Literature DB >> 30700908

Onset of differentiation is post-transcriptionally controlled in adult neural stem cells.

Avni Baser1,2, Maxim Skabkin1, Susanne Kleber1, Yonglong Dang1,2, Gülce S Gülcüler Balta1,2, Georgios Kalamakis1,2, Manuel Göpferich1,2, Damian Carvajal Ibañez1,2, Roman Schefzik3, Alejandro Santos Lopez1, Enric Llorens Bobadilla1,2, Carsten Schultz4,5, Bernd Fischer3, Ana Martin-Villalba6.   

Abstract

Whether post-transcriptional regulation of gene expression controls differentiation of stem cells for tissue renewal remains unknown. Quiescent stem cells exhibit a low level of protein synthesis1, which is key to maintaining the pool of fully functional stem cells, not only in the brain but also in the bone marrow and hair follicles2-6. Neurons also maintain a subset of messenger RNAs in a translationally silent state, which react 'on demand' to intracellular and extracellular signals. This uncoupling of general availability of mRNA from translation into protein facilitates immediate responses to environmental changes and avoids excess production of proteins, which is the most energy-consuming process within the cell. However, when post-transcriptional regulation is acquired and how protein synthesis changes along the different steps of maturation are not known. Here we show that protein synthesis undergoes highly dynamic changes when stem cells differentiate to neurons in vivo. Examination of individual transcripts using RiboTag mouse models reveals that whereas stem cells translate abundant transcripts with little discrimination, translation becomes increasingly regulated with the onset of differentiation. The generation of neurogenic progeny involves translational repression of a subset of mRNAs, including mRNAs that encode the stem cell identity factors SOX2 and PAX6, and components of the translation machinery, which are enriched in a pyrimidine-rich motif. The decrease of mTORC1 activity as stem cells exit the cell cycle selectively blocks translation of these transcripts. Our results reveal a control mechanism by which the cell cycle is coupled to post-transcriptional repression of key stem cell identity factors, thereby promoting exit from stemness.

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Year:  2019        PMID: 30700908     DOI: 10.1038/s41586-019-0888-x

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  37 in total

1.  Imaging protein synthesis in cells and tissues with an alkyne analog of puromycin.

Authors:  Jing Liu; Yangqing Xu; Dan Stoleru; Adrian Salic
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-12       Impact factor: 11.205

2.  Single-Cell Transcriptomics Reveals a Population of Dormant Neural Stem Cells that Become Activated upon Brain Injury.

Authors:  Enric Llorens-Bobadilla; Sheng Zhao; Avni Baser; Gonzalo Saiz-Castro; Klara Zwadlo; Ana Martin-Villalba
Journal:  Cell Stem Cell       Date:  2015-07-30       Impact factor: 24.633

3.  Slowly dividing neural progenitors are an embryonic origin of adult neural stem cells.

Authors:  Shohei Furutachi; Hiroaki Miya; Tomoyuki Watanabe; Hiroki Kawai; Norihiko Yamasaki; Yujin Harada; Itaru Imayoshi; Mark Nelson; Keiichi I Nakayama; Yusuke Hirabayashi; Yukiko Gotoh
Journal:  Nat Neurosci       Date:  2015-03-30       Impact factor: 24.884

4.  In vivo clonal analysis reveals self-renewing and multipotent adult neural stem cell characteristics.

Authors:  Michael A Bonaguidi; Michael A Wheeler; Jason S Shapiro; Ryan P Stadel; Gerald J Sun; Guo-li Ming; Hongjun Song
Journal:  Cell       Date:  2011-06-16       Impact factor: 41.582

5.  Cell-type-specific isolation of ribosome-associated mRNA from complex tissues.

Authors:  Elisenda Sanz; Linghai Yang; Thomas Su; David R Morris; G Stanley McKnight; Paul S Amieux
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-04       Impact factor: 11.205

6.  Embryonic Origin of Postnatal Neural Stem Cells.

Authors:  Luis C Fuentealba; Santiago B Rompani; Jose I Parraguez; Kirsten Obernier; Ricardo Romero; Constance L Cepko; Arturo Alvarez-Buylla
Journal:  Cell       Date:  2015-06-18       Impact factor: 41.582

7.  Prospective identification and purification of quiescent adult neural stem cells from their in vivo niche.

Authors:  Paolo Codega; Violeta Silva-Vargas; Alex Paul; Angel R Maldonado-Soto; Annina M Deleo; Erika Pastrana; Fiona Doetsch
Journal:  Neuron       Date:  2014-05-07       Impact factor: 17.173

8.  Haematopoietic stem cells require a highly regulated protein synthesis rate.

Authors:  Robert A J Signer; Jeffrey A Magee; Adrian Salic; Sean J Morrison
Journal:  Nature       Date:  2014-03-09       Impact factor: 49.962

