Allison H Squires1, Abhijit A Lavania1,2, Peter D Dahlberg1, W E Moerner1,2. 1. Department of Chemistry , Stanford University , Stanford , California 94305 , United States. 2. Department of Applied Physics , Stanford University , Stanford , California 94305 , United States.
Abstract
Anti-Brownian traps confine single particles in free solution by closed-loop feedback forces that directly counteract Brownian motion. Extended-duration measurements on trapped objects allow detailed characterization of photophysical and transport properties as well as observation of infrequent or rare dynamics. However, this approach has been generally limited to particles that can be tracked by fluorescence emission. Here we present the Interferometric Scattering Anti-Brownian ELectrokinetic (ISABEL) trap, which uses interferometric scattering rather than fluorescence to monitor particle position. By decoupling the ability to track (and therefore trap) a particle from collection of its spectroscopic data, the ISABEL trap enables confinement and extended study of single particles that do not fluoresce, only weakly fluoresce, or exhibit intermittent fluorescence or photobleaching. This new technique significantly expands the range of nanoscale objects that may be investigated at the single-particle level in free solution.
Anti-Brownian traps confine single particles in free solution by closed-loop feedback forces that directly counteract Brownian motion. Extended-duration measurements on trapped objects allow detailed characterization of photophysical and transport properties as well as observation of infrequent or rare dynamics. However, this approach has been generally limited to particles that can be tracked by fluorescence emission. Here we present the Interferometric Scattering Anti-Brownian ELectrokinetic (ISABEL) trap, which uses interferometric scattering rather than fluorescence to monitor particle position. By decoupling the ability to track (and therefore trap) a particle from collection of its spectroscopic data, the ISABEL trap enables confinement and extended study of single particles that do not fluoresce, only weakly fluoresce, or exhibit intermittent fluorescence or photobleaching. This new technique significantly expands the range of nanoscale objects that may be investigated at the single-particle level in free solution.
Entities:
Keywords:
ABEL trap; Interferometric scattering; anti-Brownian electrokinetic trap; single-molecule; single-nanoparticle
The consequence of Brownian
motion in solution-phase single-molecule fluorescence spectroscopy
experiments is that nanoscale objects quickly diffuse out of focus
or through a confocal observation volume, resulting in brief bursts
of signal that can reveal population-wide heterogeneity or submillisecond
dynamics.[1−5] In order to access longer time scales or record infrequent events,
it is necessary to employ methods that prolong observation of individual
particles by overcoming diffusion. One such strategy is to actively
maintain the position of the particle within an observation volume
in free solution using closed-loop feedback, either by quickly following
the trajectory of the particle with a positioning stage[6−10] or by applying forces that counteract the effects of Brownian motion.[11] The latter class of approaches, collectively
known as anti-Brownian traps,[12−14] can circumvent the potential
risks of perturbation due to interactions with or alterations of the
local nanoenvironment that may accompany immobilization of particles
by tethers, surface attachment, or encapsulation.[15−21]All implementations of anti-Brownian traps can be distilled
to
two essential aspects of the closed-loop feedback: first, real-time
tracking provides the location of a particle relative to the target
position and may be determined using fluorescence[6,11] or
bright- or dark-field imaging[8,22,23] in combination with either camera-based tracking[23−25] or timed movement
of the excitation beam and one or more point detectors.[6,9,26−28] Second, a feedback
force must be quickly applied to move the particle back toward the
target, which may be implemented using electric fields to induce electrophoresis
or electroosmosis,[28−30] thermal gradients to induce thermophoresis,[31] optical forces,[32] or differential pressure to induce hydrodynamic flow.[33] These steps must be implemented quickly enough
to overcome the diffusive motion of the particle, and significant
recent progress has been made toward optimizing this control loop
to enable trapping of individual small organic fluorophores.[28,34] Trap implementations that utilize either intrinsic or label-based
fluorescence to track emissive particles have been employed to characterize
time-varying photophysical states,[35−40] molecular dynamics and kinetics,[41−47] and more.[48−50] However, the trapping duration and associated data
collection in anti-Brownian traps are typically limited by photobleaching
or blinking because dark particles cannot be tracked and are quickly
