| Literature DB >> 30672659 |
Santiago Roura1,2, Francesc Rudilla3,4, Paloma Gastelurrutia1,2, Emma Enrich3,4, Eva Campos3, Josep Lupón2,5,6, Evelyn Santiago-Vacas5, Sergi Querol4,7, Antoni Bayés-Genís1,2,5,6.
Abstract
AIMS: Cell therapy can be used to repair functionally impaired organs and tissues in humans. Although autologous cells have an immunological advantage, it is difficult to obtain high cell numbers for therapy. Well-characterized banks of cells with human leukocyte antigens (HLA) that are representative of a given population are thus needed. The present study investigates the HLA allele and haplotype frequencies in a cohort of heart failure (HF) patients. METHODS ANDEntities:
Keywords: Allele frequency; Allogeneic cell therapy; Haplotype frequency; Heart failure
Mesh:
Substances:
Year: 2019 PMID: 30672659 PMCID: PMC6437550 DOI: 10.1002/ehf2.12406
Source DB: PubMed Journal: ESC Heart Fail ISSN: 2055-5822
Baseline demographic, clinical, and biochemical data of the study participants
|
| |
|---|---|
| Age (years) | 68.7 ± 12.2 |
| Male sex | 209 (84.6%) |
| Aetiology | |
| Ischaemic heart disease | 152 (61.5%) |
| Dilated CM | 42 (17%) |
| Hypertensive CM | 9 (3.6%) |
| Alcoholic CM | 12 (4.9%) |
| Drug‐induced CM | 4 (1.6%) |
| Valvular disease | 13 (5.3) |
| Hypertrophic CM | 5 (2.0%) |
| Other | 10 (4%) |
| HF duration (months) | 60 (14–119) |
| LVEF | 29.5% ± 6.5 |
| NYHA functional class | |
| I | 8 (3.2%) |
| II | 156 (63.2%) |
| III | 81 (32.8%) |
| IV | 2 (0.8%) |
| Co‐morbidities | |
| Hypertension | 182 (73.7%) |
| Diabetes mellitus | 112 (45.3%) |
| COPD | 71 (28.7%) |
| Renal failure | 146 (59.1%) |
| Anaemia | 116 (47%) |
| Atrial fibrillation/flutter | 100 (40.5%) |
| Biochemical | |
| Na | 139 ± 3.9 |
| Haemoglobin | 12.9 ± 1.6 |
| eGFR | 55.5 ± 25.2 |
| NTproBNP | 1673 (702–4115) |
| Treatments | |
| ACEI/ARB | 207 (83.8%) |
| Beta‐blockers | 234 (94.7%) |
| MRA | 171 (69.2%) |
| Loop diuretics | 214 (86.6%) |
| Digoxin | 70 (28.3%) |
| Ivabradine | 38 (15.4%) |
| Statins | 199 (80.6%) |
| ICD | 83 (33.6%) |
| CRT | 51 (20.6%) |
ACEI, angiotensin‐converting enzyme inhibitor; ARB, angiotensin receptor blocker; CM, cardiomyopathy; CRT, cardiac resynchronization therapy; ICD, implantable cardioverter device; LVEF, left ventricular ejection fraction; MRA: mineral corticoid receptor antagonist; NYHA, New York Heart Association.
Data expressed as mean ± standard deviation, median (25th–75th percentiles), or absolute number (percentage).
eGFR (CKD‐EPI) <60 mL/min/1.73 m2.
Hb < 12 g/dL in women and <13 g/dL in men.
Class I allele frequencies in heart failure patients
| HLA‐A |
| AF | HLA‐B |
| AF | HLA‐C |
| AF |
|---|---|---|---|---|---|---|---|---|
|
| 119 | 24.09 |
| 46 | 9.31 |
| 66 | 13.36 |
|
| 66 | 13.36 |
| 37 | 7.49 |
| 64 | 12.96 |
|
| 50 | 10.12 |
| 36 | 7.29 |
| 58 | 11.74 |
|
| 46 | 9.31 |
| 31 | 6.28 |
| 47 | 9.51 |
|
| 35 | 7.09 |
| 31 | 6.28 |
| 38 | 7.69 |
|
| 31 | 6.28 |
| 27 | 5.47 |
| 33 | 6.68 |
|
| 19 | 3.85 |
| 21 | 4.25 |
| 32 | 6.48 |
|
| 15 | 3.04 |
| 18 | 3.64 |
| 24 | 4.86 |
|
| 14 | 2.83 |
| 18 | 3.64 |
| 22 | 4.45 |
|
| 12 | 2.43 |
| 17 | 3.44 |
| 21 | 4.25 |
|
| 10 | 2.02 |
| 16 | 3.24 |
| 17 | 3.44 |
|
| 9 | 1.82 |
