Literature DB >> 33241761

New progresses of circular RNA biology: from nuclear export to degradation.

Min Zhou1,2, Mei-Sheng Xiao3, Zhengguo Li1,2, Chuan Huang1,2.   

Abstract

Circular RNA, typically generated from backsplicing reaction, is a class of single-stranded and covalently linked RNA. Although most circular RNAs are lowly expressed, some of them are able to accumulate to high levels and even exceed their cognate mRNAs due to their longer half-lives. Once produced in the nucleus, the majority of circular RNAs are exported to the cytoplasm for their proper functions or degradation. In this review, we will summarize the biogenesis and classification of circular RNAs and highlight the recent advances in our understanding of circular RNA nuclear export and degradation.

Entities:  

Keywords:  Pre-mRNA splicing; RNA-binding protein; backsplicing; circular RNA; degradation; nuclear export

Mesh:

Substances:

Year:  2020        PMID: 33241761      PMCID: PMC8489929          DOI: 10.1080/15476286.2020.1853977

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  92 in total

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Authors:  Markus C Wahl; Cindy L Will; Reinhard Lührmann
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

2.  Co-transcriptional splicing of constitutive and alternative exons.

Authors:  Amy Pandya-Jones; Douglas L Black
Journal:  RNA       Date:  2009-08-05       Impact factor: 4.942

3.  Analysis of intron sequences reveals hallmarks of circular RNA biogenesis in animals.

Authors:  Andranik Ivanov; Sebastian Memczak; Emanuel Wyler; Francesca Torti; Hagit T Porath; Marta R Orejuela; Michael Piechotta; Erez Y Levanon; Markus Landthaler; Christoph Dieterich; Nikolaus Rajewsky
Journal:  Cell Rep       Date:  2014-12-31       Impact factor: 9.423

4.  Precise annotation of human, chimpanzee, rhesus macaque and mouse mitochondrial genomes leads to insight into mitochondrial transcription in mammals.

Authors:  Xiufeng Jin; Zhi Cheng; Bo Wang; Tung On Yau; Ze Chen; Stephen C Barker; Defu Chen; Wenjun Bu; Daqing Sun; Shan Gao
Journal:  RNA Biol       Date:  2020-01-10       Impact factor: 4.652

5.  Genome-Wide Maps of m6A circRNAs Identify Widespread and Cell-Type-Specific Methylation Patterns that Are Distinct from mRNAs.

Authors:  Chan Zhou; Benoit Molinie; Kaveh Daneshvar; Joshua V Pondick; Jinkai Wang; Nicholas Van Wittenberghe; Yi Xing; Cosmas C Giallourakis; Alan C Mullen
Journal:  Cell Rep       Date:  2017-08-29       Impact factor: 9.423

Review 6.  circRNAs in Cancer.

Authors:  Ines Lucia Patop; Sebastian Kadener
Journal:  Curr Opin Genet Dev       Date:  2017-12-12       Impact factor: 5.578

7.  An Insulin-Sensitive Circular RNA that Regulates Lifespan in Drosophila.

Authors:  Carina Marianne Weigelt; Rohan Sehgal; Luke Stephen Tain; Jun Cheng; Jacqueline Eßer; André Pahl; Christoph Dieterich; Sebastian Grönke; Linda Partridge
Journal:  Mol Cell       Date:  2020-06-26       Impact factor: 17.970

Review 8.  Pathways to balance mitochondrial translation and protein import.

Authors:  Chantal Priesnitz; Thomas Becker
Journal:  Genes Dev       Date:  2018-10-01       Impact factor: 11.361

9.  Long and Repeat-Rich Intronic Sequences Favor Circular RNA Formation under Conditions of Reduced Spliceosome Activity.

Authors:  Mantian Wang; Jingyi Hou; Michaela Müller-McNicoll; Wei Chen; Erin M Schuman
Journal:  iScience       Date:  2019-09-06

10.  A length-dependent evolutionarily conserved pathway controls nuclear export of circular RNAs.

Authors:  Chuan Huang; Dongming Liang; Deirdre C Tatomer; Jeremy E Wilusz
Journal:  Genes Dev       Date:  2018-05-17       Impact factor: 11.361

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  4 in total

1.  Identification of circRNA_001846 as putative non-small cell lung cancer biomarker.

Authors:  Fan Yang; Chunlan Ma; Jing Qiu; Xiaoli Feng; Kai Yang
Journal:  Bioengineered       Date:  2021-12       Impact factor: 3.269

2.  The DEAD-box helicase Hlc regulates basal transcription and chromatin opening of stress-responsive genes.

Authors:  Ruirui Jia; Jiamei Lin; Jin You; Shi Li; Ge Shan; Chuan Huang
Journal:  Nucleic Acids Res       Date:  2022-08-11       Impact factor: 19.160

3.  Upregulation of circ_0008812 and circ_0001583 predicts poor prognosis and promotes breast cancer proliferation.

Authors:  Hong Lin; Fangyi Long; Xiqian Zhang; Pinghan Wang; Ting Wang
Journal:  Front Mol Biosci       Date:  2022-09-19

4.  MSC-AS1 knockdown inhibits cell growth and temozolomide resistance by regulating miR-373-3p/CPEB4 axis in glioma through PI3K/Akt pathway.

Authors:  Chong Li; Shiyu Feng; Ling Chen
Journal:  Mol Cell Biochem       Date:  2020-10-26       Impact factor: 3.396

  4 in total

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