Literature DB >> 31317215

It is all about the process(ing): P-body granules and the regulation of signal transduction.

B Zhang1,2, P K Herman3.   

Abstract

The eukaryotic cell is subdivided into distinct functional domains by the presence of both membrane-bound and membraneless organelles. The latter include cytoplasmic granules, like the Processing-body (P-body), that are induced in response to stress and contain specific sets of mRNAs and proteins. Although P-bodies have been evolutionarily conserved, we do not yet understand the full extent of their biological functions in the cell. Early studies suggested that these structures might be sites of mRNA decay as the first protein constituents identified were enzymes involved in mRNA processing. However, more recent work indicates that this is not likely to be the primary function of these granules and has even suggested that P-bodies are sites of long-term mRNA storage. Interestingly, P-bodies and other ribonucleoprotein granules have been found to also contain a variety of signaling molecules, including protein kinases and phosphatases key to the normal control of cell growth and survival. Therefore, P-bodies could have a role in the modulation of cell signaling during particular types of stress. This review discusses both the general implications of such a proposal and one particular example that illustrates how the granule recruitment of a protein kinase can impact overall cell physiology.

Entities:  

Keywords:  Hrr25/CK1 protein kinase; Meiosis; Membraneless organelles; Neurodegenerative disease; Processing-bodies; Signal transduction; mRNA storage

Mesh:

Substances:

Year:  2019        PMID: 31317215      PMCID: PMC6980427          DOI: 10.1007/s00294-019-01016-3

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  62 in total

1.  Opposing action of casein kinase 1 and calcineurin in nucleo-cytoplasmic shuttling of mammalian translation initiation factor eIF6.

Authors:  Arunima Biswas; Shaeri Mukherjee; Supratik Das; Dennis Shields; Chi Wing Chow; Umadas Maitra
Journal:  J Biol Chem       Date:  2010-11-17       Impact factor: 5.157

Review 2.  Stress granules: the Tao of RNA triage.

Authors:  Paul Anderson; Nancy Kedersha
Journal:  Trends Biochem Sci       Date:  2008-03       Impact factor: 13.807

3.  Germline P granules are liquid droplets that localize by controlled dissolution/condensation.

Authors:  Clifford P Brangwynne; Christian R Eckmann; David S Courson; Agata Rybarska; Carsten Hoege; Jöbin Gharakhani; Frank Jülicher; Anthony A Hyman
Journal:  Science       Date:  2009-05-21       Impact factor: 47.728

Review 4.  RNA granules: post-transcriptional and epigenetic modulators of gene expression.

Authors:  Paul Anderson; Nancy Kedersha
Journal:  Nat Rev Mol Cell Biol       Date:  2009-06       Impact factor: 94.444

5.  Human Dcp2: a catalytically active mRNA decapping enzyme located in specific cytoplasmic structures.

Authors:  Erwin van Dijk; Nicolas Cougot; Sylke Meyer; Sylvie Babajko; Elmar Wahle; Bertrand Séraphin
Journal:  EMBO J       Date:  2002-12-16       Impact factor: 11.598

Review 6.  Protein Phase Separation: A New Phase in Cell Biology.

Authors:  Steven Boeynaems; Simon Alberti; Nicolas L Fawzi; Tanja Mittag; Magdalini Polymenidou; Frederic Rousseau; Joost Schymkowitz; James Shorter; Benjamin Wolozin; Ludo Van Den Bosch; Peter Tompa; Monika Fuxreiter
Journal:  Trends Cell Biol       Date:  2018-03-27       Impact factor: 20.808

7.  Hrr25/CK1δ-directed release of Ltv1 from pre-40S ribosomes is necessary for ribosome assembly and cell growth.

Authors:  Homa Ghalei; Franz X Schaub; Joanne R Doherty; Yoshihiko Noguchi; William R Roush; John L Cleveland; M Elizabeth Stroupe; Katrin Karbstein
Journal:  J Cell Biol       Date:  2015-03-16       Impact factor: 10.539

8.  Promoter sequences direct cytoplasmic localization and translation of mRNAs during starvation in yeast.

Authors:  Brian M Zid; Erin K O'Shea
Journal:  Nature       Date:  2014-08-03       Impact factor: 49.962

9.  Global analysis of yeast mRNPs.

Authors:  Sarah F Mitchell; Saumya Jain; Meipei She; Roy Parker
Journal:  Nat Struct Mol Biol       Date:  2012-12-09       Impact factor: 15.369

Review 10.  Assemblages: functional units formed by cellular phase separation.

Authors:  Jeffrey A Toretsky; Peter E Wright
Journal:  J Cell Biol       Date:  2014-09-01       Impact factor: 10.539

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  6 in total

Review 1.  Microautophagy regulates proteasome homeostasis.

Authors:  Jianhui Li; Mark Hochstrasser
Journal:  Curr Genet       Date:  2020-02-20       Impact factor: 3.886

2.  InsP7 is a small-molecule regulator of NUDT3-mediated mRNA decapping and processing-body dynamics.

Authors:  Soumyadip Sahu; Zhenzhen Wang; Xinfu Jiao; Chunfang Gu; Nikolaus Jork; Christopher Wittwer; Xingyao Li; Sarah Hostachy; Dorothea Fiedler; Huanchen Wang; Henning J Jessen; Megerditch Kiledjian; Stephen B Shears
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-29       Impact factor: 11.205

3.  A distinct P-body-like granule is induced in response to the disruption of microtubule integrity in Saccharomyces cerevisiae.

Authors:  Zachary Hurst; Wenfang Liu; Qian Shi; Paul K Herman
Journal:  Genetics       Date:  2022-08-30       Impact factor: 4.402

4.  The role of stress-activated RNA-protein granules in surviving adversity.

Authors:  Leah E Escalante; Audrey P Gasch
Journal:  RNA       Date:  2021-04-30       Impact factor: 4.942

5.  The RNA-Binding Protein SBR (Dm NXF1) Is Required for the Constitution of Medulla Boundaries in Drosophila melanogaster Optic Lobes.

Authors:  Ludmila Mamon; Anna Yakimova; Daria Kopytova; Elena Golubkova
Journal:  Cells       Date:  2021-05-10       Impact factor: 6.600

Review 6.  mRNA Metabolism in Cardiac Development and Disease: Life After Transcription.

Authors:  Chen Gao; Yibin Wang
Journal:  Physiol Rev       Date:  2019-11-21       Impact factor: 37.312

  6 in total

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