectroscopic imaging data with low-rank approximations.

Authors:  Hien M Nguyen; Xi Peng; Minh N Do; Zhi-Pei Liang
Journal:  IEEE Trans Biomed Eng       Date:  2012-10-09       Impact factor: 4.538

6.  Accelerated MR parameter mapping with low-rank and sparsity constraints.

Authors:  Bo Zhao; Wenmiao Lu; T Kevin Hitchens; Fan Lam; Chien Ho; Zhi-Pei Liang
Journal:  Magn Reson Med       Date:  2014-08-27       Impact factor: 4.668

7.  Glucose production pathways by 2H and 13C NMR in patients with HIV-associated lipoatrophy.

Authors:  Brian C Weis; David Margolis; Shawn C Burgess; Matthew E Merritt; Holly Wise; A Dean Sherry; Craig R Malloy
Journal:  Magn Reson Med       Date:  2004-04       Impact factor: 4.668

8.  Glucose metabolism in brown adipose tissue determined by deuterium metabolic imaging in rats.

Authors:  Mette Ji Riis-Vestergaard; Christoffer Laustsen; Christian Østergaard Mariager; Rolf F Schulte; Steen Bønløkke Pedersen; Bjørn Richelsen
Journal:  Int J Obes (Lond)       Date:  2020-01-21       Impact factor: 5.095

Review 9.  Understanding the Warburg effect: the metabolic requirements of cell proliferation.

Authors:  Matthew G Vander Heiden; Lewis C Cantley; Craig B Thompson
Journal:  Science       Date:  2009-05-22       Impact factor: 47.728

10.  Separation of Metabolites and Macromolecules for Short-TE 1H-MRSI Using Learned Component-Specific Representations.

Authors:  Yahang Li; Zepeng Wang; Ruoyu Sun; Fan Lam
Journal:  IEEE Trans Med Imaging       Date:  2021-04-01       Impact factor: 10.048

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  1 in total

1.  Deuterium metabolic imaging in the human brain at 9.4 Tesla with high spatial and temporal resolution.

Authors:  Loreen Ruhm; Nikolai Avdievich; Theresia Ziegs; Armin M Nagel; Henk M De Feyter; Robin A de Graaf; Anke Henning
Journal:  Neuroimage       Date:  2021-10-09       Impact factor: 6.556

  1 in total

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