Literature DB >> 3050993

Evidence for regulation of reinitiation in translational control of GCN4 mRNA.

A G Hinnebusch1, B M Jackson, P P Mueller.   

Abstract

Translational control of the GCN4 gene of Saccharomyces cerevisiae is mediated by four upstream open reading frames (URFs) present in the leader of GCN4 mRNA. URFs 3 and 4 efficiently repress GCN4 expression in normal growth conditions; URFs 1 and 2 are required to overcome this repression in amino acid-starved cells. lacZ fusions to URFs 3 and 4 were used to determine the translational event that is regulated at these sequences by URFs 1 and 2. URF3-lacZ, URF4-lacZ, and GCN4-lacZ fusions are affected similarly by URFs 1 and 2 when no other URFs are present in the leader: expression from all three fusions is reduced by an amount slightly greater in repressing than in derepressing conditions. These results are inconsistent with models that postulate a differential effect of URFs 1 and 2 on initiation or elongation rates at URFs 3 and 4 versus the GCN4 coding sequences. We propose that the efficiency of reinitiation at the GCN4 AUG codon after translation of URFs 3 and 4 is the translational event that is stimulated in derepressing conditions by URFs 1 and 2.

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Year:  1988        PMID: 3050993      PMCID: PMC282169          DOI: 10.1073/pnas.85.19.7279

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  13 in total

Review 1.  Mechanisms of gene regulation in the general control of amino acid biosynthesis in Saccharomyces cerevisiae.

Authors:  A G Hinnebusch
Journal:  Microbiol Rev       Date:  1988-06

2.  Multiple upstream AUG codons mediate translational control of GCN4.

Authors:  P P Mueller; A G Hinnebusch
Journal:  Cell       Date:  1986-04-25       Impact factor: 41.582

3.  Initiation of translation at internal AUG codons in mammalian cells.

Authors:  C C Liu; C C Simonsen; A D Levinson
Journal:  Nature       Date:  1984 May 3-9       Impact factor: 49.962

4.  Affecting gene expression by altering the length and sequence of the 5' leader.

Authors:  H Johansen; D Schümperli; M Rosenberg
Journal:  Proc Natl Acad Sci U S A       Date:  1984-12       Impact factor: 11.205

5.  5' untranslated sequences are required for the translational control of a yeast regulatory gene.

Authors:  G Thireos; M D Penn; H Greer
Journal:  Proc Natl Acad Sci U S A       Date:  1984-08       Impact factor: 11.205

6.  Selection of initiation sites by eucaryotic ribosomes: effect of inserting AUG triplets upstream from the coding sequence for preproinsulin.

Authors:  M Kozak
Journal:  Nucleic Acids Res       Date:  1984-05-11       Impact factor: 16.971

7.  Evidence for translational regulation of the activator of general amino acid control in yeast.

Authors:  A G Hinnebusch
Journal:  Proc Natl Acad Sci U S A       Date:  1984-10       Impact factor: 11.205

8.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

9.  Transformation of intact yeast cells treated with alkali cations.

Authors:  H Ito; Y Fukuda; K Murata; A Kimura
Journal:  J Bacteriol       Date:  1983-01       Impact factor: 3.490

10.  A hierarchy of trans-acting factors modulates translation of an activator of amino acid biosynthetic genes in Saccharomyces cerevisiae.

Authors:  A G Hinnebusch
Journal:  Mol Cell Biol       Date:  1985-09       Impact factor: 4.272

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  13 in total

Review 1.  Eucaryotic codes.

Authors:  F Caron
Journal:  Experientia       Date:  1990-12-01

2.  A cell number-counting factor regulates levels of a novel protein, SslA, as part of a group size regulation mechanism in Dictyostelium.

Authors:  Tong Gao; Celine Roisin-Bouffay; R Diane Hatton; Lei Tang; Debra A Brock; Tiffany DeShazo; Laura Olson; Wan-Pyo Hong; Wonhee Jang; Elvia Canseco; Deenadayalan Bakthavatsalam; Richard H Gomer
Journal:  Eukaryot Cell       Date:  2007-07-27

3.  Suppression of ribosomal reinitiation at upstream open reading frames in amino acid-starved cells forms the basis for GCN4 translational control.

Authors:  J P Abastado; P F Miller; B M Jackson; A G Hinnebusch
Journal:  Mol Cell Biol       Date:  1991-01       Impact factor: 4.272

4.  TRII: A Probabilistic Scoring of Drosophila melanogaster Translation Initiation Sites.

Authors:  Michael P Weir; Michael D Rice
Journal:  EURASIP J Bioinform Syst Biol       Date:  2010-12-27

5.  uORF-seqr: A Machine Learning-Based Approach to the Identification of Upstream Open Reading Frames in Yeast.

Authors:  Pieter Spealman; Armaghan Naik; Joel McManus
Journal:  Methods Mol Biol       Date:  2021

6.  Engineering ribosomal leaky scanning and upstream open reading frames for precise control of protein translation.

Authors:  Joshua P Ferreira; William L Noderer; Alexander J Diaz de Arce; Clifford L Wang
Journal:  Bioengineered       Date:  2014-01-14       Impact factor: 3.269

7.  The first and third uORFs in RSV leader RNA are efficiently translated: implications for translational regulation and viral RNA packaging.

Authors:  O Donzé; P Damay; P F Spahr
Journal:  Nucleic Acids Res       Date:  1995-03-11       Impact factor: 16.971

8.  PERK (eIF2alpha kinase) is required to activate the stress-activated MAPKs and induce the expression of immediate-early genes upon disruption of ER calcium homoeostasis.

Authors:  Shun-Hsin Liang; Wei Zhang; Barbara C McGrath; Peichuan Zhang; Douglas R Cavener
Journal:  Biochem J       Date:  2006-01-01       Impact factor: 3.857

9.  Comparative structural and functional analysis of the olfactory receptor genes flanking the human and mouse beta-globin gene clusters.

Authors:  M Bulger; M A Bender; J H van Doorninck; B Wertman; C M Farrell; G Felsenfeld; M Groudine; R Hardison
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

10.  Reinitiation at non-canonical start codons leads to leak expression when incorporating unnatural amino acids.

Authors:  Tanja Kalstrup; Rikard Blunck
Journal:  Sci Rep       Date:  2015-07-08       Impact factor: 4.379

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