Literature DB >> 31388144

Multivalent m6A motifs promote phase separation of YTHDF proteins.

Yifei Gao1, Gaofeng Pei1, Dongxue Li1, Ru Li1, Yanqiu Shao2, Qiangfeng Cliff Zhang2, Pilong Li3.   

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Year:  2019        PMID： 31388144      PMCID： PMC6796879          DOI： 10.1038/s41422-019-0210-3

Source DB:  PubMed          Journal:  Cell Res        ISSN： 1001-0602            Impact factor:   25.617


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  14 in total

1.  Structure of the YTH domain of human YTHDF2 in complex with an m(6)A mononucleotide reveals an aromatic cage for m(6)A recognition.

Authors:  Fudong Li; Debiao Zhao; Jihui Wu; Yunyu Shi
Journal:  Cell Res       Date:  2014-11-21       Impact factor: 25.617

Review 2.  Chemical Modifications in the Life of an mRNA Transcript.

Authors:  Sigrid Nachtergaele; Chuan He
Journal:  Annu Rev Genet       Date:  2018-09-19       Impact factor: 16.830

3.  Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons.

Authors:  Kate D Meyer; Yogesh Saletore; Paul Zumbo; Olivier Elemento; Christopher E Mason; Samie R Jaffrey
Journal:  Cell       Date:  2012-05-17       Impact factor: 41.582

Review 4.  Reading m6A in the Transcriptome: m6A-Binding Proteins.

Authors:  Deepak P Patil; Brian F Pickering; Samie R Jaffrey
Journal:  Trends Cell Biol       Date:  2017-11-02       Impact factor: 20.808

5.  Single-nucleotide-resolution mapping of m6A and m6Am throughout the transcriptome.

Authors:  Bastian Linder; Anya V Grozhik; Anthony O Olarerin-George; Cem Meydan; Christopher E Mason; Samie R Jaffrey
Journal:  Nat Methods       Date:  2015-06-29       Impact factor: 28.547

6.  A majority of m6A residues are in the last exons, allowing the potential for 3' UTR regulation.

Authors:  Shengdong Ke; Endalkachew A Alemu; Claudia Mertens; Emily Conn Gantman; John J Fak; Aldo Mele; Bhagwattie Haripal; Ilana Zucker-Scharff; Michael J Moore; Christopher Y Park; Cathrine Broberg Vågbø; Anna Kusśnierczyk; Arne Klungland; James E Darnell; Robert B Darnell
Journal:  Genes Dev       Date:  2015-09-24       Impact factor: 11.361

Review 7.  RNA N6-methyladenosine modification in cancers: current status and perspectives.

Authors:  Xiaolan Deng; Rui Su; Hengyou Weng; Huilin Huang; Zejuan Li; Jianjun Chen
Journal:  Cell Res       Date:  2018-04-23       Impact factor: 25.617

8.  Mutations in prion-like domains in hnRNPA2B1 and hnRNPA1 cause multisystem proteinopathy and ALS.

Authors:  Hong Joo Kim; Nam Chul Kim; Yong-Dong Wang; Emily A Scarborough; Jennifer Moore; Zamia Diaz; Kyle S MacLea; Brian Freibaum; Songqing Li; Amandine Molliex; Anderson P Kanagaraj; Robert Carter; Kevin B Boylan; Aleksandra M Wojtas; Rosa Rademakers; Jack L Pinkus; Steven A Greenberg; John Q Trojanowski; Bryan J Traynor; Bradley N Smith; Simon Topp; Athina-Soragia Gkazi; Jack Miller; Christopher E Shaw; Michael Kottlors; Janbernd Kirschner; Alan Pestronk; Yun R Li; Alice Flynn Ford; Aaron D Gitler; Michael Benatar; Oliver D King; Virginia E Kimonis; Eric D Ross; Conrad C Weihl; James Shorter; J Paul Taylor
Journal:  Nature       Date:  2013-03-03       Impact factor: 49.962

Review 9.  YTH Domain: A Family of N6-methyladenosine (m6A) Readers.

Authors:  Shanhui Liao; Hongbin Sun; Chao Xu
Journal:  Genomics Proteomics Bioinformatics       Date:  2018-04-30       Impact factor: 7.691

10.  Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq.

