| Literature DB >> 30971315 |
Yiming Qi1,2, Jiexia Yang1,2, Yaping Hou1,2, Fangfang Guo1,2, Haishan Peng1,2, Dongmei Wang1,2, Qianyi Du1,2, Aihua Yin3,4.
Abstract
BACKGROUND: This study was an evaluation of the role of noninvasive prenatal testing (NIPT) in the detection of trisomy 7 in prenatal diagnosis.Entities:
Keywords: Confined placental mosaicism (CPM); Noninvasive prenatal testing (NIPT); Trisomy 7
Year: 2019 PMID: 30971315 PMCID: PMC6458712 DOI: 10.1186/s40246-019-0201-y
Source DB: PubMed Journal: Hum Genomics ISSN: 1473-9542 Impact factor: 4.639
Maternal characteristics and gestational age of blood sampling
| Clinical basic information | Number |
|---|---|
| Racial | |
| Han nationality | 30 |
| Chuang nationality | 4 |
| Unknown | 1 |
| Maternal age | 30.8 |
| BMI | 21.5 |
| Conception of pregnancy | |
| Naturally conceived | 35 |
| Other | 0 |
| Fetus number | |
| Singleton | 35 |
| Other | 0 |
| Smoking | |
| Yes | 0 |
| None | 35 |
| GA at NIPT | 20 weeks and 4 days |
| Average maternal age | 9 |
| Pregnancy risk factors | |
| High risk of T21 | 15 |
| Intermediate risk of T21 | 9 |
| Single HCG MOM | 4 |
| HCG MOM | 28 |
| Widening of posterior cranial fossa | 2 |
| Threatened premature birth | 1 |
| Rh incompatibility | 1 |
↑: HCG MOM increase
NIPT results of 35 high-risk pregnant women
| Case | cfDNA fraction | Reads | Other abnormalities | |
|---|---|---|---|---|
| 1 | 9.1 | 4.86 | 12.682 | / |
| 2 | 17.2 | 3.94 | 17.21 | / |
| 3 | 16.1 | 4.69 | 11.38 | / |
| 4 | 31.8 | 3.31 | 49.43 | / |
| 5 | 15.7 | 4.42 | 14.811 | / |
| 6 | 18.5 | 4.61 | 12.351 | / |
| 7 | 26.1 | 3.67 | 16.104 | / |
| 8 | 19.8 | 3.51 | 21.037 | / |
| 9 | 10.3 | 3.99 | 6.198 | T2 |
| 10 | 18.1 | 5.16 | 26.462 | / |
| 11 | 11.1 | 4.19 | 6.608 | / |
| 12 | 15 | 3.06 | 20.423 | / |
| 13 | 16.1 | 4.19 | 9.163 | / |
| 14 | 33 | 3.34 | 28.678 | / |
| 15 | 16.2 | 4.59 | 19.621 | / |
| 16 | 13.8 | 5.02 | 5.057 | / |
| 17 | 7.4 | 5.93 | 6.051 | / |
| 18 | 24.4 | 4.47 | 11.63 | / |
| 19 | 19.4 | 3.6 | 27.152 | / |
| 20 | 10.4 | 4.05 | 10.44 | / |
| 21 | 12.5 | 4 | 10.781 | T8/T3/T20 M13/M22 |
| 22 | 15.1 | 5.28 | 23.606 | XO |
| 23 | 21 | 4.45 | 26.887 | / |
| 24 | 11.6 | 4.94 | 21.757 | T11 |
| 25 | 25.4 | 4.75 | 16.262 | T3 |
| 26 | 20.4 | 4.07 | 18.185 | T8/T2 |
| 27 | 20.9 | 3.68 | 29.183 | / |
| 28 | 17.6 | 4.28 | 12.686 | / |
| 29 | 11.7 | 4.45 | 25.839 | / |
| 30 | 15.9 | 3.56 | 22.122 | / |
| 31 | 14.2 | 4.48 | 14.649 | / |
| 32 | 11.8 | 3.64 | 10.195 | / |
| 33 | 27.5 | 3.85 | 15.559 | / |
| 34 | 14.5 | 4.86 | 6.557 | / |
| 35 | 11.2 | 4.78 | 9.23 | / |
The NIPT results verified by Karyotype analysis, CMA, and next-generation sequencing (NGS)
| Case | Karyotype analysis | CMA | NGS |
|---|---|---|---|
| 1 | / | / | / |
| 2 | 46,XN | NA | / |
| 3 | 46,XN | NA | / |
| 4 | 46,XN | NA | 47,XX,+ 7 [80]/46,XX [ |
| 5 | / | / | / |
| 6 | / | / | / |
| 7 | / | / | / |
| 8 | 46,XN | NA | 47,XX,+ 7 [20]/46,XX[80] |
| 9 | 46,XN | NA | 48,XX, + 2, + 7 [15]/46,XX[85] |
| 10 | 46,XN | NA | / |
| 11 | / | / | / |
| 12 | 46,XN | NA | 47,XY,+ 7 [70]/46,XY [ |
| 13 | 46,XN | NA | 47,XX,+ 7 [30]/46,XX[70] |
| 14 | 46,XN | NA | / |
| 15 | 46,XN | NA | / |
| 16 | / | / | / |
| 17 | 46,XN | NA | / |
| 18 | / | / | / |
| 19 | 46,XN | NA | / |
| 20 | 46,XN | NA | 47,XX,+ 7 [40]/46,XX[60] |
| 21 | 46,XN | NA | / |
| 22 | 46,XO | 7q21.13q36.3 (89,040,945-159,119,707) × 3/Xp22.33p11.22 (168,551-53,973,366) × 1 | / |
| 23 | 46,XN | 7q11.23 (72,600,482-74,175,485) × 3 | / |
| 24 | 46,XN | NA | 47,XX,+ 7 [15]/46,XX[85] |
| 25 | 46,XN | NA | / |
| 26 | 46,XN | NA | / |
| 27 | / | / | / |
| 28 | 46,XN | NA | 47,XX,+ 7 [65]/46,XX [ |
| 29 | 46,XN | NA | 47,XX,+ 7 [20]/46,XX[80] |
| 30 | 46,XY | NA | / |
| 31 | 46,XN | NA | / |
| 32 | / | / | / |
| 33 | 46,XN | NA | / |
| 34 | / | / | / |
| 35 | 46,XN | NA | 47,XX,+ 7 [15]/46,XX[85] |
CMA chromosomal microarray analysis, NGS next-generation sequencing, NA normal
Fig. 1NIPT and CMA results for case 22 and karyotype results for the parents of case 22. a NIPT result for case 22. Chr7: dup (90 M–157 M); chrX: del (0.1 M–52 M). b CMA result for case 22. The chromosomal regions in the red mark were the missing pieces of that deletion at the position of 7q21.13q36.3(89,040,945-159,119,707), and the blue marks are the missing pieces at the position of Xp22.33p11.22(168,551-53,973,336). c Karyotype results for the parents of case 22 were normal
Fig. 2CMA assay results for case 23 and her parents. a CMA result for case 23. The chromosomal regions in the red circle were the missing pieces of a novo ~ 1.5 Mb deletion at the position of 7q11.23(72,600,482-74,175,485). b CMA result for the father of case 23 were normal. c CMA result for the mother of case 23 were normal, too
Fig. 3Ultrasound examination images. a Ultrasound examination result at 22 weeks. The width of the posterior cranial fossa was 11.4 mm. b Ultrasound examination results at 28 weeks. The width of the posterior cranial fossa was 11.2 mm