Literature DB >> 30867242

Clinical Implications of Circulating Tumor DNA Tumor Mutational Burden (ctDNA TMB) in Non-Small Cell Lung Cancer.

Young Kwang Chae1,2,3, Andrew A Davis4,3, Sarita Agte3, Alan Pan2, Nicholas I Simon2, Wade T Iams2,3, Marcelo R Cruz5, Keerthi Tamragouri2, Kyunghoon Rhee2, Nisha Mohindra5,3, Victoria Villaflor5,2,3, Wungki Park6, Gilberto Lopes6, Francis J Giles5,2,3.   

Abstract

BACKGROUND: Tissue tumor mutational burden (TMB) has emerged as a potential biomarker predicting response to anti-programmed cell death-1 protein receptor (PD-1)/programmed cell death-1 protein ligand (PD-L1) therapy, but few studies have explored using circulating tumor DNA (ctDNA) TMB in non-small cell lung cancer (NSCLC).
MATERIALS AND METHODS: A total of 136 patients with NSCLC with ctDNA testing were retrospectively evaluated from a single institution, along with a validation cohort from a second institution. ctDNA TMB was derived using the number of detected mutations over the DNA sequencing length.
RESULTS: Higher ctDNA TMB was significantly correlated with smoking history (p < .05, chi-squared test). Among patients treated with immune checkpoint inhibitors (n = 20), higher ctDNA TMB was significantly correlated with shorter progressive free survival (PFS) and overall survival (OS; 45 vs. 355 days; hazard ratio [HR], 5.6; 95% confidence interval [CI], 1.3-24.6; p < .01, and OS 106 days vs. not reached; HR, 6.0; 95% CI, 1.3-27.1; p < .01, respectively). In a small independent validation cohort (n = 12), there was a nonsignificant numerical difference for higher ctDNA TMB predicting shorter OS but not PFS. ctDNA TMB was not correlated with RECIST tumor burden estimation in the subset of patients treated with immune checkpoint blockade.
CONCLUSION: The findings indicate that higher ctDNA TMB, at the current commercial sequencing length, reflects worse clinical outcomes. IMPLICATIONS FOR PRACTICE: Biomarkers to identify patients who will respond to immune checkpoint blockade are critical. Tissue tumor mutational burden (TMB) has emerged as a viable biomarker to predict response to anti-PD-1/PD-L1 therapy, but few studies have explored the meaning and potential clinical significance of noninvasive, blood-based TMB. Here, we investigated circulating tumor DNA (ctDNA) TMB and present data demonstrating that current ctDNA TMB may reflect tumor burden and that ctDNA panels with a greater number of mutations may be necessary to more accurately reflect tissue TMB. © AlphaMed Press 2019.

Entities:  

Keywords:  Circulating tumor DNA (ctDNA); NSCLC; PD‐1; PD‐L1; Tumor mutational burden (TMB)

Year:  2019        PMID: 30867242      PMCID: PMC6656496          DOI: 10.1634/theoncologist.2018-0433

Source DB:  PubMed          Journal:  Oncologist        ISSN: 1083-7159


  47 in total

1.  Concordance of Genomic Alterations by Next-Generation Sequencing in Tumor Tissue versus Circulating Tumor DNA in Breast Cancer.

Authors:  Young Kwang Chae; Andrew A Davis; Sarika Jain; Cesar Santa-Maria; Lisa Flaum; Nike Beaubier; Leonidas C Platanias; William Gradishar; Francis J Giles; Massimo Cristofanilli
Journal:  Mol Cancer Ther       Date:  2017-04-26       Impact factor: 6.261

2.  DNA fragments in the blood plasma of cancer patients: quantitations and evidence for their origin from apoptotic and necrotic cells.

Authors:  S Jahr; H Hentze; S Englisch; D Hardt; F O Fackelmayer; R D Hesch; R Knippers
Journal:  Cancer Res       Date:  2001-02-15       Impact factor: 12.701

3.  Circulating tumor DNA as an early marker of therapeutic response in patients with metastatic colorectal cancer.

Authors:  J Tie; I Kinde; Y Wang; H L Wong; J Roebert; M Christie; M Tacey; R Wong; M Singh; C S Karapetis; J Desai; B Tran; R L Strausberg; L A Diaz; N Papadopoulos; K W Kinzler; B Vogelstein; P Gibbs
Journal:  Ann Oncol       Date:  2015-04-07       Impact factor: 32.976

4.  Quantitative cell-free DNA, KRAS, and BRAF mutations in plasma from patients with metastatic colorectal cancer during treatment with cetuximab and irinotecan.

