| Literature DB >> 31253980 |
Hai Fang1, Hans De Wolf2, Bogdan Knezevic1, Katie L Burnham1, Julie Osgood1, Anna Sanniti1, Alicia Lledó Lara1, Silva Kasela3, Stephane De Cesco4, Jörg K Wegner2, Lahiru Handunnetthi1, Fiona E McCann5, Liye Chen6, Takuya Sekine6, Paul E Brennan4,7, Brian D Marsden5,7, David Damerell7, Chris A O'Callaghan1,8, Chas Bountra7, Paul Bowness6,8, Yvonne Sundström9, Lili Milani3, Louise Berg9, Hinrich W Göhlmann2, Pieter J Peeters2, Benjamin P Fairfax10, Michael Sundström9, Julian C Knight11,12.
Abstract
Most candidate drugs currently fail later-stage clinical trials, largely due to poor prediction of efficacy on early target selection1. Drug targets with genetic support are more likely to be therapeutically valid2,3, but the translational use of genome-scale data such as from genome-wide association studies for drug target discovery in complex diseases remains challenging4-6. Here, we show that integration of functional genomic and immune-related annotations, together with knowledge of network connectivity, maximizes the informativeness of genetics for target validation, defining the target prioritization landscape for 30 immune traits at the gene and pathway level. We demonstrate how our genetics-led drug target prioritization approach (the priority index) successfully identifies current therapeutics, predicts activity in high-throughput cellular screens (including L1000, CRISPR, mutagenesis and patient-derived cell assays), enables prioritization of under-explored targets and allows for determination of target-level trait relationships. The priority index is an open-access, scalable system accelerating early-stage drug target selection for immune-mediated disease.Entities:
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Year: 2019 PMID: 31253980 PMCID: PMC7124888 DOI: 10.1038/s41588-019-0456-1
Source DB: PubMed Journal: Nat Genet ISSN: 1061-4036 Impact factor: 38.330