lost. Bechhoefer and co-workers successfully demonstrated trapping
of nonfluorescent particles using a dark-field signal,[23] but the unfavorable scaling of scattering intensity
with particle size limits this approach to relatively large nanoscale
objects (>100 nm) with large scattering cross sections.We
introduce here the Interferometric Scattering Anti-Brownian
ELectrokinetic (ISABEL) trap, a new anti-Brownian device to track
and trap small, nonfluorescent nanoscale objects by using the interference
signal between scattered light from the particle and a constant reference
field to rapidly estimate a nanoparticle’s position. Closed-loop
electrokinetic feedback can then be used to control the position of
the particle. We demonstrate trapping of gold, polystyrene, and semiconductor
nanoparticles as small as 15–20 nm in diameter and show that
the ISABEL trap completely decouples the ability to trap a nanoparticle
from measurements related to its fluorescence. Because the interferometric
scattering signal scales favorably with particle size relative to
scattering alone, the ISABEL trap significantly broadens the range
of trappable objects to include small nanoparticles with weak, highly
variable, or even no fluorescent signal.The ISABEL trap is
conceptually similar to its anti-Brownian electrokinetic
(ABEL) trap predecessors,[12] with the key
modification that the particle is tracked interferometrically. Recently,
interferometric scattering microscopy techniques that utilize a coherent
reference (or local oscillator) field, Er, to homodyne-detect a scattered electric field, Es, have been developed for detection and tracking of single
weak scatterers.[51−53] The favorable scaling of an interferometric scattering
signal (commonly abbreviated as “iSCAT”[54]) enables detection and high-speed tracking of nanoscale
particles[55−57] and has been used to directly detect biological molecules,
including viruses,[54] cell secretions,[58] and microtubules,[59] and to weigh single proteins.[60] The recent
progress in this field motivated us to develop interferometric scattering
into a useful signal for active-feedback nanoparticle trapping.In the ISABEL trap, particles of interest are diluted and loaded
into a quartz microfluidic cell (Figure a,b), across the trapping region of which
a low-coherence-length laser is scanned in a 32-point grid pattern
to create the incident excitation field, Ei, which covers a roughly 2 μm × 2 μm square trapping
region (Figure b).
The reflected light from the quartz–water interface forms a
reference field, Er, which along with
the scattered field, Es, is collected
by a high-NA objective lens and detected on a photodiode, as shown
in Figure a,c. The
reflected and scattered fields are both separated from the excitation
beam using a linear polarizing beamsplitter in combination with a
quarter-wave plate. The beam scanning in x and y is produced by a pair of acousto-optic deflectors (AODs)
controlled by a field-programmable gate array (FPGA), so that the
beam position is precisely known as a function of time. Thus, the
signal detected on the photodiode over the course of the beam scan
can be directly mapped to the scan grid. In addition to detection
of scattered and reflected light, fluorescence signals may be simultaneously
acquired in a separate detection channel on an avalanche photodiode.
Figure 1
ISABEL
trap schematic. (a) A focused incident beam (Ei) with low coherence length illuminates a particle
in a shallow microfluidic cell (700 nm height), and the backscattered
light (Es) is collected by a high-NA objective.
A coherent back-reflection from the quartz–water interface
is also collected (Er). (b) Top view of
a microfluidic cell showing the scan pattern of the excitation beam,
controlled via a field-programmable gate array (FPGA) and two acousto-optic
deflectors (AODs), at the center of two crossed microfluidic channels.
The trap center, marked by an “×”, can be programmatically
placed anywhere on this grid. (c) Schematic of optical excitation
and detection paths for the ISABEL trap. Linearly polarized excitation
light passes through a quarter-wave plate, so that backscattered and
reflected light can be redirected with a polarizing beamsplitter (PBS)
and detected at a fast photodiode. Emitted fluorescence can be collected
in a separate emission channel. Closed-loop feedback voltages are
calculated by the FPGA and applied to the solution using platinum
electrodes.
ISABEL
trap schematic. (a) A focused incident beam (Ei) with low coherence length illuminates a particle
in a shallow microfluidic cell (700 nm height), and the backscattered
light (Es) is collected by a high-NA objective.
A coherent back-reflection from the quartz–water interface
is also collected (Er). (b) Top view of
a microfluidic cell showing the scan pattern of the excitation beam,
controlled via a field-programmable gate array (FPGA) and two acousto-optic
deflectors (AODs), at the center of two crossed microfluidic channels.
