Literature DB >> 31065411

Open-source, machine and deep learning-based automated algorithm for gestational age estimation through smartphone lens imaging.

Arjun D Desai1,2, Chunlei Peng1,3, Leyuan Fang1, Dibyendu Mukherjee1, Andrew Yeung1, Stephanie J Jaffe1, Jennifer B Griffin4, Sina Farsiu1,5,2.   

Abstract

Gestational age estimation at time of birth is critical for determining the degree of prematurity of the infant and for administering appropriate postnatal treatment. We present a fully automated algorithm for estimating gestational age of premature infants through smartphone lens imaging of the anterior lens capsule vasculature (ALCV). Our algorithm uses a fully convolutional network and blind image quality analyzers to segment usable anterior capsule regions. Then, it extracts ALCV features using a residual neural network architecture and trains on these features using a support vector machine-based classifier. The classification algorithm is validated using leave-one-out cross-validation on videos captured from 124 neonates. The algorithm is expected to be an influential tool for remote and point-of-care gestational age estimation of premature neonates in low-income countries. To this end, we have made the software open source.

Entities:  

Year:  2018        PMID: 31065411      PMCID: PMC6491013          DOI: 10.1364/BOE.9.006038

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  25 in total

1.  Detecting Preperimetric Glaucoma with Standard Automated Perimetry Using a Deep Learning Classifier.

Authors:  Ryo Asaoka; Hiroshi Murata; Aiko Iwase; Makoto Araie
Journal:  Ophthalmology       Date:  2016-07-07       Impact factor: 12.079

2.  Exploratory Dijkstra forest based automatic vessel segmentation: applications in video indirect ophthalmoscopy (VIO).

Authors:  Rolando Estrada; Carlo Tomasi; Michelle T Cabrera; David K Wallace; Sharon F Freedman; Sina Farsiu
Journal:  Biomed Opt Express       Date:  2012-01-18       Impact factor: 3.732

3.  Blind image quality assessment through anisotropy.

Authors:  Salvador Gabarda; Gabriel Cristóbal
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2007-12       Impact factor: 2.129

4.  A computational approach to edge detection.

Authors:  J Canny
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  1986-06       Impact factor: 6.226

Review 5.  Deep learning.

Authors:  Yann LeCun; Yoshua Bengio; Geoffrey Hinton
Journal:  Nature       Date:  2015-05-28       Impact factor: 49.962

6.  Fully automated detection of diabetic macular edema and dry age-related macular degeneration from optical coherence tomography images.

Authors:  Pratul P Srinivasan; Leo A Kim; Priyatham S Mettu; Scott W Cousins; Grant M Comer; Joseph A Izatt; Sina Farsiu
Journal:  Biomed Opt Express       Date:  2014-09-12       Impact factor: 3.732

7.  Expert Diagnosis of Plus Disease in Retinopathy of Prematurity From Computer-Based Image Analysis.

Authors:  J Peter Campbell; Esra Ataer-Cansizoglu; Veronica Bolon-Canedo; Alican Bozkurt; Deniz Erdogmus; Jayashree Kalpathy-Cramer; Samir N Patel; James D Reynolds; Jason Horowitz; Kelly Hutcheson; Michael Shapiro; Michael X Repka; Phillip Ferrone; Kimberly Drenser; Maria Ana Martinez-Castellanos; Susan Ostmo; Karyn Jonas; R V Paul Chan; Michael F Chiang
Journal:  JAMA Ophthalmol       Date:  2016-06-01       Impact factor: 7.389

8.  Automatic differentiation of color fundus images containing drusen or exudates using a contextual spatial pyramid approach.

Authors:  Mark J J P van Grinsven; Thomas Theelen; Leonard Witkamp; Job van der Heijden; Johannes P H van de Ven; Carel B Hoyng; Bram van Ginneken; Clara I Sánchez
Journal:  Biomed Opt Express       Date:  2016-02-02       Impact factor: 3.732

9.  Enhanced video indirect ophthalmoscopy (VIO) via robust mosaicing.

Authors:  Rolando Estrada; Carlo Tomasi; Michelle T Cabrera; David K Wallace; Sharon F Freedman; Sina Farsiu
Journal:  Biomed Opt Express       Date:  2011-09-29       Impact factor: 3.732

Review 10.  Born too soon: the global epidemiology of 15 million preterm births.

Authors:  Hannah Blencowe; Simon Cousens; Doris Chou; Mikkel Oestergaard; Lale Say; Ann-Beth Moller; Mary Kinney; Joy Lawn
Journal:  Reprod Health       Date:  2013-11-15       Impact factor: 3.223

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  5 in total

1.  Open-Source Automatic Segmentation of Ocular Structures and Biomarkers of Microbial Keratitis on Slit-Lamp Photography Images Using Deep Learning.

Authors:  Jessica Loo; Matthias F Kriegel; Megan M Tuohy; Kyeong Hwan Kim; Venkatesh Prajna; Maria A Woodward; Sina Farsiu
Journal:  IEEE J Biomed Health Inform       Date:  2021-01-05       Impact factor: 5.772

2.  RAC-CNN: multimodal deep learning based automatic detection and classification of rod and cone photoreceptors in adaptive optics scanning light ophthalmoscope images.

Authors:  David Cunefare; Alison L Huckenpahler; Emily J Patterson; Alfredo Dubra; Joseph Carroll; Sina Farsiu
Journal:  Biomed Opt Express       Date:  2019-07-08       Impact factor: 3.562

3.  Postnatal gestational age estimation via newborn screening analysis: application and potential.

Authors:  Lindsay A Wilson; Malia Sq Murphy; Robin Ducharme; Kathryn Denize; Nafisa M Jadavji; Beth Potter; Julian Little; Pranesh Chakraborty; Steven Hawken; Kumanan Wilson
Journal:  Expert Rev Proteomics       Date:  2019-08-17       Impact factor: 3.940

Review 4.  Deep biomarkers of aging and longevity: from research to applications.

Authors:  Alex Zhavoronkov; Ricky Li; Candice Ma; Polina Mamoshina
Journal:  Aging (Albany NY)       Date:  2019-11-25       Impact factor: 5.682

5.  Characterization of the retinal vasculature in fundus photos using the PanOptic iExaminer system.

Authors:  Huiling Hu; Haicheng Wei; Mingxia Xiao; Liqiong Jiang; Huijuan Wang; Hong Jiang; Tatjana Rundek; Jianhua Wang
Journal:  Eye Vis (Lond)       Date:  2020-09-08
  5 in total

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