Literature DB >> 30938482

A DNA-Encoded Chemical Library Incorporating Elements of Natural Macrocycles.

Cedric J Stress1, Basilius Sauter1, Lukas A Schneider1, Timothy Sharpe2, Dennis Gillingham1.   

Abstract

Here we show a seven-step chemical synthesis of a DNA-encoded macrocycle library (DEML) on DNA. Inspired by polyketide and mixed peptide-polyketide natural products, the library was designed to incorporate rich backbone diversity. Achieving this diversity, however, comes at the cost of the custom synthesis of bifunctional building block libraries. This study outlines the importance of careful retrosynthetic design in DNA-encoded libraries, while revealing areas where new DNA synthetic methods are needed.
© 2019 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DNA chemistry; DNA-encoded libraries; Lipinski rules; chemical libraries; macrocycles

Year:  2019        PMID: 30938482     DOI: 10.1002/anie.201902513

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  14 in total

1.  Considerations for Achieving Maximized DNA Recovery in Solid-Phase DNA-Encoded Library Synthesis.

Authors:  Alexander K Price; Brian M Paegel
Journal:  ACS Comb Sci       Date:  2020-08-24       Impact factor: 3.784

Review 2.  Chemical composition of DNA-encoded libraries, past present and future.

Authors:  Paige Dickson; Thomas Kodadek
Journal:  Org Biomol Chem       Date:  2019-05-15       Impact factor: 3.876

Review 3.  DNA-Encoded Chemical Libraries: A Comprehensive Review with Succesful Stories and Future Challenges.

Authors:  Adrián Gironda-Martínez; Etienne J Donckele; Florent Samain; Dario Neri
Journal:  ACS Pharmacol Transl Sci       Date:  2021-06-14

4.  Synthesis and direct assay of large macrocycle diversities by combinatorial late-stage modification at picomole scale.

Authors:  Sevan Habeshian; Manuel Leonardo Merz; Gontran Sangouard; Ganesh Kumar Mothukuri; Mischa Schüttel; Zsolt Bognár; Cristina Díaz-Perlas; Jonathan Vesin; Julien Bortoli Chapalay; Gerardo Turcatti; Laura Cendron; Alessandro Angelini; Christian Heinis
Journal:  Nat Commun       Date:  2022-07-02       Impact factor: 17.694

5.  Genetically-encoded discovery of proteolytically stable bicyclic inhibitors for morphogen NODAL.

Authors:  Jeffrey Y-K Wong; Raja Mukherjee; Jiayuan Miao; Olena Bilyk; Vivian Triana; Mark Miskolzie; Antoine Henninot; John J Dwyer; Serhii Kharchenko; Anna Iampolska; Dmitriy M Volochnyuk; Yu-Shan Lin; Lynne-Marie Postovit; Ratmir Derda
Journal:  Chem Sci       Date:  2021-06-17       Impact factor: 9.825

6.  High-Throughput Quality Control Assay for the Solid-Phase Synthesis of DNA-Encoded Libraries of Macrocycles*.

Authors:  Animesh Roy; Eric Koesema; Thomas Kodadek
Journal:  Angew Chem Int Ed Engl       Date:  2021-04-13       Impact factor: 15.336

7.  Synthesis and Screening of a DNA-Encoded Library of Non-Peptidic Macrocycles.

Authors:  Eric Koesema; Animesh Roy; Nicholas G Paciaroni; Carlos Coito; Michal Tokmina-Roszyk; Thomas Kodadek
Journal:  Angew Chem Int Ed Engl       Date:  2022-03-02       Impact factor: 16.823

8.  Expanding the Chemical Diversity of Genetically Encoded Libraries.

Authors:  Sabrina E Iskandar; Victoria A Haberman; Albert A Bowers
Journal:  ACS Comb Sci       Date:  2020-11-09       Impact factor: 3.903

Review 9.  DNA-Encoded Chemistry: Drug Discovery from a Few Good Reactions.

Authors:  Patrick R Fitzgerald; Brian M Paegel
Journal:  Chem Rev       Date:  2020-10-12       Impact factor: 72.087

10.  Macrocycle synthesis strategy based on step-wise "adding and reacting" three components enables screening of large combinatorial libraries.

Authors:  Ganesh K Mothukuri; Sangram S Kale; Carl L Stenbratt; Alessandro Zorzi; Jonathan Vesin; Julien Bortoli Chapalay; Kaycie Deyle; Gerardo Turcatti; Laura Cendron; Alessandro Angelini; Christian Heinis
Journal:  Chem Sci       Date:  2020-06-26       Impact factor: 9.825

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