Authors:  Dan Dominissini; Sharon Moshitch-Moshkovitz; Schraga Schwartz; Mali Salmon-Divon; Lior Ungar; Sivan Osenberg; Karen Cesarkas; Jasmine Jacob-Hirsch; Ninette Amariglio; Martin Kupiec; Rotem Sorek; Gideon Rechavi
Journal:  Nature       Date:  2012-04-29       Impact factor: 49.962
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  40 in total

1.  Occurrence and Functions of m6A and Other Covalent Modifications in Plant mRNA.

Authors:  Laura Arribas-Hernández; Peter Brodersen
Journal:  Plant Physiol       Date:  2019-11-20       Impact factor: 8.340

Review 2.  Protein phase separation: A novel therapy for cancer?

Authors:  Wei Wang; Yingqian Chen; Aixiao Xu; Minyi Cai; Ji Cao; Hong Zhu; Bo Yang; Xuejing Shao; Meidan Ying; Qiaojun He
Journal:  Br J Pharmacol       Date:  2020-09-28       Impact factor: 8.739

Review 3.  RNA N6-Methyladenosine and the Regulation of RNA Localization and Function in the Brain.

Authors:  Sachithrani U Madugalle; Kate Meyer; Dan Ohtan Wang; Timothy W Bredy
Journal:  Trends Neurosci       Date:  2020-10-08       Impact factor: 13.837

Review 4.  Phase separation drives tumor pathogenesis and evolution: all roads lead to Rome.

Authors:  Xiang Gu; Ai Zhuang; Jie Yu; Peiwei Chai; Renbing Jia; Jing Ruan
Journal:  Oncogene       Date:  2022-02-08       Impact factor: 9.867

5.  Nuclear import receptors and hnRNPK mediates nuclear import and stress granule localization of SIRLOIN.

Authors:  Jialin Yao; Yingfeng Tu; Congcong Shen; Qiao Zhou; Hengyi Xiao; Da Jia; Qingxiang Sun
Journal:  Cell Mol Life Sci       Date:  2021-10-23       Impact factor: 9.261

6.  Probing Liquid-Liquid Phase Separation of RNA-Binding Proteins In Vitro and In Vivo.

Authors:  Stephanie Heinrich; Maria Hondele
Journal:  Methods Mol Biol       Date:  2022

Review 7.  Novel insights into roles of N6-methyladenosine reader YTHDF2 in cancer progression.

Authors:  Rui Liu; Yachun Jia; Guangyao Kong; Aili He
Journal:  J Cancer Res Clin Oncol       Date:  2022-06-28       Impact factor: 4.322

8.  Enhancer RNA m6A methylation facilitates transcriptional condensate formation and gene activation.

Authors:  Joo-Hyung Lee; Ruoyu Wang; Feng Xiong; Joanna Krakowiak; Zian Liao; Phuoc T Nguyen; Elena V Moroz-Omori; Jiaofang Shao; Xiaoyu Zhu; Michael J Bolt; Haoyi Wu; Pankaj K Singh; Mingjun Bi; Caleb J Shi; Naadir Jamal; Guojie Li; Ragini Mistry; Sung Yun Jung; Kuang-Lei Tsai; Josephine C Ferreon; Fabio Stossi; Amedeo Caflisch; Zhijie Liu; Michael A Mancini; Wenbo Li
Journal:  Mol Cell       Date:  2021-08-09       Impact factor: 19.328

Review 9.  RNA and liquid-liquid phase separation.

Authors:  Qi Guo; Xiangmin Shi; Xiangting Wang
Journal:  Noncoding RNA Res       Date:  2021-04-28

10.  The m6A reading protein YTHDF3 potentiates tumorigenicity of cancer stem-like cells in ocular melanoma through facilitating CTNNB1 translation.

Authors:  Yangfan Xu; Xiaoyu He; Shanzheng Wang; Baofa Sun; Ruobing Jia; Peiwei Chai; Fang Li; Ying Yang; Shengfang Ge; Renbing Jia; Yun-Gui Yang; Xianqun Fan
Journal:  Oncogene       Date:  2022-02-03       Impact factor: 9.867
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