| Literature DB >> 34013350 |
Thomas Gaudelet1, Ben Day1,2, Arian R Jamasb1,2,3, Jyothish Soman1, Cristian Regep1, Gertrude Liu1, Jeremy B R Hayter1, Richard Vickers1, Charles Roberts1,4, Jian Tang5,6, David Roblin1,4,7, Tom L Blundell3, Michael M Bronstein1,8,9, Jake P Taylor-King1,4.
Abstract
Graph machine learning (GML) is receiving growing interest within the pharmaceutical and biotechnology industries for its ability to model biomolecular structures, the functional relationships between them, and integrate multi-omic datasets - amongst other data types. Herein, we present a multidisciplinary academic-industrial review of the topic within the context of drug discovery and development. After introducing key terms and modelling approaches, we move chronologically through the drug development pipeline to identify and summarize work incorporating: target identification, design of small molecules and biologics, and drug repurposing. Whilst the field is still emerging, key milestones including repurposed drugs entering in vivo studies, suggest GML will become a modelling framework of choice within biomedical machine learning.Entities:
Keywords: drug development; drug discovery; graph machine learning
Mesh:
Year: 2021 PMID: 34013350 PMCID: PMC8574649 DOI: 10.1093/bib/bbab159
Source DB: PubMed Journal: Brief Bioinform ISSN: 1467-5463 Impact factor: 11.622