| Literature DB >> 33584616 |
Jun Chen1,2, Haoxin Lv3, Zhixia Zhang2, Hua Zhang1,4, Bei Zhang5, Xing Wang1, Yuan Liu1, Miao Zhang1, Huili Pang1, Guangyong Qin1, Lei Wang6, Zhongfang Tan1.
Abstract
Leuconostoc mesenteroides strains were a type of epiphytic bacterium widely used in fermented foods and products in the biochemical and pharmaceutical industries but data on its presence in foods from Qinghai-Tibet Plateau in China was scarce. In this study, molecular analysis based on multilocus sequence typing (MLST) with eight housekeeping genes (pyrG, groeL, rpoB, recA, uvrC, murC, carB, and pheS) was carried out on 45 L. mesenteroides strains isolated from different plants and dairy products from Qinghai-Tibet Plateau in China. The objective of this study was to perform genetic diversity analysis and explore the relationship between strains and isolate samples or separate regions. A total of 25 sequence types (STs) were identified with a diversity of up to 55.6%, which were grouped into one clonal complexes (CCs), 3 doublets and 17 singletons by eBURST. The results of minimum spanning tree and clustering analysis indicated these L. mesenteroides strains from the Qinghai-Tibet Plateau were relatively weakly related to the isolated region. However, there was a close relationship between the genotypes of L. mesenteroides strains and the type of the isolated sample, which was consistent with the results of API 50CH. The MLST scheme presented in this study provides a shareable and comparable sequence database and enhances our knowledge of the population diversity of L. mesenteroides strains which will be further used for the selection of industrial strains.Entities:
Keywords: Leuconostoc mesenteroides; genomes; housekeeping genes; multilocus sequence typing; phylogenetics
Year: 2021 PMID: 33584616 PMCID: PMC7874059 DOI: 10.3389/fmicb.2021.614286
Source DB: PubMed Journal: Front Microbiol ISSN: 1664-302X Impact factor: 5.640