Literature DB >> 30840728

Prostate cancer detection from multi-institution multiparametric MRIs using deep convolutional neural networks.

Yohan Sumathipala1, Nathan Lay1, Baris Turkbey2, Clayton Smith2, Peter L Choyke2, Ronald M Summers1.   

Abstract

Multiparametric magnetic resonance imaging (mpMRI) of the prostate aids in early diagnosis of prostate cancer, but is difficult to interpret and subject to interreader variability. Our objective is to generate probability maps, overlaid on original mpMRI images to help radiologists identify where a cancer is suspected as a computer-aided diagnostic (CAD). We optimized the holistically nested edge detection (HED) deep convolutional neural network. Our dataset contains T2, apparent diffusion coefficient, and high b -value images from 186 patients across six institutions worldwide: 92 with an endorectal coil (ERC) and 94 without. Ground-truth was based on tumor segmentations manually drawn by expert radiologists based on histologic evidence of cancer. The training set consisted of 120 patients and the validation set and test set included 19 and 47, respectively. Slice-level probability maps are evaluated at the lesion level of analysis. The best model: HED using 5 × 5 convolutional kernels, batch normalization, and optimized using Adam. This CAD performed significantly better ( p < 0.001 ) in the peripheral zone ( AUC = 0.94 ± 0.01 ) than the transition zone. It outperforms a previous CAD from our group in a head-to-head comparison on the same ERC-only test cases ( AUC = 0.97 ± 0.01 ; p < 0.001 ). Our CAD establishes a state-of-the-art performance for predicting prostate cancer lesions on mpMRIs.

Entities:  

Keywords:  computer-aided diagnosis; deep learning; image processing; magnetic resonance imaging; neural networks; prostate cancer

Year:  2018        PMID: 30840728      PMCID: PMC6294844          DOI: 10.1117/1.JMI.5.4.044507

Source DB:  PubMed          Journal:  J Med Imaging (Bellingham)        ISSN: 2329-4302


  38 in total

1.  CT colonography with computer-aided detection as a second reader: observer performance study.

Authors:  Nicholas Petrick; Maruf Haider; Ronald M Summers; Srinath C Yeshwant; Linda Brown; Edward M Iuliano; Adeline Louie; J Richard Choi; Perry J Pickhardt
Journal:  Radiology       Date:  2008-01       Impact factor: 11.105

2.  Evaluation of prostate segmentation algorithms for MRI: the PROMISE12 challenge.

Authors:  Geert Litjens; Robert Toth; Wendy van de Ven; Caroline Hoeks; Sjoerd Kerkstra; Bram van Ginneken; Graham Vincent; Gwenael Guillard; Neil Birbeck; Jindang Zhang; Robin Strand; Filip Malmberg; Yangming Ou; Christos Davatzikos; Matthias Kirschner; Florian Jung; Jing Yuan; Wu Qiu; Qinquan Gao; Philip Eddie Edwards; Bianca Maan; Ferdinand van der Heijden; Soumya Ghose; Jhimli Mitra; Jason Dowling; Dean Barratt; Henkjan Huisman; Anant Madabhushi
Journal:  Med Image Anal       Date:  2013-12-25       Impact factor: 8.545

3.  Potential of computer-aided diagnosis to reduce variability in radiologists' interpretations of mammograms depicting microcalcifications.

Authors:  Y Jiang; R M Nishikawa; R A Schmidt; A Y Toledano; K Doi
Journal:  Radiology       Date:  2001-09       Impact factor: 11.105

4.  Automated detection of prostatic adenocarcinoma from high-resolution ex vivo MRI.

Authors:  Anant Madabhushi; Michael D Feldman; Dimitris N Metaxas; John Tomaszeweski; Deborah Chute
Journal:  IEEE Trans Med Imaging       Date:  2005-12       Impact factor: 10.048

5.  Cancer genetics-guided discovery of serum biomarker signatures for diagnosis and prognosis of prostate cancer.

Authors:  Igor Cima; Ralph Schiess; Peter Wild; Martin Kaelin; Peter Schüffler; Vinzenz Lange; Paola Picotti; Reto Ossola; Arnoud Templeton; Olga Schubert; Thomas Fuchs; Thomas Leippold; Stephen Wyler; Jens Zehetner; Wolfram Jochum; Joachim Buhmann; Thomas Cerny; Holger Moch; Silke Gillessen; Ruedi Aebersold; Wilhelm Krek
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-07       Impact factor: 11.205

6.  Lead time and overdiagnosis in prostate-specific antigen screening: importance of methods and context.

Authors:  Gerrit Draisma; Ruth Etzioni; Alex Tsodikov; Angela Mariotto; Elisabeth Wever; Roman Gulati; Eric Feuer; Harry de Koning
Journal:  J Natl Cancer Inst       Date:  2009-03-10       Impact factor: 13.506

7.  Under diagnosis and over diagnosis of prostate cancer.

Authors:  Theresa Graif; Stacy Loeb; Kimberly A Roehl; Sara N Gashti; Christopher Griffin; Xiaoying Yu; William J Catalona
Journal:  J Urol       Date:  2007-05-11       Impact factor: 7.450

8.  Comparison of endorectal coil and nonendorectal coil T2W and diffusion-weighted MRI at 3 Tesla for localizing prostate cancer: correlation with whole-mount histopathology.

