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Literature DB >> 3131535

Archetypical features in tRNA families.

K Nicoghosian¹, M Bigras, D Sankoff, R Cedergren.

Abstract

A compilation of known tRNA, and tRNA gene sequences from archaebacteria, eubacteria, and eukaryotes permits the construction of tRNA cloverleafs which show conserved structural elements for each tRNA family. Positions conserved across the three kingdoms are thought to represent archetypical features of tRNAs which preceded the divergence of these kingdoms.

Mesh：

Substances：
RNA, Transfer

Year: 1987 PMID： 3131535 DOI： 10.1007/bf02101153

Source DB: PubMed Journal: J Mol Evol ISSN： 0022-2844 Impact factor: 2.395

19 in total

1. Ribosomal RNA phylogeny and the primary lines of evolutionary descent.

Authors: N R Pace; G J Olsen; C R Woese
Journal: Cell Date: 1986-05-09 Impact factor: 41.582

2. Enzymatic synthesis and some properties of a model primitive tRNA.

Authors: M Kinjo; T Hasegawa; K Nagano; H Ishikura; M Ishigami
Journal: J Mol Evol Date: 1986 Impact factor: 2.395

3. Phylogenetic structure of the prokaryotic domain: the primary kingdoms.

Authors: C R Woese; G E Fox
Journal: Proc Natl Acad Sci U S A Date: 1977-11 Impact factor: 11.205

4. Bizarre tRNAs inferred from DNA sequences of mitochondrial genomes of nematode worms.

Authors: D R Wolstenholme; J L Macfarlane; R Okimoto; D O Clary; J A Wahleithner
Journal: Proc Natl Acad Sci U S A Date: 1987-03 Impact factor: 11.205

5. Compilation of tRNA sequences.

Authors: M Sprinzl; J Moll; F Meissner; T Hartmann
Journal: Nucleic Acids Res Date: 1985 Impact factor: 16.971

6. The phylogeny of prokaryotes.

Authors: G E Fox; E Stackebrandt; R B Hespell; J Gibson; J Maniloff; T A Dyer; R S Wolfe; W E Balch; R S Tanner; L J Magrum; L B Zablen; R Blakemore; R Gupta; L Bonen; B J Lewis; D A Stahl; K R Luehrsen; K N Chen; C R Woese
Journal: Science Date: 1980-07-25 Impact factor: 47.728

7. The evolution of multi-isoacceptor tRNA families. Sequence of tRNA Leu CAA and tRNA Leu CAG from Anacystis nidulans.

Authors: B LaRue; N Newhouse; K Nicoghosian; R J Cedergren
Journal: J Biol Chem Date: 1981-02-25 Impact factor: 5.157

8. Translational efficiency of transfer RNA's: uses of an extended anticodon.

Authors: M Yarus
Journal: Science Date: 1982-11-12 Impact factor: 47.728

9. In vitro conversion of a methionine to a glutamine-acceptor tRNA.

Authors: L H Schulman; H Pelka
Journal: Biochemistry Date: 1985-12-03 Impact factor: 3.162

10. Escherichia coli formylmethionine tRNA: mutations in GGGCCC sequence conserved in anticodon stem of initiator tRNAs affect initiation of protein synthesis and conformation of anticodon loop.

Authors: B L Seong; U L RajBhandary
Journal: Proc Natl Acad Sci U S A Date: 1987-01 Impact factor: 11.205

6 in total

Archetypical features in tRNA families.

1. Ribosomal RNA phylogeny and the primary lines of evolutionary descent.

2. Enzymatic synthesis and some properties of a model primitive tRNA.

3. Phylogenetic structure of the prokaryotic domain: the primary kingdoms.

4. Bizarre tRNAs inferred from DNA sequences of mitochondrial genomes of nematode worms.

5. Compilation of tRNA sequences.

6. The phylogeny of prokaryotes.

7. The evolution of multi-isoacceptor tRNA families. Sequence of tRNA Leu CAA and tRNA Leu CAG from Anacystis nidulans.

8. Translational efficiency of transfer RNA's: uses of an extended anticodon.

9. In vitro conversion of a methionine to a glutamine-acceptor tRNA.

10. Escherichia coli formylmethionine tRNA: mutations in GGGCCC sequence conserved in anticodon stem of initiator tRNAs affect initiation of protein synthesis and conformation of anticodon loop.

1. Phylogenetic tree of tRNAs using a simple algorithm.

2. Highly repetitive tRNA(Pro)-tRNA(His) gene cluster from Photobacterium phosphoreum.

3. Rates of molecular evolution and the fraction of nucleotide positions free to vary.

4. Tandemly repeated tRNA pseudogenes in photobacterium.

5. Coding coenzyme handles: a hypothesis for the origin of the genetic code.

6. Novel Structural Variation and Evolutionary Characteristics of Chloroplast tRNA in Gossypium Plants.