Literature DB >> 31300751

The potential of genomics for restoring ecosystems and biodiversity.

Martin F Breed1, Peter A Harrison2, Colette Blyth3, Margaret Byrne4, Virginie Gaget3, Nicholas J C Gellie3, Scott V C Groom5, Riley Hodgson3, Jacob G Mills3, Thomas A A Prowse3,6, Dorothy A Steane2, Jakki J Mohr7.   

Abstract

Billions of hectares of natural ecosystems have been degraded through human actions. The global community has agreed on targets to halt and reverse these declines, and the restoration sector faces the important but arduous task of implementing programmes to meet these objectives. Existing and emerging genomics tools offer the potential to improve the odds of achieving these targets. These tools include population genomics that can improve seed sourcing, meta-omics that can improve assessment and monitoring of restoration outcomes, and genome editing that can generate novel genotypes for restoring challenging environments. We identify barriers to adopting these tools in a restoration context and emphasize that regulatory and ethical frameworks are required to guide their use.

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Year:  2019        PMID: 31300751     DOI: 10.1038/s41576-019-0152-0

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  92 in total

Review 1.  The power and promise of population genomics: from genotyping to genome typing.

Authors:  Gordon Luikart; Phillip R England; David Tallmon; Steve Jordan; Pierre Taberlet
Journal:  Nat Rev Genet       Date:  2003-12       Impact factor: 53.242

2.  Harnessing genomics for delineating conservation units.

Authors:  W Chris Funk; John K McKay; Paul A Hohenlohe; Fred W Allendorf
Journal:  Trends Ecol Evol       Date:  2012-06-21       Impact factor: 17.712

3.  Conservation. Committing to ecological restoration.

Authors:  Katharine Suding; Eric Higgs; Margaret Palmer; J Baird Callicott; Christopher B Anderson; Matthew Baker; John J Gutrich; Kelly L Hondula; Matthew C LaFevor; Brendon M H Larson; Alan Randall; J B Ruhl; Katrina Z S Schwartz
Journal:  Science       Date:  2015-05-08       Impact factor: 47.728

Review 4.  Genome sequencing and population genomics in non-model organisms.

Authors:  Hans Ellegren
Journal:  Trends Ecol Evol       Date:  2013-10-17       Impact factor: 17.712

5.  Genomics and the challenging translation into conservation practice.

Authors:  Aaron B A Shafer; Jochen B W Wolf; Paulo C Alves; Linnea Bergström; Michael W Bruford; Ioana Brännström; Guy Colling; Love Dalén; Luc De Meester; Robert Ekblom; Katie D Fawcett; Simone Fior; Mehrdad Hajibabaei; Jason A Hill; A Rus Hoezel; Jacob Höglund; Evelyn L Jensen; Johannes Krause; Torsten N Kristensen; Michael Krützen; John K McKay; Anita J Norman; Rob Ogden; E Martin Österling; N Joop Ouborg; John Piccolo; Danijela Popović; Craig R Primmer; Floyd A Reed; Marie Roumet; Jordi Salmona; Tamara Schenekar; Michael K Schwartz; Gernot Segelbacher; Helen Senn; Jens Thaulow; Mia Valtonen; Andrew Veale; Philippine Vergeer; Nagarjun Vijay; Carles Vilà; Matthias Weissensteiner; Lovisa Wennerström; Christopher W Wheat; Piotr Zieliński
Journal:  Trends Ecol Evol       Date:  2014-12-17       Impact factor: 17.712

6.  Ethical seed sourcing is a key issue in meeting global restoration targets.

Authors:  Paul G Nevill; Adam T Cross; Kingsley W Dixon
Journal:  Curr Biol       Date:  2018-12-17       Impact factor: 10.834

7.  Conservation. Taking the measure of change.

Authors:  Ben Collen; Emily Nicholson
Journal:  Science       Date:  2014-10-02       Impact factor: 47.728

8.  How economics can further the success of ecological restoration.

Authors:  Md Sayed Iftekhar; Maksym Polyakov; Dean Ansell; Fiona Gibson; Geoffrey M Kay
Journal:  Conserv Biol       Date:  2016-09-29       Impact factor: 6.560

