Literature DB >> 33219745

Engineering spatiotemporal organization and dynamics in synthetic cells.

Alessandro Groaz1, Hossein Moghimianavval1, Franco Tavella1, Tobias W Giessen2, Anthony G Vecchiarelli1, Qiong Yang1, Allen P Liu1.   

Abstract

Constructing synthetic cells has recently become an appealing area of research. Decades of research in biochemistry and cell biology have amassed detailed part lists of components involved in various cellular processes. Nevertheless, recreating any cellular process in vitro in cell-sized compartments remains ambitious and challenging. Two broad features or principles are key to the development of synthetic cells-compartmentalization and self-organization/spatiotemporal dynamics. In this review article, we discuss the current state of the art and research trends in the engineering of synthetic cell membranes, development of internal compartmentalization, reconstitution of self-organizing dynamics, and integration of activities across scales of space and time. We also identify some research areas that could play a major role in advancing the impact and utility of engineered synthetic cells. This article is categorized under: Biology-Inspired Nanomaterials > Lipid-Based Structures Biology-Inspired Nanomaterials > Protein and Virus-Based Structures.
© 2020 Wiley Periodicals LLC.

Entities:  

Keywords:  artificial cells; in vitro reconstitution; protein compartment; synthetic cell

Year:  2020        PMID: 33219745      PMCID: PMC8162676          DOI: 10.1002/wnan.1685

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol        ISSN: 1939-0041


  238 in total

1.  Characterization of a Mycobacterium tuberculosis nanocompartment and its potential cargo proteins.

Authors:  Heidi Contreras; Matthew S Joens; Lisa M McMath; Vincent P Le; Michael V Tullius; Jaqueline M Kimmey; Neda Bionghi; Marcus A Horwitz; James A J Fitzpatrick; Celia W Goulding
Journal:  J Biol Chem       Date:  2014-05-22       Impact factor: 5.157

2.  The effects of cell sizes, environmental conditions, and growth phases on the strength of individual W303 yeast cells inside ESEM.

Authors:  Mohd Ridzuan Ahmad; Masahiro Nakajima; Seiji Kojima; Michio Homma; Toshio Fukuda
Journal:  IEEE Trans Nanobioscience       Date:  2008-09       Impact factor: 2.935

3.  Diversity in the dynamical behaviour of a compartmentalized programmable biochemical oscillator.

Authors:  Maximilian Weitz; Jongmin Kim; Korbinian Kapsner; Erik Winfree; Elisa Franco; Friedrich C Simmel
Journal:  Nat Chem       Date:  2014-02-16       Impact factor: 24.427

4.  A High-Throughput Mutational Scan of an Intrinsically Disordered Acidic Transcriptional Activation Domain.

Authors:  Max V Staller; Alex S Holehouse; Devjanee Swain-Lenz; Rahul K Das; Rohit V Pappu; Barak A Cohen
Journal:  Cell Syst       Date:  2018-03-07       Impact factor: 10.304

5.  Phase transitions in the assembly of multivalent signalling proteins.

Authors:  Pilong Li; Sudeep Banjade; Hui-Chun Cheng; Soyeon Kim; Baoyu Chen; Liang Guo; Marc Llaguno; Javoris V Hollingsworth; David S King; Salman F Banani; Paul S Russo; Qiu-Xing Jiang; B Tracy Nixon; Michael K Rosen
Journal:  Nature       Date:  2012-03-07       Impact factor: 49.962

6.  CIDER: Resources to Analyze Sequence-Ensemble Relationships of Intrinsically Disordered Proteins.

Authors:  Alex S Holehouse; Rahul K Das; James N Ahad; Mary O G Richardson; Rohit V Pappu
Journal:  Biophys J       Date:  2017-01-10       Impact factor: 4.033

7.  Synchrony and pattern formation of coupled genetic oscillators on a chip of artificial cells.

Authors:  Alexandra M Tayar; Eyal Karzbrun; Vincent Noireaux; Roy H Bar-Ziv
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-16       Impact factor: 11.205

8.  RNA phase transitions in repeat expansion disorders.

Authors:  Ankur Jain; Ronald D Vale
Journal:  Nature       Date:  2017-05-31       Impact factor: 49.962

9.  In Vitro Reconstitution of Self-Organizing Protein Patterns on Supported Lipid Bilayers.

Authors:  Beatrice Ramm; Philipp Glock; Petra Schwille
Journal:  J Vis Exp       Date:  2018-07-28       Impact factor: 1.355

10.  De novo synthesized Min proteins drive oscillatory liposome deformation and regulate FtsA-FtsZ cytoskeletal patterns.

Authors:  Elisa Godino; Jonás Noguera López; David Foschepoth; Céline Cleij; Anne Doerr; Clara Ferrer Castellà; Christophe Danelon
Journal:  Nat Commun       Date:  2019-10-31       Impact factor: 14.919

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  4 in total

1.  Rapid Encapsulation of Reconstituted Cytoskeleton Inside Giant Unilamellar Vesicles.

Authors:  Yashar Bashirzadeh; Nadab Wubshet; Thomas Litschel; Petra Schwille; Allen P Liu
Journal:  J Vis Exp       Date:  2021-11-10       Impact factor: 1.424

2.  Encapsulated actomyosin patterns drive cell-like membrane shape changes.

Authors:  Yashar Bashirzadeh; Hossein Moghimianavval; Allen P Liu
Journal:  iScience       Date:  2022-04-12

Review 3.  Synthetic Cell as a Platform for Understanding Membrane-Membrane Interactions.

Authors:  Bineet Sharma; Hossein Moghimianavval; Sung-Won Hwang; Allen P Liu
Journal:  Membranes (Basel)       Date:  2021-11-23

4.  Spatiotemporal dynamics of self-assembled structures in enzymatically induced agonistic and antagonistic conditions.

Authors:  Ekta Shandilya; Surinder Kaur Brar; Rishi Ram Mahato; Subhabrata Maiti
Journal:  Chem Sci       Date:  2021-11-22       Impact factor: 9.825

  4 in total

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