| Literature DB >> 30591861 |
Delong Chen1,2, Haibin Wang2,3,4, Meng Zhang1,2, Shan Jiang1,2, Chi Zhou2,3, Bin Fang2,3,4, Peng Chen2,3,4.
Abstract
BACKGROUND: Numerous studies have reported the relationship between Long non-coding RNAs (LncRNAs) expression and prognosis of osteosarcoma, but less consensus has been reached. Our meta-analysis was conducted to quantitatively assess the relationship between the expression of LncRNAs, prognosis and clinical pathology in osteosarcoma development.Entities:
Keywords: LncRNAs; Meta-analysis; Osteosarcoma; Prognosis
Year: 2018 PMID: 30591861 PMCID: PMC6303364 DOI: 10.1016/j.jbo.2018.09.005
Source DB: PubMed Journal: J Bone Oncol ISSN: 2212-1366 Impact factor: 4.072
Fig. 1Flow diagram of study selection process.
Comparison of p values of relationships between lncRNAs and clinicopathological features in osteosarcoma.
| Author | Year | LncRNAs | Country | Case number | Cut-off | Expression | Gender | Age | Tumor site | Tumor size | Tumor stage | Metastasis | ALP | Chemotherapy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Jiang | 2017 | DANCR | China | 34 | NA | up-regulated | NA | NA | NA | <0.05 | NA | <0.05 | NA | NA |
| Wen | 2017 | UCA1 | China | 151 | NA | up-regulated | 0.572 | 0.199 | 0.804 | 0.907 | 0.001 | 0.007 | NA | NA |
| Cai | 2017 | HNF1A-AS1 | China | 72 | median | up-regulated | 0.215 | 0.534 | 0.143 | 0.311 | 0.019 | 0.009 | 0.128 | 0.031 |
| O'Leary | 2017 | PARTICLE | Germany | 40 | NA | up-regulated | 0.030 | NA | NA | NA | NA | 0.01 | NA | NA |
| Huo | 2017 | MALAT1 | China | 46 | median | up-regulated | 0.759 | 0.473 | NA | 0.008 | 0.058 | 0.000 | NA | NA |
| Li | 2017 | XIST | China | 145 | NA | up-regulated | 0.827 | 0.102 | 0.886 | 0.009 | 0.001 | 0.009 | 0.704 | NA |
| Wang | 2017 | SOX2-OT | China | 138 | median | up-regulated | 0.723 | 0.115 | 0.191 | 0.036 | 0.008 | 0.001 | NA | NA |
| Zhou | 2016 | CCAL | China | 46 | median | up-regulated | 0.555 | 0.200 | 0.502 | 0.134 | 0.017 | 0.006 | NA | NA |
| Peng | 2016 | BANCR | China | 84 | median | up-regulated | 0.509 | 0.505 | 0.814 | 0.008 | 0.004 | 0.020 | 0.366 | NA |
| Ju | 2016 | BCAR4 | China | 168 | median | up-regulated | 0.381 | 0.494 | 0.982 | 0.810 | 0.002 | 0.001 | 0.191 | 0.841 |
| Chen | 2016 | BCAR4 | China | 60 | median | up-regulated | 0.795 | 0.436 | 0.754 | 0.037 | 0.041 | 0.028 | NA | NA |
| Ma | 2016 | TUG1 | China | 76 | fold-change | up-regulated | 0.835 | 0.701 | 0.093 | 0.011 | 0.002 | 0.802 | 0.235 | 0.020 |
| Gao | 2016 | MALAT1 | China | 162 | median | up-regulated | 0.335 | 0.202 | 0.193 | 0.344 | 0.000 | 0.001 | NA | NA |
| Cong | 2016 | TUSC7 | China | 82 | fold-change | dowm-regulated | 0.65 | 0.473 | 0.627 | NA | 0.294 | 0.087 | NA | NA |
| Uzan | 2016 | HULC | Brazil | 33 | ROC | up-regulated | 0.999 | 0.065 | 0.274 | 0.67 | NA | 0.999 | NA | NA |
| Xia | 2016 | 91H | China | 67 | median | up-regulated | 0.497 | 0.927 | 0.114 | <0.001 | 0.015 | 0.936 | NA | 0.023 |
| Li | 2016 | UCA1 | China | 135 | median | up-regulated | 0.573 | 0.339 | 0.512 | 0.005 | <0.001 | 0.002 | NA | NA |
| Tian | 2015 | MEG3 | China | 64 | median | dowm-regulated | 0.614 | 0.302 | 0.281 | 0.076 | 0.006 | 0.011 | NA | NA |
| Li | 2015 | HOTTIP | China | 68 | median | up-regulated | 0.465 | 0.215 | 0.161 | 0.120 | 0.003 | 0.016 | NA | NA |
| Sun | 2015 | HULC | China | 78 | median | up-regulated | 0.492 | 0.352 | 0.624 | 0.496 | 0.003 | 0.005 | NA | NA |
Notes: LncRNA, long non-coding RNA;ALP, alkaline phosphatase;NA, not available.
