Literature DB >> 31308617

Development of a Natural Language Processing Algorithm to Identify and Evaluate Transgender Patients in Electronic Health Record Systems.

Jesse M Ehrenfeld1, Keanan Gabriel Gottlieb2, Lauren Brittany Beach3, Shelby E Monahan4, Daniel Fabbri5.   

Abstract

Objective: To create a natural language processing (NLP) algorithm to identify transgender patients in electronic health records. Design: We developed an NLP algorithm to identify patients (keyword + billing codes). Patients were manually reviewed, and their health care services categorized by billing code. Setting: Vanderbilt University Medical Center. Participants: 234 adult and pediatric transgender patients. Main Outcome Measures: Number of transgender patients correctly identified and categorization of health services utilized.
Results: We identified 234 transgender patients of whom 50% had a diagnosed mental health condition, 14% were living with HIV, and 7% had diabetes. Largely driven by hormone use, nearly half of patients attended the Endocrinology/Diabetes/Metabolism clinic. Many patients also attended the Psychiatry, HIV, and/or Obstetrics/Gynecology clinics. The false positive rate of our algorithm was 3%. Conclusions: Our novel algorithm correctly identified transgender patients and provided important insights into health care utilization among this marginalized population.

Entities:  

Keywords:  Electronic Health Records; Natural Language Processing; Transgender; Utilization

Mesh:

Year:  2019        PMID: 31308617      PMCID: PMC6604788          DOI: 10.18865/ed.29.S2.441

Source DB:  PubMed          Journal:  Ethn Dis        ISSN: 1049-510X            Impact factor:   1.847


  17 in total

1.  Research electronic data capture (REDCap)--a metadata-driven methodology and workflow process for providing translational research informatics support.

Authors:  Paul A Harris; Robert Taylor; Robert Thielke; Jonathon Payne; Nathaniel Gonzalez; Jose G Conde
Journal:  J Biomed Inform       Date:  2008-09-30       Impact factor: 6.317

2.  Female-to-male transmasculine adult health: a mixed-methods community-based needs assessment.

Authors:  Sari L Reisner; Kristi E Gamarel; Emilia Dunham; Ruben Hopwood; Sel Hwahng
Journal:  J Am Psychiatr Nurses Assoc       Date:  2013-08-20       Impact factor: 2.385

3.  Guidelines for psychological practice with transgender and gender nonconforming people.

Authors: 
Journal:  Am Psychol       Date:  2015-12

4.  HIV Testing by Transgender Status at Centers for Disease Control and Prevention-Funded Sites in the United States, Puerto Rico, and US Virgin Islands, 2009-2011.

Authors:  Nancy Habarta; Guoshen Wang; Mesfin S Mulatu; Nili Larish
Journal:  Am J Public Health       Date:  2015-07-16       Impact factor: 9.308

5.  Electronic health records and transgender patients--practical recommendations for the collection of gender identity data.

Authors:  Madeline B Deutsch; David Buchholz
Journal:  J Gen Intern Med       Date:  2015-01-06       Impact factor: 5.128

6.  Access to care for transgender veterans in the Veterans Health Administration: 2006-2013.

Authors:  Michael R Kauth; Jillian C Shipherd; Jan Lindsay; John R Blosnich; George R Brown; Kenneth T Jones
Journal:  Am J Public Health       Date:  2014-09       Impact factor: 9.308

7.  Adolescent gender-related abuse, androphilia, and HIV risk among transfeminine people of color in New York City.

Authors:  Sel J Hwahng; Larry Nuttbrock
Journal:  J Homosex       Date:  2014

8.  The Opportunity for Medical Systems to Reduce Health Disparities Among Lesbian, Gay, Bisexual, Transgender and Intersex Patients.

Authors:  Cameron Donald; Jesse M Ehrenfeld
Journal:  J Med Syst       Date:  2015-09-28       Impact factor: 4.460

Review 9.  Estimating HIV prevalence and risk behaviors of transgender persons in the United States: a systematic review.