The trap center, marked by an “×”, can be programmatically
placed anywhere on this grid. (c) Schematic of optical excitation
and detection paths for the ISABEL trap. Linearly polarized excitation
light passes through a quarter-wave plate, so that backscattered and
reflected light can be redirected with a polarizing beamsplitter (PBS)
and detected at a fast photodiode. Emitted fluorescence can be collected
in a separate emission channel. Closed-loop feedback voltages are
calculated by the FPGA and applied to the solution using platinum
electrodes.In order to track the
particle and thereby determine the appropriate
feedback forces necessary to trap it, the particle position is estimated
after each complete beam scan, and the detected signal is organized
into a single 32-point frame (typical frame rates 1–10 kHz).
To locate the particle, the photodiode signal at each scan position
is first recorded, as shown in Figure a. The expected intensity incident upon the detector, Idet, depends upon the amplitudes of the reflected
and scattered fields Er and Es as well as their relative phase, θ:Er and Es are generated by
interactions of the incident
field, Ei, with an interface and the scattering
particle, respectively. Er is determined
by the reflectivity of the interface, r, so that Er = rEi. Typical values for r2 are on
the order of 1%; glass–air and glass–water interfaces
reflect 4% and 0.4% of normally incident light, respectively.[61]Es is determined
by the complex scattering coefficient, s, so that Es = sEi. In the Rayleigh limit, s is proportional
to the complex polarizability of the particle, which is described
by the particle’s volume, V, and the complex
bulk polarizability of the material relative to the surrounding medium,
α(λ), where λ is the wavelength of the incoming
light: s ∝ α(λ)·V.[62] The most commonly reported metric
for scattering objects is the scattering cross section, σscat ∝ |s|2, which includes
all dependencies on particle size and particle and medium bulk polarizability.
Figure 2
Image
reconstruction and trapping algorithm. (a) The photodiode
voltage contains the information about interference between the scattered
and reflected beams, and the signal is digitized at the times P shown, after multiple photodiode
time constants. (b) A representation of the signals recorded from
the various scanning beam positions (pixels). The background signal
with no bead in the trap is also shown. (c) Flat-fielded fractional
contrast signals after removal of background for two complete frames.
(d) Illustration of the trapping algorithm. After each 600 μs
frame, the largest absolute value is used to define the force direction
(red arrow) needed to move the particle to the trap center (white
×).
Image
reconstruction and trapping algorithm. (a) The photodiode
voltage contains the information about interference between the scattered
and reflected beams, and the signal is digitized at the times P shown, after multiple photodiode
time constants. (b) A representation of the signals recorded from
the various scanning beam positions (pixels). The background signal
with no bead in the trap is also shown. (c) Flat-fielded fractional
contrast signals after removal of background for two complete frames.
(d) Illustration of the trapping algorithm. After each 600 μs
frame, the largest absolute value is used to define the force direction
(red arrow) needed to move the particle to the trap center (white
×).It is important to note that Ei (which
varies spatially in both magnitude and phase because of the focused
excitation beam) generates Es only at
the position of the scattering particle, while the reflected field
is generated across the entire beam profile. Considering for the moment
an on-axis particle position, where the magnitude of sEi would be greatest, eq can be rewritten asOur large-area point detector measures the integrated value
of
the intensity image Idet, denoted Sdet, for each grid position, and after each
complete scan these values are used to reconstruct a single ISABEL
image frame, as shown in Figure b, where each pixel is assigned the recorded raw signal
value from the corresponding scan location. It is clear from eq and the definition of s above that the dark-field term, |Ei|2|s|2, will scale
with the square of the particle volume, or with the sixth power of
the diameter (i.e., d6), and therefore
will become negligible in comparison to the homodyne term, 2|Ei|2r|s| cos θ, for small particles. The reference term, |Ei|2r2, is generated from the quartz–water interface of the microfluidic
cell and usually dominates the measurement. This reflection should
remain constant over time, so in order to isolate the desired homodyne
term in eq , a background
frame containing only the reflection, Sbkg, is subtracted and used for normalization. For each point in the
ISABEL scan, the absolute fractional contrast, Cf, is defined asThe same frames depicted in Figure b are shown in Figure c as fractional contrast before the absolute
value
is taken, and they demonstrate that the homodyne term may take either
positive or negative values at different points in the scan. The homodyne
term can also change sign as a result of motion of the particle and
