Literature DB >> 31102199

Function-related conformational dynamics of G protein-coupled receptors revealed by NMR.

Takumi Ueda1,2, Yutaka Kofuku1, Junya Okude1, Shunsuke Imai1, Yutaro Shiraishi1, Ichio Shimada3.   

Abstract

G protein-coupled receptors (GPCRs) function as receptors for various neurotransmitters, hormones, cytokines, and metabolites. GPCR ligands impart differing degrees of signaling in the G protein and arrestin pathways, in phenomena called biased signaling, and each ligand for a given GPCR has a characteristic level of ability to activate or deactivate its target, which is referred to as its efficacy. The ligand efficacies and biased signaling of GPCRs remarkably affect the therapeutic properties of the ligands. However, these features of GPCRs can only be partially understood from the crystallography data, although numerous GPCR structures have been solved. NMR analyses have revealed that GPCRs have multiple interconverting substates, exchanging on various timescales, and that the exchange rates are related to the ligand efficacies and biased signaling. In addition, NMR analyses of GPCRs in the lipid bilayer environment of rHDLs revealed that the exchange rates are modulated by the lipid bilayer environment, highlighting the importance of the function-related dynamics in the lipid bilayer. In this review, we will describe several solution NMR studies that have clarified the conformational dynamics related to the ligand efficacy and biased signaling of GPCRs.

Entities:  

Keywords:  Adrenergic receptor; Membrane protein; Nanodiscs; Nuclear magnetic resonance; Opioid receptor

Year:  2019        PMID: 31102199      PMCID: PMC6557943          DOI: 10.1007/s12551-019-00539-w

Source DB:  PubMed          Journal:  Biophys Rev        ISSN: 1867-2450


  38 in total

1.  Conformational dependence of 13C shielding and coupling constants for methionine methyl groups.

Authors:  Glenn L Butterfoss; Eugene F DeRose; Scott A Gabel; Lalith Perera; Joseph M Krahn; Geoffrey A Mueller; Xunhai Zheng; Robert E London
Journal:  J Biomol NMR       Date:  2010-08-24       Impact factor: 2.835

Review 2.  Observing biological dynamics at atomic resolution using NMR.

Authors:  Anthony K Mittermaier; Lewis E Kay
Journal:  Trends Biochem Sci       Date:  2009-10-19       Impact factor: 13.807

3.  Quantification of receptor tyrosine kinase transactivation through direct dimerization and surface density measurements in single cells.

Authors:  Jody L Swift; Antoine G Godin; Kim Doré; Laure Freland; Nathalie Bouchard; Chelsea Nimmo; Mikhail Sergeev; Yves De Koninck; Paul W Wiseman; Jean-Martin Beaulieu
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-11       Impact factor: 11.205

Review 4.  Functional dynamics of proteins revealed by solution NMR.

Authors:  Masanori Osawa; Koh Takeuchi; Takumi Ueda; Noritaka Nishida; Ichio Shimada
Journal:  Curr Opin Struct Biol       Date:  2012-09-20       Impact factor: 6.809

5.  Biased signaling pathways in β2-adrenergic receptor characterized by 19F-NMR.

Authors:  Jeffrey J Liu; Reto Horst; Vsevolod Katritch; Raymond C Stevens; Kurt Wüthrich
Journal:  Science       Date:  2012-01-19       Impact factor: 47.728

6.  Enhanced morphine analgesia in mice lacking beta-arrestin 2.

Authors:  L M Bohn; R J Lefkowitz; R R Gainetdinov; K Peppel; M G Caron; F T Lin
Journal:  Science       Date:  1999-12-24       Impact factor: 47.728

7.  Activation and deactivation kinetics of alpha 2A- and alpha 2C-adrenergic receptor-activated G protein-activated inwardly rectifying K+ channel currents.

Authors:  M Bünemann; M M Bücheler; M Philipp; M J Lohse; L Hein
Journal:  J Biol Chem       Date:  2001-10-08       Impact factor: 5.157

8.  Deuteration and selective labeling of alanine methyl groups of β2-adrenergic receptor expressed in a baculovirus-insect cell expression system.

Authors:  Yutaka Kofuku; Tomoki Yokomizo; Shunsuke Imai; Yutaro Shiraishi; Mei Natsume; Hiroaki Itoh; Masayuki Inoue; Kunio Nakata; Shunsuke Igarashi; Hideyuki Yamaguchi; Toshimi Mizukoshi; Ei-Ichiro Suzuki; Takumi Ueda; Ichio Shimada
Journal:  J Biomol NMR       Date:  2018-03-08       Impact factor: 2.835

9.  Multiple ligand-specific conformations of the β2-adrenergic receptor.

Authors:  Alem W Kahsai; Kunhong Xiao; Sudarshan Rajagopal; Seungkirl Ahn; Arun K Shukla; Jinpeng Sun; Terrence G Oas; Robert J Lefkowitz
Journal:  Nat Chem Biol       Date:  2011-08-21       Impact factor: 15.040

10.  Single-molecule analysis of ligand efficacy in β2AR-G-protein activation.

Authors:  G Glenn Gregorio; Matthieu Masureel; Daniel Hilger; Daniel S Terry; Manuel Juette; Hong Zhao; Zhou Zhou; Jose Manuel Perez-Aguilar; Maria Hauge; Signe Mathiasen; Jonathan A Javitch; Harel Weinstein; Brian K Kobilka; Scott C Blanchard
Journal:  Nature       Date:  2017-06-07       Impact factor: 49.962

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  4 in total

Review 1.  Opportunities and Challenges of Backbone, Sidechain, and RDC Experiments to Study Membrane Protein Dynamics in a Detergent-Free Lipid Environment Using Solution State NMR.

Authors:  Stefan Bibow
Journal:  Front Mol Biosci       Date:  2019-10-25

2.  The Dynamics of the Neuropeptide Y Receptor Type 1 Investigated by Solid-State NMR and Molecular Dynamics Simulation.

Authors:  Alexander Vogel; Mathias Bosse; Marcel Gauglitz; Sarah Wistuba; Peter Schmidt; Anette Kaiser; Vsevolod V Gurevich; Annette G Beck-Sickinger; Peter W Hildebrand; Daniel Huster
Journal:  Molecules       Date:  2020-11-24       Impact factor: 4.411

3.  Identification of ligand-specific G protein-coupled receptor states and prediction of downstream efficacy via data-driven modeling.

Authors:  Oliver Fleetwood; Jens Carlsson; Lucie Delemotte
Journal:  Elife       Date:  2021-01-28       Impact factor: 8.140

4.  Vibrational analysis of acetylcholine binding to the M2 receptor.

Authors:  Kohei Suzuki; Kota Katayama; Yuji Sumii; Tomoya Nakagita; Ryoji Suno; Hirokazu Tsujimoto; So Iwata; Takuya Kobayashi; Norio Shibata; Hideki Kandori
Journal:  RSC Adv       Date:  2021-04-07       Impact factor: 3.361

  4 in total

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