Literature DB >> 30483440

Analysis of Leuconostoc citreum strains using multilocus sequence typing.

Anshul Sharma1, Jasmine Kaur1, Sulhee Lee1, Young-Seo Park1.   

Abstract

The objective of this study was to perform genetic diversity analysis of 13 strains isolated from South Korean foods by multilocus sequence typing (MLST). For typing, seven housekeeping loci (atpA, dnaA, dnaK, gyrB, pheS, pyrG, and rpoA) were selected, amplified and analyzed. Fifty-one polymorphic sites varying from 1 to 22 in each species were identified. Thirteen sequence types were generated with allele numbers ranged from 2 to 10. The overall relationship between strains was assessed by unweighted pair group method with arithmetic mean dendrogram and minimum spanning tree. In addition, combined spits tree analysis revealed intragenic recombination. No clear relationship was observed between the isolation sources and strains. The developed MLST scheme enhanced our knowledge of the population diversity of Leu. citreum strains and will be used further for the selection of industrially important strain.

Entities:  

Keywords:  Alleles; Lactic acid bacteria; Leuconostoc citreum; MLST; Sequence type

Year:  2018        PMID： 30483440      PMCID： PMC6233419          DOI： 10.1007/s10068-018-0417-y

Source DB:  PubMed          Journal:  Food Sci Biotechnol        ISSN： 1226-7708            Impact factor:   2.391


  16 in total

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Authors:  Ji Yoon Chang; Hae Choon Chang
Journal:  J Food Sci       Date:  2010-03       Impact factor: 3.167

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Authors:  P Librado; J Rozas
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3.  Identification of a replicon from pCC3, a cryptic plasmid from Leuconostoc citreum C4 derived from kimchi, and development of a new host-vector system.

Authors:  Ji Yoon Chang; Hae Choon Chang
Journal:  Biotechnol Lett       Date:  2009-01-14       Impact factor: 2.461

4.  Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms.

Authors:  M C Maiden; J A Bygraves; E Feil; G Morelli; J E Russell; R Urwin; Q Zhang; J Zhou; K Zurth; D A Caugant; I M Feavers; M Achtman; B G Spratt
Journal:  Proc Natl Acad Sci U S A       Date:  1998-03-17       Impact factor: 11.205

5.  MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.

Authors:  Sudhir Kumar; Glen Stecher; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2016-03-22       Impact factor: 16.240

6.  Genetic diversity in Italian Lactobacillus sanfranciscensis strains assessed by multilocus sequence typing and pulsed-field gel electrophoresis analyses.

Authors:  Claudia Picozzi; Gaia Bonacina; Ileana Vigentini; Roberto Foschino
Journal:  Microbiology       Date:  2010-04-01       Impact factor: 2.777

7.  DNA Profiling of Leuconostoc citreum Strains in Fermented Foods by Repetitive Element Polymerase Chain Reaction.

Authors:  Jasmine Kaur; Anshul Sharma; Sulhee Lee; Young-Seo Park
Journal:  J Microbiol Biotechnol       Date:  2017-10-28       Impact factor: 2.351

8.  Genotypic and phenotypic characterization of Lactobacillus casei strains isolated from different ecological niches suggests frequent recombination and niche specificity.

Authors:  Hui Cai; Beatriz T Rodríguez; Wei Zhang; Jeff R Broadbent; James L Steele
Journal:  Microbiology (Reading)       Date:  2007-08       Impact factor: 2.777

9.  Genetic diversity analysis of Leuconostoc mesenteroides from Korean vegetables and food products by multilocus sequence typing.

Authors:  Anshul Sharma; Jasmine Kaur; Sulhee Lee; Young-Seo Park
Journal:  Appl Microbiol Biotechnol       Date:  2018-04-04       Impact factor: 4.813

10.  A novel multi-locus sequence typing (MLST) protocol for Leuconostoc lactis isolates from traditional dairy products in China and Mongolia.

Authors:  Tong Dan; Wenjun Liu; Zhihong Sun; Qiang Lv; Haiyan Xu; Yuqin Song; Heping Zhang
Journal:  BMC Microbiol       Date:  2014-06-09       Impact factor: 3.605
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  4 in total

1.  Tracking of deliberately inoculated Leuconostoc mesenteroides and Lactobacillus brevis in kimchi.

Authors:  Anshul Sharma; Jasmine Kaur; Sulhee Lee; Young-Seo Park
Journal:  Food Sci Biotechnol       Date:  2019-12-23       Impact factor: 2.391

2.  Research on the role of LuxS/AI-2 quorum sensing in biofilm of Leuconostoc citreum 37 based on complete genome sequencing.

Authors:  Qinglan Yang; Ying Wang; Qi An; Ren Sa; Dejian Zhang; Rihua Xu
Journal:  3 Biotech       Date:  2021-03-23       Impact factor: 2.406

3.  Multilocus Sequence Typing of Leuconostoc mesenteroides Strains From the Qinghai-Tibet Plateau.

Authors:  Jun Chen; Haoxin Lv; Zhixia Zhang; Hua Zhang; Bei Zhang; Xing Wang; Yuan Liu; Miao Zhang; Huili Pang; Guangyong Qin; Lei Wang; Zhongfang Tan
Journal:  Front Microbiol       Date:  2021-01-25       Impact factor: 5.640

4.  Tracking of Intentionally Inoculated Lactic Acid Bacteria Strains in Yogurt and Probiotic Powder.

Authors:  Anshul Sharma; Jasmine Kaur; Sulhee Lee; Young-Seo Park
Journal:  Microorganisms       Date:  2019-12-18
  4 in total

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