Characteristics of studies included in this meta-analysis.
| Studies | LncRNAs | Country | Sample Type | Case number (High/Low) | Method | Cut-off | Tumor stage | outcome | HR availability | NOS |
|---|---|---|---|---|---|---|---|---|---|---|
| Jiang 2017 | DANCR | China | Tissue | 34(17/17) | qRT-PCR | NA | NA | OS,DFS | Directly | 7 |
| Wen 2017 | UCA1 | China | Tissue | 151 (75/76) | qRT-PCR | NA | IIA-III | OS,DFS | Directly | 7 |
| Cai 2017 | HNF1A-AS1 | China | Tissue | 72 (36/36) | qRT-PCR | median | IIA-III | OS | Directly | 6 |
| O'Leary 2017 | PARTICLE | Germany | Tissue | 40 (23/17) | qRT-PCR | NA | NA | OS,MFS | Indirectly | 7 |
| Huo 2017 | MALAT1 | China | serum | 46 (18/26) | qRT-PCR | median | I-IV | OS,PFS | Indirectly | 6 |
| Li 2017 | XIST | China | Tissue | 145 (75/70) | qRT-PCR | NA | I-IV | OS | Directly | 7 |
| Wang 2017 | SOX2-OT | China | Tissue | 138 (69/69) | qRT-PCR | median | I-III | OS | Directly | 7 |
| Zhou 2016 | CCAL | China | Tissue | 46 (23/23) | qRT-PCR | median | I-IV | OS | Directly | 7 |
| Peng 2016 | BANCR | China | Tissue | 84 (42/42) | qRT-PCR | median | IIA-III | OS | Directly | 7 |
| Ju 2016 | BCAR4 | China | Tissue | 168 (87/81) | qRT-PCR | median | IIA-III | OS | Directly | 7 |
| Chen 2016 | BCAR4 | China | Tissue | 60 (30/30) | qRT-PCR | median | I-III | OS,RFS | Directly | 7 |
| Ma 2016 | TUG1 | China | Tissue | 76 (41/35) | qRT-PCR | fold-change | I-III | OS,PFS | Directly | 8 |
| Gao 2016 | MALAT1 | China | Tissue | 162 (80/82) | qRT-PCR | median | IIA-III | OS | Directly | 7 |
| Cong 2016 | TUSC7 | China | Tissue | 82 (13/69) | qRT-PCR | fold-change | early-advanced | OS | Directly | 7 |
| Uzan 2016 | HULC | Brazil | Tissue | 33 (12/21) | qRT-PCR | ROC | NA | OS,EFS | Indirectly | 8 |
| Xia 2016 | 91H | China | serum | 67 (34/33) | qRT-PCR | median | I-III | OS | Directly | 8 |
| Li 2016 | UCA1 | China | Tissue | 135 (68/67) | qRT-PCR | median | I-III | OS | Directly | 7 |
| Tian 2015 | MEG3 | China | Tissue | 64 (32/32) | qRT-PCR | median | I-III | OS | Directly | 7 |
| Li 2015 | HOTTIP | China | Tissue | 68 (34/34) | qRT-PCR | median | IIA-III | OS | Directly | 7 |
| Sun 2015 | HULC | China | Tissue | 78 (39/39) | qRT-PCR | median | IIA-III | OS | Directly | 7 |
Notes: LncRNA, long non-coding RNA; qRT-PCR, quantities reverse transcription polymerase chain reaction; OS, overall survival; DFS, disease free survival; MFS, metastasis free survival; PFS, progression free survival; RFS, recurrence free survival; EFS, event free survival; HR, hazard ratio; NA, not available.
Fig. 2Forest plot for the association between LncRNA expression levels with overall survival and disease-free survival in osteosarcoma.
General and subgroup analysis of the correlation between LncRNAs expression and overall survival.
