Literature DB >> 30906854

Assessing the Impacts of Correlated Variability with Dissociated Timescales.

Toshiyuki Takahashi1, Yoshiko Maruyama2, Hiroyuki Ito3, Keiji Miura1.   

Abstract

Despite the profound influence on coding capacity of sensory neurons, the measurements of noise correlations have been inconsistent. This is, possibly, because nonstationarity, i.e., drifting baselines, engendered the spurious long-term correlations even if no actual short-term correlation existed. Although attempts to separate them have been made previously, they were ad hoc for specific cases or computationally too demanding. Here we proposed an information-geometric method to unbiasedly estimate pure short-term noise correlations irrespective of the background brain activities without demanding computational resources. First, the benchmark simulations demonstrated that the proposed estimator is more accurate and computationally efficient than the conventional correlograms and the residual correlations with Kalman filters or moving averages of length three or more, while the best moving average of length two coincided with the propose method regarding correlation estimates. Next, we analyzed the cat V1 neural responses to demonstrate that the statistical test accompanying the proposed method combined with the existing nonstationarity test enabled us to dissociate short-term and long-term noise correlations. When we excluded the spurious noise correlations of purely long-term nature, only a small fraction of neuron pairs showed significant short-term correlations, possibly reconciling the previous inconsistent observations on existence of significant noise correlations. The decoding accuracy was slightly improved by the short-term correlations. Although the long-term correlations deteriorated the generalizability, the generalizability was recovered by the decoder with trend removal, suggesting that brains could overcome nonstationarity. Thus, the proposed method enables us to elucidate the impacts of short-term and long-term noise correlations in a dissociated manner.

Entities:  

Keywords:  decoding analysis; information geometry; noise correlations; population codes; primary visual cortex; spontaneous activity

Mesh:

Year:  2019        PMID: 30906854      PMCID: PMC6428564          DOI: 10.1523/ENEURO.0395-18.2019

Source DB:  PubMed          Journal:  eNeuro        ISSN: 2373-2822


  39 in total

1.  Synergy, redundancy, and independence in population codes.

Authors:  Elad Schneidman; William Bialek; Michael J Berry
Journal:  J Neurosci       Date:  2003-12-17       Impact factor: 6.167

2.  Synfire chains and cortical songs: temporal modules of cortical activity.

Authors:  Yuji Ikegaya; Gloster Aaron; Rosa Cossart; Dmitriy Aronov; Ilan Lampl; David Ferster; Rafael Yuste
Journal:  Science       Date:  2004-04-23       Impact factor: 47.728

3.  Small modulation of ongoing cortical dynamics by sensory input during natural vision.

Authors:  József Fiser; Chiayu Chiu; Michael Weliky
Journal:  Nature       Date:  2004-09-30       Impact factor: 49.962

4.  Decorrelated neuronal firing in cortical microcircuits.

Authors:  Alexander S Ecker; Philipp Berens; Georgios A Keliris; Matthias Bethge; Nikos K Logothetis; Andreas S Tolias
Journal:  Science       Date:  2010-01-29       Impact factor: 47.728

Review 5.  Neural correlations, population coding and computation.

Authors:  Bruno B Averbeck; Peter E Latham; Alexandre Pouget
Journal:  Nat Rev Neurosci       Date:  2006-05       Impact factor: 34.870

6.  Adaptive filtering enhances information transmission in visual cortex.

Authors:  Tatyana O Sharpee; Hiroki Sugihara; Andrei V Kurgansky; Sergei P Rebrik; Michael P Stryker; Kenneth D Miller
Journal:  Nature       Date:  2006-02-23       Impact factor: 49.962

7.  Stimulus Dependence of Correlated Variability across Cortical Areas.

Authors:  Douglas A Ruff; Marlene R Cohen
Journal:  J Neurosci       Date:  2016-07-13       Impact factor: 6.167

8.  Synergy, redundancy, and independence in population codes, revisited.

Authors:  Peter E Latham; Sheila Nirenberg
Journal:  J Neurosci       Date:  2005-05-25       Impact factor: 6.709

9.  Diverse coupling of neurons to populations in sensory cortex.

Authors:  Matteo Carandini; Kenneth D Harris; Michael Okun; Nicholas Steinmetz; Lee Cossell; M Florencia Iacaruso; Ho Ko; Péter Barthó; Tirin Moore; Sonja B Hofer; Thomas D Mrsic-Flogel
Journal:  Nature       Date:  2015-04-06       Impact factor: 49.962

10.  Context-dependent changes in functional circuitry in visual area MT.

Authors:  Marlene R Cohen; William T Newsome
Journal:  Neuron       Date:  2008-10-09       Impact factor: 17.173

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.