Authors:  Karen-Lise Garm Spindler; Niels Pallisgaard; Ivan Vogelius; Anders Jakobsen
Journal:  Clin Cancer Res       Date:  2012-01-06       Impact factor: 12.531

5.  Guidelines for the evaluation of immune therapy activity in solid tumors: immune-related response criteria.

Authors:  Jedd D Wolchok; Axel Hoos; Steven O'Day; Jeffrey S Weber; Omid Hamid; Celeste Lebbé; Michele Maio; Michael Binder; Oliver Bohnsack; Geoffrey Nichol; Rachel Humphrey; F Stephen Hodi
Journal:  Clin Cancer Res       Date:  2009-11-24       Impact factor: 12.531

6.  Use of research biopsies in clinical trials: are risks and benefits adequately discussed?

Authors:  Michael J Overman; Janhavi Modak; Scott Kopetz; Ravi Murthy; James C Yao; Marshall E Hicks; James L Abbruzzese; Alda L Tam
Journal:  J Clin Oncol       Date:  2012-11-05       Impact factor: 44.544

7.  Validation of a Plasma-Based Comprehensive Cancer Genotyping Assay Utilizing Orthogonal Tissue- and Plasma-Based Methodologies.

Authors:  Justin I Odegaard; John J Vincent; Stefanie Mortimer; James V Vowles; Bryan C Ulrich; Kimberly C Banks; Stephen R Fairclough; Oliver A Zill; Marcin Sikora; Reza Mokhtari; Diana Abdueva; Rebecca J Nagy; Christine E Lee; Lesli A Kiedrowski; Cloud P Paweletz; Helmy Eltoukhy; Richard B Lanman; Darya I Chudova; AmirAli Talasaz
Journal:  Clin Cancer Res       Date:  2018-04-24       Impact factor: 12.531

8.  Tracking the Evolution of Non-Small-Cell Lung Cancer.

Authors:  Mariam Jamal-Hanjani; Gareth A Wilson; Nicholas McGranahan; Nicolai J Birkbak; Thomas B K Watkins; Selvaraju Veeriah; Seema Shafi; Diana H Johnson; Richard Mitter; Rachel Rosenthal; Max Salm; Stuart Horswell; Mickael Escudero; Nik Matthews; Andrew Rowan; Tim Chambers; David A Moore; Samra Turajlic; Hang Xu; Siow-Ming Lee; Martin D Forster; Tanya Ahmad; Crispin T Hiley; Christopher Abbosh; Mary Falzon; Elaine Borg; Teresa Marafioti; David Lawrence; Martin Hayward; Shyam Kolvekar; Nikolaos Panagiotopoulos; Sam M Janes; Ricky Thakrar; Asia Ahmed; Fiona Blackhall; Yvonne Summers; Rajesh Shah; Leena Joseph; Anne M Quinn; Phil A Crosbie; Babu Naidu; Gary Middleton; Gerald Langman; Simon Trotter; Marianne Nicolson; Hardy Remmen; Keith Kerr; Mahendran Chetty; Lesley Gomersall; Dean A Fennell; Apostolos Nakas; Sridhar Rathinam; Girija Anand; Sajid Khan; Peter Russell; Veni Ezhil; Babikir Ismail; Melanie Irvin-Sellers; Vineet Prakash; Jason F Lester; Malgorzata Kornaszewska; Richard Attanoos; Haydn Adams; Helen Davies; Stefan Dentro; Philippe Taniere; Brendan O'Sullivan; Helen L Lowe; John A Hartley; Natasha Iles; Harriet Bell; Yenting Ngai; Jacqui A Shaw; Javier Herrero; Zoltan Szallasi; Roland F Schwarz; Aengus Stewart; Sergio A Quezada; John Le Quesne; Peter Van Loo; Caroline Dive; Allan Hackshaw; Charles Swanton
Journal:  N Engl J Med       Date:  2017-04-26       Impact factor: 91.245

9.  Analysis of 100,000 human cancer genomes reveals the landscape of tumor mutational burden.

Authors:  Zachary R Chalmers; Caitlin F Connelly; David Fabrizio; Laurie Gay; Siraj M Ali; Riley Ennis; Alexa Schrock; Brittany Campbell; Adam Shlien; Juliann Chmielecki; Franklin Huang; Yuting He; James Sun; Uri Tabori; Mark Kennedy; Daniel S Lieber; Steven Roels; Jared White; Geoffrey A Otto; Jeffrey S Ross; Levi Garraway; Vincent A Miller; Phillip J Stephens; Garrett M Frampton
Journal:  Genome Med       Date:  2017-04-19       Impact factor: 11.117

