| Literature DB >> 30670070 |
Anette Hall1, Timo Pekkala1, Tuomo Polvikoski2, Mark van Gils3, Miia Kivipelto1,4,5,6, Jyrki Lötjönen7, Jussi Mattila7, Mia Kero8, Liisa Myllykangas8, Mira Mäkelä8, Minna Oinas8,9, Anders Paetau8, Hilkka Soininen1, Maarit Tanskanen8, Alina Solomon10,11.
Abstract
BACKGROUND: We developed multifactorial models for predicting incident dementia and brain pathology in the oldest old using the Vantaa 85+ cohort.Entities:
Keywords: Dementia; Neuropathology; Oldest old; Prediction; Supervised machine learning
Mesh:
Substances:
Year: 2019 PMID: 30670070 PMCID: PMC6343349 DOI: 10.1186/s13195-018-0450-3
Source DB: PubMed Journal: Alzheimers Res Ther Impact factor: 6.982
Fig. 1Study design flowchart
Baseline characteristics of the dementia prediction population
| Characteristics | No dementia at death ( | Dementia at death ( | |
|---|---|---|---|
| Follow-up time, years | 5.4 (2.7) | 5.8 (2.6) | 0.3 |
| Sociodemographics | |||
| Age at baseline, years | 88.4 (2.6) | 88.3 (2.6) | 0.7 |
| Men, | 33 (22%) | 19 (20%) | 0.6 |
| Education, years | 4.6 (3.3) | 3.7 (2.0) | 0.01 |
| Social class | 6.0 (1.5) | 6.2 (1.3) | 0.2 |
| Cognition | |||
| MMSE Total | 25.3 (3.3) | 22.2 (4.5) | < 0.001 |
| MMSE Calculation | 3.4 (1.6) | 2.9 (1.6) | 0.02 |
| MMSE Orientation | 9.5 (0.8) | 8.7 (1.6) | < 0.001 |
| MMSE Other tasks | 7.4 (1.2) | 6.7 (1.4) | < 0.001 |
| MMSE Wordlist | 5.0 (1.1) | 4.2 (1.3) | < 0.001 |
| SPMSQ | 0.8 (1.4) | 1.8 (1.9) | < 0.001 |
| Functioning | |||
| Competence in daily activities | 2.6 (1.3) | 3.2 (1.4) | 0.001 |
| ADL sum (ADL + IADL) | 29.7 (10.2) | 31.6 (10.1) | 0.2 |
| Subjective memory decline | 1.7 (0.6) | 1.9 (0.7) | 0.05 |
| | 17 (12%) | 18 (19%) | 0.02 |
| | 1 (1%) | 5 (6%) | |
| | 101 (69%) | 53 (55%) | |
| | 27 (18%) | 18 (19%) | |
| | 0 (0%) | 1 (1%) | |
| Comorbidity, | |||
| Cardiovascular | 114 (77%) | 66 (68%) | 0.1 |
| Cerebrovascular | 22(15%) | 19 (20%) | 0.3 |
| Diabetes | 29 (20%) | 28 (29%) | 0.09 |
| Cholesterol, mmol/L | |||
| Total cholesterol | 5.9 (1.3) | 5.7 (1.1) | 0.2 |
| LDL cholesterol | 4.0 (1.2) | 3.8 (1.0) | 0.2 |
| HDL cholesterol | 1.0 (0.3) | 1.1 (0.3) | 0.2 |
| Blood pressure, mmHg | |||
| Systolic | 161 (25) | 157 (27) | 0.2 |
| Diastolic | 85 (11) | 84 (12) | 0.6 |
| Lifestyle factors | |||
| BMI | 25.4 (4.4) | 24.9 (3.6) | 0.3 |
| No alcohol use, | 99 (67%) | 67 (69%) | 0.8 |
| Nonsmokers, | 144 (97%) | 95 (98%) | 0.7 |
| Depressive symptoms | |||
| Zung Self-Rating Depression Scale | 26.8 (5.8) | 26.7 (5.5) | 1 |