subsequent change in the relative phase θ. Therefore, to overcome
these issues and reliably identify the scan point that deviates most
from the background, the absolute value of the fractional contrast
is calculated by the FPGA (eq and Figure d), and the location of max(Cf) is
used as the particle position in that frame. We define the value of
the absolute fractional contrast for each frame as the value at that
pixel. It is worth noting that the residual Brownian motion of the
nanoparticle (even in the axial direction) causes various relative
phases to be sampled during each scan position. In spite of this,
the absolute fractional contrast in terms of s and r still scales approximately as ||s|/r|.After the estimated particle position is determined,
the displacement
vector from the particle to the trap center is calculated, and appropriate
feedback voltages are immediately applied to the electrodes in the
microfluidic cell by the FPGA for the duration of one frame. As in
the previous ABEL trap designs, the resulting applied field is locally
uniform with no gradient. The resulting drift force directs the particle
toward the pixel marked with a white × in Figure d, and the amplitude of the
applied field is scaled linearly with the distance between the estimated
pixel position and the target pixel position. If the estimated position
is the same as the target, no voltages are applied. Depending upon
surface treatment and zeta potentials, the applied voltages generate
either an electrophoretic force (dependent upon the particle charge)
or an electroosmotic flow (no requirement on particle charge) that
biases the random diffusion of the scatterer in solution toward the
target in the middle of the trapping region.To test the ISABEL
trap, we trapped a series of gold nanoparticles
of various sizes <100 nm in diameter. Typical results for trapping
of nominally 40 nm diameter beads can be seen in Figure . For each trapped particle,
the key variables are the absolute fractional interferometric scattering
contrast and the position of the pixel with the highest value of contrast,
defined by x, y, and the radius R from the software-defined trap center (Figure a). In the gray-shaded regions,
feedback is off and the trap is typically empty, except for occasional
diffusion of a bead through the trap, as seen here at ∼34.3
s. During these intervals, the values of x, y, and R are generally random because the
algorithm is showing the position of the maximum interferometric scattering
signal from noise, which could occur anywhere within the frame. A
background frame is typically collected and saved under operator control
during this time, for example, at the time ∼32.5 s in Figure a. An xy plot of the absolute fractional contrast in this background frame
is shown in the upper panel of Figure b. When feedback is on, a bead is quickly trapped after
it diffuses into the trapping region. An example of the spatial distribution
of the signal (the “image” of the particle in the trap)
for a trapped bead is shown in the lower panel of Figure b. It is important to note
that for a bead of this size (∼40 nm diameter), the trapping
is typically so robust that the feedback must be turned off to release
the trapped particle. The real-time plot of fractional contrast in Figure a (top) demonstrates
that each trapping event exhibits slightly different contrast. These
differences are likely due to heterogeneity in bead diameter, which
was also observed and quantified by transmission electron microscopy
(TEM) (Figure ; also
see Note S1 and Figure S5).
Figure 3
Trapping of a 40 nm gold
nanoparticle. (a) Absolute fractional
contrast signal during real-time operation of the trap, showing times
when the feedback is on (unshaded) and when it is off (gray-shaded).
For a trapping event, the ISABEL signal is shown per frame and also
averaged over 10 ms. The asterisk shows a particle diffusing through
the trap. The lower curve shows the x, y, and radial estimated positions of the particle in a 10 ms window.
(b) Empty trap background image averaged over 250 ms (indicated by
the “Background” arrow in a) and image of the trapped
object (indicated by the “Trapped” arrow in a). The
white × marks the center pixel of the trap.
Figure 4
The experimentally measured interferometric scattering contrast
from trapped gold nanoparticles scales as d3. Gold nanoparticles of nominal diameters 20, 30, 40, 50, and 60
nm were trapped (contrast values from Figure S6). The diameters of these samples were determined from TEM images
(selected images are inset, with scale bars representing 50 nm; values
are from Figure S5). The symbols and error
bars represent means and standard deviations. The mean calculated
scattering cross sections (σ) for the smallest and largest of
the gold bead samples are 0.6 and 800 nm2, respectively.
Trapping of a 40 nm gold
nanoparticle. (a) Absolute fractional
contrast signal during real-time operation of the trap, showing times
when the feedback is on (unshaded) and when it is off (gray-shaded).
For a trapping event, the ISABEL signal is shown per frame and also
averaged over 10 ms. The asterisk shows a particle diffusing through
the trap. The lower curve shows the x, y, and radial estimated positions of the particle in a 10 ms window.