10.  Signatures of mutational processes in human cancer.

Authors:  Ludmil B Alexandrov; Serena Nik-Zainal; David C Wedge; Samuel A J R Aparicio; Sam Behjati; Andrew V Biankin; Graham R Bignell; Niccolò Bolli; Ake Borg; Anne-Lise Børresen-Dale; Sandrine Boyault; Birgit Burkhardt; Adam P Butler; Carlos Caldas; Helen R Davies; Christine Desmedt; Roland Eils; Jórunn Erla Eyfjörd; John A Foekens; Mel Greaves; Fumie Hosoda; Barbara Hutter; Tomislav Ilicic; Sandrine Imbeaud; Marcin Imielinski; Marcin Imielinsk; Natalie Jäger; David T W Jones; David Jones; Stian Knappskog; Marcel Kool; Sunil R Lakhani; Carlos López-Otín; Sancha Martin; Nikhil C Munshi; Hiromi Nakamura; Paul A Northcott; Marina Pajic; Elli Papaemmanuil; Angelo Paradiso; John V Pearson; Xose S Puente; Keiran Raine; Manasa Ramakrishna; Andrea L Richardson; Julia Richter; Philip Rosenstiel; Matthias Schlesner; Ton N Schumacher; Paul N Span; Jon W Teague; Yasushi Totoki; Andrew N J Tutt; Rafael Valdés-Mas; Marit M van Buuren; Laura van 't Veer; Anne Vincent-Salomon; Nicola Waddell; Lucy R Yates; Jessica Zucman-Rossi; P Andrew Futreal; Ultan McDermott; Peter Lichter; Matthew Meyerson; Sean M Grimmond; Reiner Siebert; Elías Campo; Tatsuhiro Shibata; Stefan M Pfister; Peter J Campbell; Michael R Stratton
Journal:  Nature       Date:  2013-08-14       Impact factor: 49.962

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  35 in total

Review 1.  Tumor Mutational Burden as a Predictive Biomarker for Response to Immune Checkpoint Inhibitors: A Review of Current Evidence.

Authors:  Samuel J Klempner; David Fabrizio; Shalmali Bane; Marcia Reinhart; Tim Peoples; Siraj M Ali; Ethan S Sokol; Garrett Frampton; Alexa B Schrock; Rachel Anhorn; Prasanth Reddy
Journal:  Oncologist       Date:  2019-10-02

2.  Blood tumor mutation burden can predict the clinical response to immune checkpoint inhibitors in advanced non-small cell lung cancer patients.

Authors:  Xi Chen; Liangjie Fang; Yanping Zhu; Zhang Bao; Qing Wang; Rong Liu; Wenjia Sun; Haiwei Du; Jing Lin; Bing Yu; Songan Chen; Jianya Zhou; Jianying Zhou
Journal:  Cancer Immunol Immunother       Date:  2021-04-25       Impact factor: 6.968

Review 3.  Circulating biomarkers predictive of tumor response to cancer immunotherapy.

Authors:  Ernest Y Lee; Rajan P Kulkarni
Journal:  Expert Rev Mol Diagn       Date:  2019-09-10       Impact factor: 5.225

4.  Genotypes of Papillary Thyroid Carcinoma With High Lateral Neck Metastasis in Chinese Population.

Authors:  Wei Guo; Junwei Huang; Taiping Shi; Hanyuan Duan; Xiaohong Chen; Zhigang Huang
Journal:  Front Oncol       Date:  2022-07-05       Impact factor: 5.738

5.  Hypermutation, Mismatch Repair Deficiency, and Defining Predictors of Response to Checkpoint Blockade.

Authors:  Laura S Graham; Colin C Pritchard; Michael T Schweizer
Journal:  Clin Cancer Res       Date:  2021-09-27       Impact factor: 13.801

6.  Beyond finding druggable targets and tumor mutational burden: to measure heterogeneity by ctDNA.

Authors:  Zhichao Liu; Jianxing He; Wenhua Liang
Journal:  Ann Transl Med       Date:  2020-06

Review 7.  The Validity and Predictive Value of Blood-Based Biomarkers in Prediction of Response in the Treatment of Metastatic Non-Small Cell Lung Cancer: A Systematic Review.

Authors:  Frederik van Delft; Hendrik Koffijberg; Valesca Retèl; Michel van den Heuvel; Maarten IJzerman
Journal:  Cancers (Basel)       Date:  2020-04-30       Impact factor: 6.639

8.  Tumor Mutational Burden and Efficacy of Immune Checkpoint Inhibitors: A Systematic Review and Meta-Analysis.

Authors:  Jong Yeob Kim; Andreas Kronbichler; Michael Eisenhut; Sung Hwi Hong; Hans J van der Vliet; Jeonghyun Kang; Jae Il Shin; Gabriele Gamerith
Journal:  Cancers (Basel)       Date:  2019-11-15       Impact factor: 6.639

9.  Smoking habit and chemo-radiotherapy and/or surgery affect the sensitivity of EGFR plasma test in non-small cell lung cancer.

Authors:  Vinh Thanh Tran; Thang Thanh Phan; Son Truong Nguyen; Bich-Thu Tran; Toan Trong Ho; Suong Phuoc Pho; Tran Bao Nguyen; Tuyen Thi Bich Pham; Anh Tuan Le; Vu Thuong Le; Hang Thuy Nguyen
Journal:  BMC Res Notes       Date:  2020-08-03

10.  The Predictive Value of Tumor Mutation Burden on Efficacy of Immune Checkpoint Inhibitors in Cancers: A Systematic Review and Meta-Analysis.

Authors:  Yongfeng Wu; Jinming Xu; Chengli Du; Yihua Wu; Dajing Xia; Wang Lv; Jian Hu
Journal:  Front Oncol       Date:  2019-11-05       Impact factor: 6.244

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