| 14 | 2.83 |
| 14 | 2.83 |
|
| 8 | 1.62 |
| 14 | 2.83 |
| 14 | 2.83 |
|
| 8 | 1.62 |
| 13 | 2.63 |
| 9 | 1.82 |
|
| 8 | 1.62 |
| 12 | 2.43 |
| 7 | 1.42 |
|
| 8 | 1.62 |
| 11 | 2.23 |
| 7 | 1.42 |
|
| 7 | 1.42 |
| 10 | 2.02 |
| 6 | 1.21 |
|
| 5 | 1.01 |
| 10 | 2.02 |
| 3 | 0.61 |
|
| 5 | 1.01 |
| 9 | 1.82 |
| 3 | 0.61 |
|
| 4 | 0.81 |
| 7 | 1.42 |
| 3 | 0.61 |
|
| 3 | 0.61 |
| 7 | 1.42 |
| 3 | 0.61 |
|
| 3 | 0.61 |
| 7 | 1.42 |
| 2 | 0.40 |
|
| 2 | 0.40 |
| 6 | 1.21 |
| 1 | 0.20 |
|
| 1 | 0.20 |
| 6 | 1.21 | |||
|
| 1 | 0.20 |
| 6 | 1.21 | |||
|
| 1 | 0.20 |
| 6 | 1.21 | |||
|
| 1 | 0.20 |
| 5 | 1.01 | |||
|
| 1 | 0.20 |
| 4 | 0.81 | |||
|
| 1 | 0.20 |
| 4 | 0.81 | |||
|
| 1 | 0.20 |
| 4 | 0.81 | |||
|
| 4 | 0.81 | ||||||
|
| 3 | 0.61 | ||||||
|
| 3 | 0.61 | ||||||
|
| 3 | 0.61 | ||||||
|
| 3 | 0.61 | ||||||
|
| 3 | 0.61 | ||||||
|
| 2 | 0.40 | ||||||
|
| 2 | 0.40 | ||||||
| 494 | 100.00 | 494 | 100.00 | |||||
|
| 1 | 0.20 | ||||||
|
| 1 | 0.20 | ||||||
|
| 1 | 0.20 | ||||||
|
| 1 | 0.20 | ||||||
|
| 1 | 0.20 | ||||||
|
| 1 | 0.20 | ||||||
|
| 1 | 0.20 | ||||||
|
| 1 | 0.20 | ||||||
|
| 1 | 0.20 | ||||||
|
| 1 | 0.20 | ||||||
|
| 1 | 0.20 | ||||||
|
| 1 | 0.20 | ||||||
|
| 1 | 0.20 | ||||||
|
| 1 | 0.20 | ||||||
|
| 1 | 0.20 | ||||||
|
| 1 | 0.20 | ||||||
|
| 1 | 0.20 | ||||||
|
| 1 | 0.20 | ||||||
| 494 | 100.00 |
AF, allelic frequency; N, number of observed alleles.
Class II allele frequencies in heart failure patients
| HLA‐DRB1 |
| AF | HLA‐DQB1 |
| AF |
|---|---|---|---|---|---|
|
| 73 | 14.78 |
| 76 | 15.38 |
|
| 65 | 13.16 |
| 72 | 14.57 |
|
| 40 | 8.10 |
| 66 | 13.36 |
|
| 36 | 7.29 |
| 66 | 13.36 |
|
| 35 | 7.09 |
| 48 | 9.72 |
|
| 27 | 5.47 |
| 38 | 7.69 |
|
| 23 | 4.66 |
| 36 | 7.29 |
|
| 21 | 4.25 |
| 22 | 4.45 |
|
| 17 | 3.44 |
| 15 | 3.04 |
|
| 17 | 3.44 |
| 13 | 2.63 |
|
| 13 | 2.63 |
| 12 | 2.43 |
|
| 11 | 2.23 |
| 9 | 1.82 |
|
| 10 | 2.02 |
| 8 | 1.62 |
|
| 10 | 2.02 |
| 7 | 1.42 |
|
| 10 | 2.02 |
| 6 | 1.21 |
|
| 10 | 2.02 | |||
|
| 9 | 1.82 | |||
|
| 9 | 1.82 | |||
|
| 8 | 1.62 | |||
|
| 7 | 1.42 | |||
|
| 6 | 1.21 | |||
|
| 6 | 1.21 | |||
|
| 5 | 1.01 | |||
|
| 5 | 1.01 | |||
|
| 5 | 1.01 | |||
|
| 4 | 0.81 | |||
|
| 2 | 0.40 | |||
|
| 2 | 0.40 | |||
|
| 1 | 0.20 | |||
|
| 1 | 0.20 | |||
|
| 1 | 0.20 | |||
|
| 1 | 0.20 | |||
|
| 1 | 0.20 | |||
|
| 1 | 0.20 | |||
|
| 1 | 0.20 | |||
|
| 1 | 0.20 | |||
| 494 | 100.00 | 494 | 100.00 |
AF, allele frequency; N, number of observed alleles.
The most frequent haplotypes in heart failure patients
| ID | Haplotypes |
| HF | PHF |
|---|---|---|---|---|
| 1 |
| 15 | 3.04 | 6.07 |
| 2 |
| 11 | 2.23 | 4.45 |
| 3 |
| 10 | 2.02 | 4.05 |
| 4 |
| 7 | 1.42 | 2.83 |
| 5 |
| 6 | 1.21 | 2.43 |
| 6 |
| 6 | 1.21 | 2.43 |
| 7 |
| 5 | 1.01 | 2.02 |
| 8 |
| 5 | 1.01 | 2.02 |
| 9 |
| 4 | 0.81 | 1.62 |
| 10 |
| 4 | 0.81 | 1.62 |
| 11 |
| 4 | 0.81 | 1.62 |
| 31.17 |
HF, haplotype frequency; ID, identification; N, number of observed haplotypes; PHF, population haplotype frequency.
Figure 1The 11 most frequent haplotypes are present in the 31.17% of the patients of our cohort. Each column represents the accumulated percentage of individuals that have each haplotype (referenced in Table 4 as ID) and its previous ones.