Abbreviations: ADL Activities of daily living, APOE Apolipoprotein E, BMI body mass index, HDL/LDL High-/low-density lipoprotein, IADL Instrumental activities of daily living, MMSE Mini Mental State Examination, SPMSQ Short Portable Mental Status Questionnaire
Values are shown as mean (SD) or number (percent). p Values were calculated with the Mann-Whitney U test or χ2 test for categorical variables. Social class is categorized on a scale from 1 (lowest) to 10 (highest) [13]
Dementia prediction model
| Predictors | AUC [95% CI] | Sensitivity [95% CI] | Specificity [95% CI] |
|---|---|---|---|
| Entire modela | 0.73 [0.68–0.78] | 0.66 [0.63–0.69] | 0.68 [0.66–0.71] |
| Cognitionb | 0.72 [0.66–0.78] | 0.55 [0.51–0.59] | 0.55 [0.52–0.58] |
| MMSE Calculationc | 0.60 [0.53–0.68] | 0.53 [0.49–0.56] | 0.68 [0.66–0.70] |
| MMSE Orientationc | 0.64 [0.58–0.70] | 0.68 [0.65–0.71] | 0.54 [0.51–0.56] |
| MMSE Other tasksc | 0.65 [0.58–0.72] | 0.56 [0.53–0.58] | 0.67 [0.65–0.69] |
| MMSE Wordlistc | 0.68 [0.62–0.75] | 0.77 [0.75–0.80] | 0.57 [0.55–0.60] |
| SPMSQc | 0.71 [0.65–0.77] | 0.67 [0.65–0.70] | 0.64 [0.62–0.67] |
| MMSE totalc | 0.71 [0.64–0.77] | 0.62 [0.59–0.65] | 0.61 [0.58–0.63] |
| Functioningb | 0.61 [0.55–0.67] | 0.62 [0.59–0.65] | 0.61 [0.58–0.63] |
| Competence in daily activitiesc | 0.61 [0.55–0.67] | 0.83 [0.81–0.86] | 0.35 [0.32–0.38] |
| Sociodemographicsb | 0.60 [0.54–0.65] | 0.83 [0.81–0.86] | 0.35 [0.32–0.38] |
| Education, yearsc | 0.60 [0.54–0.65] | 0.66 [0.63–0.69] | 0.68 [0.66–0.71] |
| 0.58 [0.52–0.64] | 0.45 [0.42–0.47] | 0.69 [0.67–0.71] | |
| | 0.56 [0.51–0.61] | 0.25 [0.23–0.27] | 0.88 [0.86–0.89] |
| | 0.57 [0.51–0.63] | 0.45 [0.42–0.47] | 0.69 [0.67–0.71] |
| All genotypesc,d ( | 0.58 [0.51–0.64] | 0.67 [0.64–0.70] | 0.66 [0.63–0.68] |
Abbreviations: APOE Apoliprotein E, MMSE Mini Mental State Examination, SPMSQ Short Portable Mental Status Questionnaire
AUC, sensitivity and specificity [95% CI] values using the cutoff point Disease State Index (DSI) = 0.5 are shown for 10 × 10-fold cross-validation of the DSI model. Numbers of participants with missing data were 3 for education and 3 for APOE genotype
aOverall model performance
bOverall performance of each group of related predictors
cPerformance of each individual predictor
dCategorical variable including genotype ε2ε3, ε2ε4, ε3ε3, ε3ε4, or ε4ε4
Neuropathology prediction models
| Neuropathological outcomes | Predictors | AUC [95%CI] | Description of predictors by neuropathological outcome categories | |
|---|---|---|---|---|
|
|
| |||
| β-Amyloid load | Overall modela | 0.66 [0.56 - 0.77] | N=37 (23%) | N=126 (77%) |
| APOE genotypeb | 0.63 [0.56 - 0.71] | |||
|