9.  Stem cell function and stress response are controlled by protein synthesis.

Authors:  Sandra Blanco; Roberto Bandiera; Martyna Popis; Shobbir Hussain; Patrick Lombard; Jelena Aleksic; Abdulrahim Sajini; Hinal Tanna; Rosana Cortés-Garrido; Nikoletta Gkatza; Sabine Dietmann; Michaela Frye
Journal:  Nature       Date:  2016-06-16       Impact factor: 49.962

10.  RiboTag analysis of actively translated mRNAs in Sertoli and Leydig cells in vivo.

Authors:  Elisenda Sanz; Ryan Evanoff; Albert Quintana; Elizabeth Evans; Jeremy A Miller; Chemyong Ko; Paul S Amieux; Michael D Griswold; G Stanley McKnight
Journal:  PLoS One       Date:  2013-06-11       Impact factor: 3.240

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  35 in total

Review 1.  Aging and Rejuvenation of Neural Stem Cells and Their Niches.

Authors:  Paloma Navarro Negredo; Robin W Yeo; Anne Brunet
Journal:  Cell Stem Cell       Date:  2020-07-28       Impact factor: 24.633

Review 2.  Reverse engineering human brain evolution using organoid models.

Authors:  Mohammed A Mostajo-Radji; Matthew T Schmitz; Sebastian Torres Montoya; Alex A Pollen
Journal:  Brain Res       Date:  2019-12-03       Impact factor: 3.252

3.  Choroid plexus-derived miR-204 regulates the number of quiescent neural stem cells in the adult brain.

Authors:  Tjasa Lepko; Melanie Pusch; Tamara Müller; Dorothea Schulte; Janina Ehses; Michael Kiebler; Julia Hasler; Hagen B Huttner; Roosmarijn E Vandenbroucke; Charysse Vandendriessche; Miha Modic; Ana Martin-Villalba; Sheng Zhao; Enric LLorens-Bobadilla; Anja Schneider; Andre Fischer; Christopher T Breunig; Stefan H Stricker; Magdalena Götz; Jovica Ninkovic
Journal:  EMBO J       Date:  2019-07-15       Impact factor: 11.598

Review 4.  Recent advances in tissue stem cells.

Authors:  Xin Fu; Qiang He; Yu Tao; Mengdi Wang; Wei Wang; Yalong Wang; Qing Cissy Yu; Fang Zhang; Xiaoyu Zhang; Ye-Guang Chen; Dong Gao; Ping Hu; Lijian Hui; Xiaoqun Wang; Yi Arial Zeng
Journal:  Sci China Life Sci       Date:  2021-11-30       Impact factor: 6.038

5.  Canonical nucleators are dispensable for stress granule assembly in Drosophila intestinal progenitors.

Authors:  Kasun Buddika; Ishara S Ariyapala; Mary A Hazuga; Derek Riffert; Nicholas S Sokol
Journal:  J Cell Sci       Date:  2020-05-18       Impact factor: 5.285

Review 6.  RNA modifications regulating cell fate in cancer.

Authors:  Sylvain Delaunay; Michaela Frye
Journal:  Nat Cell Biol       Date:  2019-05-02       Impact factor: 28.824

Review 7.  Translating neural stem cells to neurons in the mammalian brain.

Authors:  Siraj K Zahr; David R Kaplan; Freda D Miller
Journal:  Cell Death Differ       Date:  2019-09-24       Impact factor: 15.828

8.  Unsupervised machine learning reveals risk stratifying glioblastoma tumor cells.

Authors:  Nalin Leelatian; Justine Sinnaeve; Akshitkumar M Mistry; Sierra M Barone; Asa A Brockman; Kirsten E Diggins; Allison R Greenplate; Kyle D Weaver; Reid C Thompson; Lola B Chambless; Bret C Mobley; Rebecca A Ihrie; Jonathan M Irish
Journal:  Elife       Date:  2020-06-23       Impact factor: 8.140

9.  Non-invasive and high-throughput interrogation of exon-specific isoform expression.

Authors:  Dong-Jiunn Jeffery Truong; Teeradon Phlairaharn; Bianca Eßwein; Christoph Gruber; Deniz Tümen; Enikő Baligács; Niklas Armbrust; Francesco Leandro Vaccaro; Eva-Maria Lederer; Eva Magdalena Beck; Julian Geilenkeuser; Simone Göppert; Luisa Krumwiede; Christian Grätz; Gerald Raffl; Dominic Schwarz; Martin Zirngibl; Milica Živanić; Maren Beyer; Johann Dietmar Körner; Tobias Santl; Valentin Evsyukov; Tabea Strauß; Sigrid C Schwarz; Günter U Höglinger; Peter Heutink; Sebastian Doll; Marcus Conrad; Florian Giesert; Wolfgang Wurst; Gil Gregor Westmeyer
Journal:  Nat Cell Biol       Date:  2021-06-03       Impact factor: 28.824

Review 10.  Translational control of stem cell function.

Authors:  James A Saba; Kifayathullah Liakath-Ali; Rachel Green; Fiona M Watt
Journal:  Nat Rev Mol Cell Biol       Date:  2021-07-16       Impact factor: 94.444

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