Literature DB >> 31005680

High-symmetry protein assemblies: patterns and emerging applications.

Kevin A Cannon1, Jessica M Ochoa2, Todd O Yeates3.   

Abstract

The accelerated elucidation of three-dimensional structures of protein complexes, both natural and designed, is providing new examples of large supramolecular assemblies with intriguing shapes. Those with high symmetry - based on the geometries of the Platonic solids - are particularly notable as their innately closed forms create interior spaces with varying degrees of enclosure. We survey known protein assemblies of this type and discuss their geometric features. The results bear on issues of protein function and evolution, while also guiding novel bioengineering applications. Recent successes using high-symmetry protein assemblies for applications in interior encapsulation and exterior display are highlighted.
Copyright © 2019 Elsevier Ltd. All rights reserved.

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Year:  2019        PMID: 31005680     DOI: 10.1016/j.sbi.2019.03.008

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  14 in total

1.  A complete rule set for designing symmetry combination materials from protein molecules.

Authors:  Joshua Laniado; Todd O Yeates
Journal:  Proc Natl Acad Sci U S A       Date:  2020-11-25       Impact factor: 11.205

2.  Symmetry breaking and structural polymorphism in a bacterial microcompartment shell protein for choline utilization.

Authors:  Jessica M Ochoa; Vy N Nguyen; Mengxiao Nie; Michael R Sawaya; Thomas A Bobik; Todd O Yeates
Journal:  Protein Sci       Date:  2020-09-14       Impact factor: 6.725

3.  Design and structure of two new protein cages illustrate successes and ongoing challenges in protein engineering.

Authors:  Kevin A Cannon; Rachel U Park; Scott E Boyken; Una Nattermann; Sue Yi; David Baker; Neil P King; Todd O Yeates
Journal:  Protein Sci       Date:  2019-12-26       Impact factor: 6.725

Review 4.  Protein Assembly by Design.

Authors:  Jie Zhu; Nicole Avakyan; Albert Kakkis; Alexander M Hoffnagle; Kenneth Han; Yiying Li; Zhiyin Zhang; Tae Su Choi; Youjeong Na; Chung-Jui Yu; F Akif Tezcan
Journal:  Chem Rev       Date:  2021-08-18       Impact factor: 72.087

5.  Symmetric Molecular Dynamics.

Authors:  Sam Cox; Andrew D White
Journal:  J Chem Theory Comput       Date:  2022-06-14       Impact factor: 6.578

Review 6.  Engineering spatiotemporal organization and dynamics in synthetic cells.

Authors:  Alessandro Groaz; Hossein Moghimianavval; Franco Tavella; Tobias W Giessen; Anthony G Vecchiarelli; Qiong Yang; Allen P Liu
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2020-11-21

7.  Evolution of a virus-like architecture and packaging mechanism in a repurposed bacterial protein.

Authors:  Stephan Tetter; Naohiro Terasaka; Angela Steinauer; Richard J Bingham; Sam Clark; Andrew J P Scott; Nikesh Patel; Marc Leibundgut; Emma Wroblewski; Nenad Ban; Peter G Stockley; Reidun Twarock; Donald Hilvert
Journal:  Science       Date:  2021-06-11       Impact factor: 47.728

8.  Enzyme-Directed Functionalization of Designed, Two-Dimensional Protein Lattices.

Authors:  Rohit H Subramanian; Yuta Suzuki; Lorillee Tallorin; Swagat Sahu; Matthew Thompson; Nathan C Gianneschi; Michael D Burkart; F Akif Tezcan
Journal:  Biochemistry       Date:  2020-08-03       Impact factor: 3.162

Review 9.  The ZT Biopolymer: A Self-Assembling Protein Scaffold for Stem Cell Applications.

Authors:  Yevheniia Nesterenko; Christopher J Hill; Jennifer R Fleming; Patricia Murray; Olga Mayans
Journal:  Int J Mol Sci       Date:  2019-09-03       Impact factor: 5.923

10.  The near-symmetry of protein oligomers: NMR-derived structures.

Authors:  Maayan Bonjack; David Avnir
Journal:  Sci Rep       Date:  2020-05-20       Impact factor: 4.379

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