| 0.57 [0.50 - 0.64] | 10 (27%) | 16 (13%) | |
|
| 0.60 [0.55 - 0.65] | 2 (5%) | 31 (25%) | |
| All genotypes ( | 0.62 [0.54 - 0.70] | 9/1/26/1/0 | 13/3/78/28/0 | |
| Functioningb | 0.61 [0.51 - 0.70] | |||
| Competence in Daily Activitiesc | 0.61 [0.51 - 0.70] | 2.7 (1.4) | 3.2 (1.4) | |
| Tangle count | Overall modela | 0.64 [0.55 - 0.73] | N=64 (39%) | N=99 (61%) |
| APOE genotypeb | 0.60 [0.54 - 0.67] | |||
|
| 0.61 [0.55 - 0.67] | 5 (8%) | 28 (29%) | |
|
| 0.59 [0.52 - 0.66] | 48 (75%) | 56 (58%) | |
| All genotypes ( | 0.55 [0.48 - 0.62] | 10/1/48/4/0 | 12/3/56/25/0 | |
| Cholesterolb | 0.60 [0.51 - 0.70] | |||
| Totalc | 0.61 [0.51 - 0.70] | 5.6 (1.4) | 5.9 (1.2) | |
| LDLc | 0.60 [0.50 - 0.69] | 3.6 (1.1) | 3.9 (1.0) | |
| Functioningb | 0.59 [0.50 - 0.67] | |||
| Subjective memory declinec | 0.59 [0.50 - 0.67] | 1.7 (0.6) | 1.9 (0.7) | |
| Neuropathological AD | Overall modela | 0.68 [0.61 - 0.76] | N=86 (53%) | N=77 (47%) |
| APOE genotypeb | 0.65 [0.59 - 0.71] | |||
|
| 0.57 [0.51 - 0.62] | 19 (23%) | 7 (9%) | |
|
| 0.62 [0.57 - 0.67] | 8 (10%) | 25 (33%) | |
| All genotypes ( | 0.64 [0.58 - 0.70] | 17/2/59/6/0 | 5/2/45/23/0 | |
| Sociodemographicsb | 0.62 [0.53 - 0.70] | |||
| Social classc | 0.62 [0.53 - 0.70] | 6.4 (1.5) | 5.9 (1.2) | |
| Functioningb | 0.58 [0.50 - 0.66] | |||
| Subjective memory declinec | 0.58 [0.50 - 0.66] | 1.7 (0.6) | 1.9 (0.7) | |
| Cerebral amyloid angiopathy | Overall modela | 0.66 [0.58 - 0.74] | N=56 (35%) | N=103 (65%) |
| APOE genotypeb | 0.62 [0.55 - 0.69] | |||
|
| 0.63 [0.58 - 0.68] | 2 (4%) | 30 (30%) | |
|
| 0.59 [0.52 - 0.67] | 43 (78%) | 59 (59%) | |
| All genotypes ( | 0.61 [0.55 - 0.68] | 10/1/43/1/0 | 11/3/59/27/0 | |
| Comorbidityb | 0.59 [0.52 - 0.65] | |||
| Cardiovascularc | 0.59 [0.52 - 0.65] | 48 (86%) | 70 (68%) | |
| Sociodemographics | 0.58 [0.53 - 0.64] | |||
| Gender, menc | 0.58 [0.53 - 0.64] | 5 (9%) | 26 (25%) | |
| Cerebral macroinfarcts | Overall modela | 0.72 [0.64 - 0.79] | N=83 (51%) | N=80 (49%) |
| Comorbidityb | 0.64 [0.58 - 0.70] | |||
| Cerebrovascularc | 0.64 [0.58 - 0.70] | 4 (5%) | 26 (33%) | |
| Cognitionb | 0.63 [0.54 - 0.72] | |||
| MMSE Wordlistc | 0.63 [0.55 - 0.71] | 4.6 (1.3) | 4.0 (1.3) | |
| MMSE Totalc | 0.62 [0.52 - 0.71] | 23.8 (4.6) | 22.0 (4.5) | |
| Lifestyleb | 0.62 [0.53 - 0.70] | |||
| BMIc | 0.62 [0.53 - 0.70] | 23.9 (4.1) | 25.5 (4.2) | |
| Functioningb | 0.59 [0.51 - 0.66] | |||
| Competence in Daily Activitiesc | 0.59 [0.51 - 0.66] | 2.9 (1.4) | 3.3 (1.3) | |
| Cortical macroinfarcts | Overall modela | 0.71 [0.63 - 0.79] | N=116 (71%) | N=47 (29%) |
| Comorbidityb | 0.64 [0.57 - 0.71] | |||