Authors:  Baris Turkbey; Maria J Merino; Elma Carvajal Gallardo; Vijay Shah; Omer Aras; Marcelino Bernardo; Esther Mena; Dagane Daar; Ardeshir R Rastinehad; W Marston Linehan; Bradford J Wood; Peter A Pinto; Peter L Choyke
Journal:  J Magn Reson Imaging       Date:  2013-11-15       Impact factor: 4.813

9.  The peripheral zone of the prostate is more prone to tumor development than the transitional zone: is the ETS family the key?

Authors:  David Adler; Andreas Lindstrot; Jörg Ellinger; Sebastian Rogenhofer; Reinhard Buettner; Sven Perner; Nicolas Wernert
Journal:  Mol Med Rep       Date:  2011-10-27       Impact factor: 2.952

10.  Interpreting scan data acquired from multiple scanners: a study with Alzheimer's disease.

Authors:  Cynthia M Stonnington; Geoffrey Tan; Stefan Klöppel; Carlton Chu; Bogdan Draganski; Clifford R Jack; Kewei Chen; John Ashburner; Richard S J Frackowiak
Journal:  Neuroimage       Date:  2007-10-13       Impact factor: 6.556

View more
  13 in total

Review 1.  Artificial intelligence at the intersection of pathology and radiology in prostate cancer.

Authors:  Stephnie A Harmon; Sena Tuncer; Thomas Sanford; Peter L Choyke; Barış Türkbey
Journal:  Diagn Interv Radiol       Date:  2019-05       Impact factor: 2.630

2.  Artificial Intelligence Assessment of Renal Scarring (AIRS Study).

Authors:  Chanon Chantaduly; Hayden R Troutt; Karla A Perez Reyes; Jonathan E Zuckerman; Peter D Chang; Wei Ling Lau
Journal:  Kidney360       Date:  2021-11-11

3.  Selective identification and localization of indolent and aggressive prostate cancers via CorrSigNIA: an MRI-pathology correlation and deep learning framework.

Authors:  Indrani Bhattacharya; Arun Seetharaman; Christian Kunder; Wei Shao; Leo C Chen; Simon J C Soerensen; Jeffrey B Wang; Nikola C Teslovich; Richard E Fan; Pejman Ghanouni; James D Brooks; Geoffrey A Sonn; Mirabela Rusu
Journal:  Med Image Anal       Date:  2021-11-06       Impact factor: 8.545

4.  Performance of Deep Learning and Genitourinary Radiologists in Detection of Prostate Cancer Using 3-T Multiparametric Magnetic Resonance Imaging.

Authors:  Ruiming Cao; Xinran Zhong; Sohrab Afshari; Ely Felker; Voraparee Suvannarerg; Teeravut Tubtawee; Sitaram Vangala; Fabien Scalzo; Steven Raman; Kyunghyun Sung
Journal:  J Magn Reson Imaging       Date:  2021-03-12       Impact factor: 4.813

5.  Deep Learning Reconstruction Enables Highly Accelerated Biparametric MR Imaging of the Prostate.

Authors:  Patricia M Johnson; Angela Tong; Awani Donthireddy; Kira Melamud; Robert Petrocelli; Paul Smereka; Kun Qian; Mahesh B Keerthivasan; Hersh Chandarana; Florian Knoll
Journal:  J Magn Reson Imaging       Date:  2021-12-07       Impact factor: 5.119

Review 6.  Applications of Artificial Intelligence to Prostate Multiparametric MRI (mpMRI): Current and Emerging Trends.

Authors:  Michelle D Bardis; Roozbeh Houshyar; Peter D Chang; Alexander Ushinsky; Justin Glavis-Bloom; Chantal Chahine; Thanh-Lan Bui; Mark Rupasinghe; Christopher G Filippi; Daniel S Chow
Journal:  Cancers (Basel)       Date:  2020-05-11       Impact factor: 6.639

7.  Registration of presurgical MRI and histopathology images from radical prostatectomy via RAPSODI.

Authors:  Mirabela Rusu; Wei Shao; Christian A Kunder; Jeffrey B Wang; Simon J C Soerensen; Nikola C Teslovich; Rewa R Sood; Leo C Chen; Richard E Fan; Pejman Ghanouni; James D Brooks; Geoffrey A Sonn
Journal:  Med Phys       Date:  2020-07-18       Impact factor: 4.071

8.  ProsRegNet: A deep learning framework for registration of MRI and histopathology images of the prostate.

Authors:  Wei Shao; Linda Banh; Christian A Kunder; Richard E Fan; Simon J C Soerensen; Jeffrey B Wang; Nikola C Teslovich; Nikhil Madhuripan; Anugayathri Jawahar; Pejman Ghanouni; James D Brooks; Geoffrey A Sonn; Mirabela Rusu
Journal:  Med Image Anal       Date:  2020-12-17       Impact factor: 8.545

Review 9.  Artificial Intelligence Based Algorithms for Prostate Cancer Classification and Detection on Magnetic Resonance Imaging: A Narrative Review.

Authors:  Jasper J Twilt; Kicky G van Leeuwen; Henkjan J Huisman; Jurgen J Fütterer; Maarten de Rooij
Journal:  Diagnostics (Basel)       Date:  2021-05-26

10.  A New Framework for Precise Identification of Prostatic Adenocarcinoma.

Authors:  Sarah M Ayyad; Mohamed A Badawy; Mohamed Shehata; Ahmed Alksas; Ali Mahmoud; Mohamed Abou El-Ghar; Mohammed Ghazal; Moumen El-Melegy; Nahla B Abdel-Hamid; Labib M Labib; H Arafat Ali; Ayman El-Baz
Journal:  Sensors (Basel)       Date:  2022-02-26       Impact factor: 3.576

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.