| Categories | No. of studies | No. of patients | HR(95%CI)for OS | Meta-regression | Heterogeneity | |
|---|---|---|---|---|---|---|
| I-squared(%) | Chi-squared(P) | |||||
| OS | 20 | 1749 | 2.16 (1.68–2.79) | 54% | 0.0003 | |
| Race | 0.294 | |||||
| Asian | 18 | 1676 | 2.15 (1.63–2.82) | 58% | 0.001 | |
| Not Asian | 2 | 73 | 2.42 (1.25–4.7) | 0% | 0.53 | |
| No. of patients | 0.121 | |||||
| ≥100 | 6 | 899 | 2.41 (1.78–3.27) | 4% | 0.39 | |
| <100 | 14 | 777 | 1.95 (1.4–2.73) | 62% | 0.001 | |
| HR availability | 0.957 | |||||
| Directly | 17 | 1630 | 2.23 (1.67–2.99) | 54% | 0.004 | |
| Indirectly | 3 | 119 | 1.66 (1.16–2.37) | 13% | 0.31 | |
| Cut-off values | 0.08 | |||||
| Median | 13 | 1188 | 2.11 (1.75–2.53) | 3% | 0.41 | |
| Fold-change | 2 | 158 | 0.97 (0.11–8.24) | 90% | 0.002 | |
| Others | 5 | 403 | 1.77 (0.71–4.4) | 77% | 0.002 | |
| NOS scores | 0.147 | |||||
| >7 | 3 | 176 | 2.92 (1.81–4.72) | 0% | 0.98 | |
| ≤7 | 17 | 1573 | 2.05 (1.54–2.73) | 58% | 0.001 | |
Fig. A.1Forest plot of HRs for subgroup analysis of the correlation between LncRNAs expression and overall survival. (A) Race; (B) Number of patients; (C) HR availability; (D) Cut-off values; (E) NOS scores.
Fig. 3Forest plots of studies evaluating hazard ratios of LncRNA UCAI,BCAR4,HULC and MALAT1 and overall survival of osteosarcoma patients.
Association between overall survival time and clinicopathological features of patients with osteosarcoma.
| clinicopathological Parameters | studies | Univariate analysis | studies | Multivariate analysis | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| pooled HR(95%CI) | P-value | I-squared(%) | Chi-squared(P) | Pooled HR(95%CI) | P-value | I-squared(%) | Chi-squared(P) | |||
| Age(≤ 25 vs. > 25) | 6 | 1.01(0.78–1.3) | 0.95 | 0% | 0.88 | |||||
| Gender(Female vs. Male) | 11 | 1.15(0.96–1.37) | 0.12 | 0% | 0.97 | |||||
| Tumor site (femur,tibia vs. elsewhere) | 11 | 1.15(0.94–1.4) | 0.17 | 18% | 0.28 | |||||
| ALP | 4 | 2.13(1.58–2.88) | <0.00001 | 22% | 0.28 | |||||
| Chemotherapy(yes vs. no) | 3 | 1.45(0.46–4.63) | 0.53 | 86% | 0.0007 | |||||
| Tumor size(< 8 vs. ≥ 8) | 10 | 1.97(1.55–2.62) | <0.00001 | 0% | 0.64 | 5 | 1.28 (0.88–1.86) | 0.2 | 64% | 0.02 |
| Metastasis(yes vs. no) | 4 | 2.35 (1.69–3.26) | <0.00001 | 0% | 0.98 | 7 | 2.14 (1.15–3.97) | 0.02 | 78% | 0.0002 |
| Distant metastasis(presence vs. absence) | 7 | 5.03(3.78–6.69) | <0.00001 | 0% | 0.85 | 8 | 4.02 (3.05–5.23) | <0.0001 | 0% | 1 |
| Enneking stage(IIA vs. IIB–III) | 6 | 4.01 (3.08–5.23) | <0.00001 | 0% | 0.64 | 7 | 3.2 (2.48–4.14) | <0.0001 | 0% | 0.63 |
| LncRNA expression | 11 | 2.95 (2.37–3.66) | <0.00001 | 0% | 0.93 | 20 | 2.16 (1.68–2.79) | <0.00001 | 54% | 0.002 |
Fig. A.2Forest plot for the association between overall survival time and clinicopathological features of patients with osteosarcoma in univariate analysis. (A) Age (≤ 25 vs. 25); (B) Gender (Female vs. Male); (C) Tumor site (femur,tibia vs elsewhere); (D) ALP; (E) Chemotherapy (yes vs. no); (F) Tumor size (< 8 vs. ≥ 8); (G) Metastasis (yes vs. no); (H) Distant metastasis (presence vs. absence); (I) Enneking stage (IIA vs. IIB-III).
Fig. A.3Forest plot for the association between overall survival time and clinicopathological features of patients with osteosarcoma in multivariate analysis. (A) Tumor size (< 8 vs. ≥ 8) ; (B) Metastasis (yes vs. no); (C) Distant metastasis (presence vs. absence); (D) Enneking stage (IIA vs. IIB–III).
Fig. 4A–B Sensitivity analyses of the studies. (A) Multivariate analysis of overall survival; (B) Univariate analysis of overall survival.
Fig. 5A–D Begg's test for publication bias. (A) Multivariate analysis of overall survival (P = 0.127); (B) Tumor size (P = 1.000); (C) Tumor stage(P = 0.511); (D) Metastasis(P = 0.767).
Fig. 6A–D Egger's test for publication bias. (A) Multivariate analysis of overall survival (P = 0.951); (B) Tumor size(P = 0.631); (C) Tumor stage(P = 0.255); (D) Metastasis(P = 0.438).