| Cerebrovascularc | 0.64 [0.57 - 0.71] | 12 (10%) | 18 (38%) | |
| APOE genotypeb | 0.60 [0.51 - 0.69] | |||
|
| 0.58 [0.51 - 0.65] | 18 (16%) | 15 (33%) | |
|
| 0.59 [0.50 - 0.68] | 80 (71%) | 24 (52%) | |
| White matter macroinfarcts | Overall modela | 0.76 [0.65 - 0.87] | N=140 (86%) | N=23 (14%) |
| Cholesterolb | 0.72 [0.60 - 0.83] | |||
| HDLc | 0.68 [0.58 - 0.79] | 1.0 (0.3) | 0.9 (0.3) | |
| LDLc | 0.70 [0.58 - 0.83] | 3.9 (1.0) | 3.2 (1.0) | |
| Comorbidityb | 0.62 [0.51 - 0.73] | |||
| Cerebrovascularc | 0.62 [0.51 - 0.73] | 21 (15%) | 9 (39%) | |
| APOE genotypeb | 0.61 [0.50 - 0.71] | |||
|
| 0.61 [0.50 - 0.71] | 18 (13%) | 8 (35%) | |
| Cerebral microinfarcts | Overall modela | 0.61 [0.51 - 0.71] | N=130 (83%) | N=26 (17%) |
| Education yearsc | 0.61 [0.51 - 0.71] | 4.5 (2.9) | 3.3 (1.8) | |
| Hippocampal Sclerosis | Overall modela | 0.78 [0.64 - 0.91] | N=151 (93%) | N=11 (7%) |
| Cognitionb | 0.75 [0.59 - 0.92] | |||
| MMSE Wordlistc | 0.68 [0.54 - 0.83] | 4.4 (1.3) | 3.6 (0.9) | |
| MMSE Other tasksc | 0.74 [0.57 - 0.90] | 6.9 (1.5) | 5.8 (1.4) | |
| MMSE Totalc | 0.72 [0.55 - 0.90] | 23.1 (4.6) | 22.3 (4.1) | |
| Lifestyleb | 0.57 [0.42 - 0.71] | |||
| Current smokingc | 0.57 [0.42 - 0.71] | 4 (3%) | 2 (18%) | |
| TDP-43 | Overall modela | 0.69 [0.56 - 0.81] | N=139 (86%) | N=21 (13%) |
| Zung depression scalec | 0.69 [0.56 - 0.81] | 27.5 (5.8) | 23.7 (2.8) | |
Abbreviations: AD Alzheimer’s Disease, APOE Apolipoprotein E, BMI body mass index, HDL/LDL High/low density lipoprotein, MMSE Mini-Mental State Examination, SPMSQ Short portable mental status questionnaire, TDP-43 TAR DNA-binding protein 43.
AUC [95% CI] values are shown for 10*10-fold cross-validation of the DSI model. In the “Description of predictors…” columns, values are shown as mean (standard deviation) or number (percentage). Number of participants with missing data was 4 for cerebral amyloid angiopathy, 4 for cerebral microinfarcts, , 4 for APOE genotype, 5 for MMSE, 6 for subjective memory, 3 for education, 1 for social class, 1 for smoking, 3 for Zung scale, 10 for cholesterol, and 39 for BMI.
aOverall model performance for each neuropathological outcome
bOverall performance of each group of related predictors.
cPerformance of each individual predictor
dCategorical variable including genotype ε2ε3, ε2ε4, ε3ε3, ε3ε4 or ε4ε4
Fig. 2Impact of apolipoprotein E (APOE) genotype on dementia versus neuropathology. Red indicates alleles that predicted dementia/pathology. Blue indicates alleles that were protective against dementia/pathology. White indicates alleles with no significant impact