9.  Accelerated modern human-induced species losses: Entering the sixth mass extinction.

Authors:  Gerardo Ceballos; Paul R Ehrlich; Anthony D Barnosky; Andrés García; Robert M Pringle; Todd M Palmer
Journal:  Sci Adv       Date:  2015-06-19       Impact factor: 14.136

10.  A global meta-analysis on the ecological drivers of forest restoration success.

Authors:  Renato Crouzeilles; Michael Curran; Mariana S Ferreira; David B Lindenmayer; Carlos E V Grelle; José M Rey Benayas
Journal:  Nat Commun       Date:  2016-05-19       Impact factor: 14.919

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  23 in total

1.  Benthic-based contributions to climate change mitigation and adaptation.

Authors:  Martin Solan; Elena M Bennett; Peter J Mumby; Julian Leyland; Jasmin A Godbold
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-01-27       Impact factor: 6.237

2.  Is the genomics 'cart' before the restoration ecology 'horse'? Insights from qualitative interviews and trends from the literature.

Authors:  Jakki J Mohr; Peter A Harrison; Jessica Stanhope; Martin F Breed
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2022-06-27       Impact factor: 6.671

3.  Assessing ex situ genetic and ecogeographic conservation in a threatened but widespread oak after range-wide collecting effort.

Authors:  Bethany A Zumwalde; Bailie Fredlock; Emily Beckman Bruns; Drew Duckett; Ross A McCauley; Emma Suzuki Spence; Sean Hoban
Journal:  Evol Appl       Date:  2022-05-31       Impact factor: 4.929

4.  Evolutionary history and genetic connectivity across highly fragmented populations of an endangered daisy.

Authors:  Yael S Rodger; Alexandra Pavlova; Steve Sinclair; Melinda Pickup; Paul Sunnucks
Journal:  Heredity (Edinb)       Date:  2021-02-19       Impact factor: 3.821

5.  Pilot RNA-seq data from 24 species of vascular plants at Harvard Forest.

Authors:  Hannah E Marx; Stacy A Jorgensen; Eldridge Wisely; Zheng Li; Katrina M Dlugosch; Michael S Barker
Journal:  Appl Plant Sci       Date:  2021-02-14       Impact factor: 1.936

6.  Extremely low nucleotide diversity among thirty-six new chloroplast genome sequences from Aldama (Heliantheae, Asteraceae) and comparative chloroplast genomics analyses with closely related genera.

Authors:  Benoit Loeuille; Verônica Thode; Carolina Siniscalchi; Sonia Andrade; Magdalena Rossi; José Rubens Pirani
Journal:  PeerJ       Date:  2021-02-24       Impact factor: 2.984

7.  Association of putatively adaptive genetic variation with climatic variables differs between a parasite and its host.

Authors:  Sheree J Walters; Todd P Robinson; Margaret Byrne; Grant W Wardell-Johnson; Paul Nevill
Journal:  Evol Appl       Date:  2021-04-08       Impact factor: 5.183

8.  Spaceship Earth Revisited: The Co-Benefits of Overcoming Biological Extinction of Experience at the Level of Person, Place and Planet.

Authors:  Susan L Prescott; Jeffrey S Bland
Journal:  Int J Environ Res Public Health       Date:  2020-02-21       Impact factor: 3.390

Review 9.  Population genomics for wildlife conservation and management.

Authors:  Paul A Hohenlohe; W Chris Funk; Om P Rajora
Journal:  Mol Ecol       Date:  2020-11-18       Impact factor: 6.185

10.  Charting a course for genetic diversity in the UN Decade of Ocean Science.

Authors:  Alex Innes Thomson; Frederick I Archer; Melinda A Coleman; Gonzalo Gajardo; William P Goodall-Copestake; Sean Hoban; Linda Laikre; Adam D Miller; David O'Brien; Sílvia Pérez-Espona; Gernot Segelbacher; Ester A Serrão; Kjersti Sjøtun; Michele S Stanley
Journal:  Evol Appl       Date:  2021-05-04       Impact factor: 5.183

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