Literature DB >> 3120179

Accurate 5' splice-site selection in mouse kappa immunoglobulin light chain premessenger RNAs is not cell-type-specific.

D H Kedes1, J A Steitz.   

Abstract

In mature mouse B lymphocytes, immunoglobulin kappa light chain transcripts contain an intervening sequence separating the recombined variable (V) plus joining (J) exon from the distant constant (C) exon. After V-J recombination, this intervening sequence can include as many as three unused but very similar J-region 5' splice sites. Each of these sites is potentially functional if the gene is appropriately recombined. It is unclear how the splicing machinery distinguishes among these 5' splice sites, always choosing the most upstream site. We used synthetic transcripts of kappa gene sequences containing J3 and J4 in both the germ-line and the recombined configurations to study the pattern of 5' splice-site selection in vitro. We find that both HeLa cell and lymphocyte nuclear extracts fail to discriminate between the J3- and J4-region 5' splice sites. In contrast, after transfection into HeLa cells, similar kappa light chain transcripts are spliced correctly at the most upstream 5' splice site--that which is used in kappa-producing cells. We conclude that accurate 5' splice-site selection in the mouse kappa light chain is neither cell-type- nor species-specific. Potential mechanisms for this controlling step in gene expression are discussed.

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Year:  1987        PMID: 3120179      PMCID: PMC299449          DOI: 10.1073/pnas.84.22.7928

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  32 in total

1.  Sizing and mapping of early adenovirus mRNAs by gel electrophoresis of S1 endonuclease-digested hybrids.

Authors:  A J Berk; P A Sharp
Journal:  Cell       Date:  1977-11       Impact factor: 41.582

2.  Regulation of differential processing of mouse immunoglobulin mu heavy-chain mRNA.

Authors:  N Tsurushita; N M Avdalovic; L J Korn
Journal:  Nucleic Acids Res       Date:  1987-06-11       Impact factor: 16.971

3.  Alternatives for splicing: recognizing the ends of introns.

Authors:  B Lewin
Journal:  Cell       Date:  1980-11       Impact factor: 41.582

4.  In vitro splicing of kappa immunoglobulin precursor mRNA.

Authors:  D E Lowery; B G Van Ness
Journal:  Mol Cell Biol       Date:  1987-04       Impact factor: 4.272

5.  Specific transcription and RNA splicing defects in five cloned beta-thalassaemia genes.

Authors:  R Treisman; S H Orkin; T Maniatis
Journal:  Nature       Date:  1983-04-14       Impact factor: 49.962

6.  Unusual splice sites revealed by mutagenic inactivation of an authentic splice site of the rabbit beta-globin gene.

Authors:  B Wieringa; F Meyer; J Reiser; C Weissmann
Journal:  Nature       Date:  1983-01-06       Impact factor: 49.962

Review 7.  Somatic generation of antibody diversity.

Authors:  S Tonegawa
Journal:  Nature       Date:  1983-04-14       Impact factor: 49.962

8.  Speculations on RNA splicing.

Authors:  P A Sharp
Journal:  Cell       Date:  1981-03       Impact factor: 41.582

9.  Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei.

Authors:  J D Dignam; R M Lebovitz; R G Roeder
Journal:  Nucleic Acids Res       Date:  1983-03-11       Impact factor: 16.971

10.  RNA splice site selection: evidence for a 5' leads to 3' scanning model.

Authors:  K M Lang; R A Spritz
Journal:  Science       Date:  1983-06-24       Impact factor: 47.728

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  11 in total

1.  Proteolysis of splicing factors during rat and monkey cell fractionation.

Authors:  H La Branche; D Frappier; B Chabot
Journal:  Nucleic Acids Res       Date:  1991-08-25       Impact factor: 16.971

2.  In vitro splicing of fibronectin pre-mRNAs.

Authors:  P A Norton; R O Hynes
Journal:  Nucleic Acids Res       Date:  1990-07-25       Impact factor: 16.971

3.  A novel germ-line JK transcript starting immediately upstream of JK1.

Authors:  L Leclercq; P Butkeraitis; M Reth
Journal:  Nucleic Acids Res       Date:  1989-09-12       Impact factor: 16.971

4.  Comparison of in vitro and in vivo splice site selection in kappa-immunoglobulin precursor mRNA.

Authors:  D E Lowery; B G Van Ness
Journal:  Mol Cell Biol       Date:  1988-06       Impact factor: 4.272

5.  Model for tissue specific Calcitonin/CGRP-I RNA processing from in vitro experiments.

Authors:  R A Bovenberg; G J Adema; H S Jansz; P D Baas
Journal:  Nucleic Acids Res       Date:  1988-08-25       Impact factor: 16.971

6.  Cis requirements for alternative splicing of the cardiac troponin T pre-mRNA.

Authors:  T A Cooper; M H Cardone; C P Ordahl
Journal:  Nucleic Acids Res       Date:  1988-09-12       Impact factor: 16.971

7.  Direct selection for mutations affecting specific splice sites in a hamster dihydrofolate reductase minigene.

Authors:  I T Chen; L A Chasin
Journal:  Mol Cell Biol       Date:  1993-01       Impact factor: 4.272

8.  Myosin light-chain 1/3 gene alternative splicing: cis regulation is based upon a hierarchical compatibility between splice sites.

Authors:  M E Gallego; B Nadal-Ginard
Journal:  Mol Cell Biol       Date:  1990-05       Impact factor: 4.272

9.  Nucleotide substitutions within the cardiac troponin T alternative exon disrupt pre-mRNA alternative splicing.

Authors:  T A Cooper; C P Ordahl
Journal:  Nucleic Acids Res       Date:  1989-10-11       Impact factor: 16.971

10.  Heat shock but not other stress inducers leads to the disruption of a sub-set of snRNPs and inhibition of in vitro splicing in HeLa cells.

Authors:  U Bond
Journal:  EMBO J       Date:  1988-11       Impact factor: 11.598

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