Literature DB >> 16350920

Automated detection of prostatic adenocarcinoma from high-resolution ex vivo MRI.

Anant Madabhushi1, Michael D Feldman, Dimitris N Metaxas, John Tomaszeweski, Deborah Chute.   

Abstract

Prostatic adenocarcinoma is the most commonly occurring cancer among men in the United States, second only to skin cancer. Currently, the only definitive method to ascertain the presence of prostatic cancer is by trans-rectal ultrasound (TRUS) directed biopsy. Owing to the poor image quality of ultrasound, the accuracy of TRUS is only 20%-25%. High-resolution magnetic resonance imaging (MRI) has been shown to have a higher accuracy of prostate cancer detection compared to ultrasound. Consequently, several researchers have been exploring the use of high resolution MRI in performing prostate biopsies. Visual detection of prostate cancer, however, continues to be difficult owing to its apparent lack of shape, and the fact that several malignant and benign structures have overlapping intensity and texture characteristics. In this paper, we present a fully automated computer-aided detection (CAD) system for detecting prostatic adenocarcinoma from 4 Tesla ex vivo magnetic resonance (MR) imagery of the prostate. After the acquired MR images have been corrected for background inhomogeneity and nonstandardness, novel three-dimensional (3-D) texture features are extracted from the 3-D MRI scene. A Bayesian classifier then assigns each image voxel a "likelihood" of malignancy for each feature independently. The "likelihood" images generated in this fashion are then combined using an optimally weighted feature combination scheme. Quantitative evaluation was performed by comparing the CAD results with the manually ascertained ground truth for the tumor on the MRI. The tumor labels on the MR slices were determined manually by an expert by visually registering the MR slices with the corresponding regions on the histology slices. We evaluated our CAD system on a total of 33 two-dimensional (2-D) MR slices from five different 3-D MR prostate studies. Five slices from two different glands were used for training. Our feature combination scheme was found to outperform the individual texture features, and also other popularly used feature combination methods, including AdaBoost, ensemble averaging, and majority voting. Further, in several instances our CAD system performed better than the experts in terms of accuracy, the expert segmentations being determined solely from visual inspection of the MRI data. In addition, the intrasystem variability (changes in CAD accuracy with changes in values of system parameters) was significantly lower than the corresponding intraobserver and interobserver variability. CAD performance was found to be very similar for different training sets. Future work will focus on extending the methodology to guide high-resolution MRI-assisted in vivo prostate biopsies.

Entities:  

Mesh:

Year:  2005        PMID: 16350920     DOI: 10.1109/TMI.2005.859208

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  51 in total

1.  Automated computer-derived prostate volumes from MR imaging data: comparison with radiologist-derived MR imaging and pathologic specimen volumes.

Authors:  Julie C Bulman; Robert Toth; Amish D Patel; B Nicolas Bloch; Colm J McMahon; Long Ngo; Anant Madabhushi; Neil M Rofsky
Journal:  Radiology       Date:  2012-01       Impact factor: 11.105

2.  A magnetic resonance spectroscopy driven initialization scheme for active shape model based prostate segmentation.

Authors:  Robert Toth; Pallavi Tiwari; Mark Rosen; Galen Reed; John Kurhanewicz; Arjun Kalyanpur; Sona Pungavkar; Anant Madabhushi
Journal:  Med Image Anal       Date:  2010-10-28       Impact factor: 8.545

3.  Textural kinetics: a novel dynamic contrast-enhanced (DCE)-MRI feature for breast lesion classification.

Authors:  Shannon C Agner; Salil Soman; Edward Libfeld; Margie McDonald; Kathleen Thomas; Sarah Englander; Mark A Rosen; Deanna Chin; John Nosher; Anant Madabhushi
Journal:  J Digit Imaging       Date:  2011-06       Impact factor: 4.056

4.  Simultaneous Segmentation of Prostatic Zones Using Active Appearance Models With Multiple Coupled Levelsets.

Authors:  Robert Toth; Justin Ribault; John Gentile; Dan Sperling; Anant Madabhushi
Journal:  Comput Vis Image Underst       Date:  2013-09-01       Impact factor: 3.876

5.  Semi supervised multi kernel (SeSMiK) graph embedding: identifying aggressive prostate cancer via magnetic resonance imaging and spectroscopy.

Authors:  Pallavi Tiwari; John Kurhanewicz; Mark Rosen; Anant Madabhushi
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

6.  A hierarchical spectral clustering and nonlinear dimensionality reduction scheme for detection of prostate cancer from magnetic resonance spectroscopy (MRS).

Authors:  Pallavi Tiwari; Mark Rosen; Anant Madabhushi
Journal:  Med Phys       Date:  2009-09       Impact factor: 4.071

7.  A method for correlating in vivo prostate magnetic resonance imaging and histopathology using individualized magnetic resonance-based molds.

Authors:  Vijay Shah; Thomas Pohida; Baris Turkbey; Haresh Mani; Maria Merino; Peter A Pinto; Peter Choyke; Marcelino Bernardo
Journal:  Rev Sci Instrum       Date:  2009-10       Impact factor: 1.523

8.  Elastic registration of multimodal prostate MRI and histology via multiattribute combined mutual information.

Authors:  Jonathan Chappelow; B Nicolas Bloch; Neil Rofsky; Elizabeth Genega; Robert Lenkinski; William DeWolf; Anant Madabhushi
Journal:  Med Phys       Date:  2011-04       Impact factor: 4.071

9.  Quantitative Evaluation of Treatment Related Changes on Multi-Parametric MRI after Laser Interstitial Thermal Therapy of Prostate Cancer.

Authors:  Satish Viswanath; Robert Toth; Mirabela Rusu; Dan Sperling; Herbert Lepor; Jurgen Futterer; Anant Madabhushi
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2013-03-15

10.  Automatic classification of prostate cancer Gleason scores from multiparametric magnetic resonance images.

Authors:  Duc Fehr; Harini Veeraraghavan; Andreas Wibmer; Tatsuo Gondo; Kazuhiro Matsumoto; Herbert Alberto Vargas; Evis Sala; Hedvig Hricak; Joseph O Deasy
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-02       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.