(b) Empty trap background image averaged over 250 ms (indicated by
the “Background” arrow in a) and image of the trapped
object (indicated by the “Trapped” arrow in a). The
white × marks the center pixel of the trap.The experimentally measured interferometric scattering contrast
from trapped gold nanoparticles scales as d3. Gold nanoparticles of nominal diameters 20, 30, 40, 50, and 60
nm were trapped (contrast values from Figure S6). The diameters of these samples were determined from TEM images
(selected images are inset, with scale bars representing 50 nm; values
are from Figure S5). The symbols and error
bars represent means and standard deviations. The mean calculated
scattering cross sections (σ) for the smallest and largest of
the gold bead samples are 0.6 and 800 nm2, respectively.To quantify the functional relationship
between bead diameter and
absolute fractional contrast and to assess whether the relationship
follows the expected linear trend with the cube of the diameter (d3), we separately trapped samples containing
gold nanoparticles of five different diameters. Aliquots from the
same samples were characterized via TEM to quantify the particle size
(see Figures S5 and S6). In Figure , the means and standard deviations
of the average absolute fractional contrasts for the nanoparticle
samples are plotted against the diameters from TEM. The best-fit cubic
trend is shown (additional fit details are given in Note S5 and Figure S6). The scattering contrasts are consistent
with the expected d3 scaling for interferometric
scattering. By comparison, the expected scaling for the scattering-only
signal alone is d6, as shown by the dashed
line.To further demonstrate the utility of the ISABEL trap
to confine
and measure single nanoscale particles that have weak or variable
fluorescence, we performed trapping of different types of fluorescent
nanoparticles. Figure a shows the (top) fluorescence and (bottom) interferometric scattering
absolute fractional contrast traces for a trapped fluorescent polystyrene
bead (FluoSpheres F8789, Thermo Fisher). The expected scattering cross
section of this particle is ∼1 nm2, comparable to
a gold bead with a diameter of ∼20 nm, and consistent with
the observed contrast of 0.2%. Although the fluorescence signal from
the bead photobleaches in just a few seconds under high excitation,
the bead remains trapped almost indefinitely—illustrated here
by an additional 30 s of trapping. In this case, the scattering signal
and the fluorescence excitation are produced by the same laser, but
it is possible to use two different wavelengths as needed to excite
the fluorescence signal in an optimal way. An accompanying video demonstrating
continuous trapping of a 50 nm gold particle for several minutes is
available in the Supporting Information.
Figure 5
The ISABEL trap can confine and measure very weakly fluorescent
objects. (a) Simultaneous fluorescence and ISABEL signals for a trapped
46 nm fluorescent polystyrene bead. (b) Simultaneous fluorescence
and ISABEL signals for trapped CdSe/CdS nanoparticles.
The ISABEL trap can confine and measure very weakly fluorescent
objects. (a) Simultaneous fluorescence and ISABEL signals for a trapped
46 nm fluorescent polystyrene bead. (b) Simultaneous fluorescence
and ISABEL signals for trapped CdSe/CdS nanoparticles.Figure b shows
the (top) fluorescence and (bottom) interferometric scattering signals
for a trapped CdSe semiconductor nanoparticle coated with a thick
shell of CdS, with an approximate effective diameter of ∼20
nm or less, which is much smaller than the polystyrene beads. In this
batch of particles, the observed fluorescence intensity is highly
heterogeneous from particle to particle and exhibits significant emission
fluctuations within individual trapping events. Although variability
is also observed in the interferometric scattering signal among particles,
consistent with the heterogeneous particle morphology (see Figure S7), within each trapping event the interferometric
scattering signal remains constant.In summary, we have demonstrated
a single-nanoparticle device,
the ISABEL trap, which utilizes interferometric scattering to enable
fast position detection and closed-loop feedback trapping of nanoscale
particles in solution. In contrast to a dark-field detection approach,
the ISABEL trap readily confines objects <100 nm diameter. With
future optimization of trap design and stability, it should be possible
to trap single objects as small as those that have been tracked using
other interferometric scattering techniques. This would require higher
illumination power, increased integration time, and an optimized illumination
pattern combined with optimized detection and feedback algorithms.
Critically, the ISABEL trap decouples the ability to trap a particle
from spectroscopic or other observations of its nature and photophysical
behavior and therefore permits trapping of a broadly expanded range
of nanoscale objects to include those that either do not fluoresce
or fluoresce only weakly or intermittently. We therefore anticipate
that this approach will prove useful for a wide range of future applications
in single-molecule biophysical and single-nanoparticle studies in
free solution.
Authors: William B Carpenter; Abhijit A Lavania; Julia S Borden; Luke M Oltrogge; Davis Perez; Peter D Dahlberg; David F Savage; W E Moerner Journal: J Phys Chem Lett Date: 2022-05-13 Impact factor: 6.888