Authors:  Jeffrey H Herbst; Elizabeth D Jacobs; Teresa J Finlayson; Vel S McKleroy; Mary Spink Neumann; Nicole Crepaz
Journal:  AIDS Behav       Date:  2007-08-13

10.  Racial/ethnic disparities in history of incarceration, experiences of victimization, and associated health indicators among transgender women in the U.S.

Authors:  Sari L Reisner; Zinzi Bailey; Jae Sevelius
Journal:  Women Health       Date:  2014
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  9 in total

1.  A Single-Center Study of Adherence to Breast Cancer Screening Mammography Guidelines by Transgender and Non-Binary Patients.

Authors:  Natalie Luehmann; Mona Ascha; Emily Chwa; Paige Hackenberger; Kareem Termanini; Christopher Benning; Danny Sama; Dylan Felt; Lauren B Beach; Dipti Gupta; Swati A Kulkarni; Sumanas W Jordan
Journal:  Ann Surg Oncol       Date:  2021-10-26       Impact factor: 5.344

2.  Change in Gender on Record and Transgender Adults' Mental or Behavioral Health.

Authors:  Kimberly Yee; Bonnie K Lind; Jae Downing
Journal:  Am J Prev Med       Date:  2021-12-16       Impact factor: 6.604

Review 3.  A scoping review of ethics considerations in clinical natural language processing.

Authors:  Oliver J Bear Don't Walk; Harry Reyes Nieva; Sandra Soo-Jin Lee; Noémie Elhadad
Journal:  JAMIA Open       Date:  2022-05-26

4.  Using Administrative Data to Predict Suicide After Psychiatric Hospitalization in the Veterans Health Administration System.

Authors:  Ronald C Kessler; Mark S Bauer; Todd M Bishop; Olga V Demler; Steven K Dobscha; Sarah M Gildea; Joseph L Goulet; Elizabeth Karras; Julie Kreyenbuhl; Sara J Landes; Howard Liu; Alex R Luedtke; Patrick Mair; William H B McAuliffe; Matthew Nock; Maria Petukhova; Wilfred R Pigeon; Nancy A Sampson; Jordan W Smoller; Lauren M Weinstock; Robert M Bossarte
Journal:  Front Psychiatry       Date:  2020-05-06       Impact factor: 4.157

5.  Development of a computable phenotype to identify a transgender sample for health research purposes: a feasibility study in a large linked provincial healthcare administrative cohort in British Columbia, Canada.

Authors:  Ashleigh J Rich; Tonia Poteat; Mieke Koehoorn; Jenny Li; Monica Ye; Paul Sereda; Travis Salway; Robert Hogg
Journal:  BMJ Open       Date:  2021-03-25       Impact factor: 2.692

Review 6.  Transgender Individuals and Digital Health.

Authors:  Asa E Radix; Keosha Bond; Pedro B Carneiro; Arjee Restar
Journal:  Curr HIV/AIDS Rep       Date:  2022-09-22       Impact factor: 5.495

7.  Implementation of Gender Identity and Assigned Sex at Birth Data Collection in Electronic Health Records: Where Are We Now?

Authors:  Hale M Thompson; Clair A Kronk; Ketzel Feasley; Paul Pachwicewicz; Niranjan S Karnik
Journal:  Int J Environ Res Public Health       Date:  2021-06-19       Impact factor: 3.390

Review 8.  A rapid review of gender, sex, and sexual orientation documentation in electronic health records.

Authors:  Francis Lau; Marcy Antonio; Kelly Davison; Roz Queen; Aaron Devor
Journal:  J Am Med Inform Assoc       Date:  2020-11-01       Impact factor: 4.497

9.  Algorithm to identify transgender and gender nonbinary individuals among people living with HIV performs differently by age and ethnicity.

Authors:  Jules Chyten-Brennan; Viraj V Patel; Mindy S Ginsberg; David B Hanna
Journal:  Ann Epidemiol       Date:  2020-10-01       Impact factor: 3.797

  9 in total

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