Literature DB >> 12486012

Human Dcp2: a catalytically active mRNA decapping enzyme located in specific cytoplasmic structures.

Erwin van Dijk1, Nicolas Cougot, Sylke Meyer, Sylvie Babajko, Elmar Wahle, Bertrand Séraphin.   

Abstract

We have cloned cDNAs for the human homologues of the yeast Dcp1 and Dcp2 factors involved in the major (5'-3') and NMD mRNA decay pathways. While yeast Dcp1 has been reported to be the decapping enzyme, we show that recombinant human Dcp2 (hDcp2) is enzymatically active. Dcp2 activity appears evolutionarily conserved. Mutational and biochemical analyses indicate that the hDcp2 MutT/Nudix domain mediates this activity. hDcp2 generates m7GDP and 5'-phosphorylated mRNAs that are 5'-3' exonuclease substrates. Corresponding decay intermediates are present in human cells showing the relevance of this activity. hDcp1 and hDcp2 co-localize in cell cytoplasm, consistent with a role in mRNA decay. Interestingly, these two proteins show a non-uniform distribution, accumulating in specific foci.

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Year:  2002        PMID: 12486012      PMCID: PMC139098          DOI: 10.1093/emboj/cdf678

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  37 in total

1.  Identification of a regulated pathway for nuclear pre-mRNA turnover.

Authors:  C Bousquet-Antonelli; C Presutti; D Tollervey
Journal:  Cell       Date:  2000-09-15       Impact factor: 41.582

Review 2.  The MutT proteins or "Nudix" hydrolases, a family of versatile, widely distributed, "housecleaning" enzymes.

Authors:  M J Bessman; D N Frick; S F O'Handley
Journal:  J Biol Chem       Date:  1996-10-11       Impact factor: 5.157

Review 3.  Mechanisms and control of mRNA turnover in Saccharomyces cerevisiae.

Authors:  G Caponigro; R Parker
Journal:  Microbiol Rev       Date:  1996-03

4.  Messenger RNA deadenylylation precedes decapping in mammalian cells.

Authors:  P Couttet; M Fromont-Racine; D Steel; R Pictet; T Grange
Journal:  Proc Natl Acad Sci U S A       Date:  1997-05-27       Impact factor: 11.205

5.  A novel mRNA-decapping activity in HeLa cytoplasmic extracts is regulated by AU-rich elements.

Authors:  M Gao; C J Wilusz; S W Peltz; J Wilusz
Journal:  EMBO J       Date:  2001-03-01       Impact factor: 11.598

6.  The transcription factor associated Ccr4 and Caf1 proteins are components of the major cytoplasmic mRNA deadenylase in Saccharomyces cerevisiae.

Authors:  M Tucker; M A Valencia-Sanchez; R R Staples; J Chen; C L Denis; R Parker
Journal:  Cell       Date:  2001-02-09       Impact factor: 41.582

7.  An essential component of the decapping enzyme required for normal rates of mRNA turnover.

Authors:  C A Beelman; A Stevens; G Caponigro; T E LaGrandeur; L Hatfield; D M Fortner; R Parker
Journal:  Nature       Date:  1996-08-15       Impact factor: 49.962

8.  The eukaryotic mRNA decapping protein Dcp1 interacts physically and functionally with the eIF4F translation initiation complex.

Authors:  C Vilela; C Velasco; M Ptushkina; J E McCarthy
Journal:  EMBO J       Date:  2000-08-15       Impact factor: 11.598

9.  The exosome: a conserved eukaryotic RNA processing complex containing multiple 3'-->5' exoribonucleases.

Authors:  P Mitchell; E Petfalski; A Shevchenko; M Mann; D Tollervey
Journal:  Cell       Date:  1997-11-14       Impact factor: 41.582

10.  A mouse cytoplasmic exoribonuclease (mXRN1p) with preference for G4 tetraplex substrates.

Authors:  V I Bashkirov; H Scherthan; J A Solinger; J M Buerstedde; W D Heyer
Journal:  J Cell Biol       Date:  1997-02-24       Impact factor: 10.539

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  227 in total

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Authors:  Jun Xu; Nam-Hai Chua
Journal:  EMBO J       Date:  2012-03-09       Impact factor: 11.598

2.  DcpS can act in the 5'-3' mRNA decay pathway in addition to the 3'-5' pathway.

Authors:  Erwin van Dijk; Hervé Le Hir; Bertrand Séraphin
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-01       Impact factor: 11.205

3.  Decapping and decay of messenger RNA occur in cytoplasmic processing bodies.

Authors:  Ujwal Sheth; Roy Parker
Journal:  Science       Date:  2003-05-02       Impact factor: 47.728

4.  Crystal structure of Dcp1p and its functional implications in mRNA decapping.

Authors:  Meipei She; Carolyn J Decker; Kumar Sundramurthy; Yuying Liu; Nan Chen; Roy Parker; Haiwei Song
Journal:  Nat Struct Mol Biol       Date:  2004-02-01       Impact factor: 15.369

5.  An endonuclease activity similar to Xenopus PMR1 catalyzes the degradation of normal and nonsense-containing human beta-globin mRNA in erythroid cells.

Authors:  Kirsten A Bremer; Audrey Stevens; Daniel R Schoenberg
Journal:  RNA       Date:  2003-09       Impact factor: 4.942

6.  Functional analysis of mRNA scavenger decapping enzymes.

Authors:  Shin-Wu Liu; Xinfu Jiao; Hudan Liu; Meigang Gu; Christopher D Lima; Megerditch Kiledjian
Journal:  RNA       Date:  2004-07-23       Impact factor: 4.942

7.  Nematode m7GpppG and m3(2,2,7)GpppG decapping: activities in Ascaris embryos and characterization of C. elegans scavenger DcpS.

Authors:  Leah S Cohen; Claudette Mikhli; Cassandra Friedman; Marzena Jankowska-Anyszka; Janusz Stepinski; Edward Darzynkiewicz; Richard E Davis
Journal:  RNA       Date:  2004-10       Impact factor: 4.942

8.  The structural basis of Edc3- and Scd6-mediated activation of the Dcp1:Dcp2 mRNA decapping complex.

Authors:  Simon A Fromm; Vincent Truffault; Julia Kamenz; Joerg E Braun; Niklas A Hoffmann; Elisa Izaurralde; Remco Sprangers
Journal:  EMBO J       Date:  2011-11-15       Impact factor: 11.598

Review 9.  The Role of RNA in Biological Phase Separations.

Authors:  Marta M Fay; Paul J Anderson
Journal:  J Mol Biol       Date:  2018-05-10       Impact factor: 5.469

10.  Processing-body movement in Arabidopsis depends on an interaction between myosins and DECAPPING PROTEIN1.

Authors:  Alexandra Steffens; Benjamin Jaegle; Achim Tresch; Martin Hülskamp; Marc Jakoby
Journal:  Plant Physiol       Date:  2014-02-13       Impact factor: 8.340

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