Literature DB >> 19346325

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data.

P Librado1, J Rozas.   

Abstract

MOTIVATION: DnaSP is a software package for a comprehensive analysis of DNA polymorphism data. Version 5 implements a number of new features and analytical methods allowing extensive DNA polymorphism analyses on large datasets. Among other features, the newly implemented methods allow for: (i) analyses on multiple data files; (ii) haplotype phasing; (iii) analyses on insertion/deletion polymorphism data; (iv) visualizing sliding window results integrated with available genome annotations in the UCSC browser. AVAILABILITY: Freely available to academic users from: (http://www.ub.edu/dnasp).

Mesh：

Substances：

Year:  2009        PMID： 19346325     DOI： 10.1093/bioinformatics/btp187

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  2000 in total

1.  Genetic diversity analysis of abiotic stress response gene TaSnRK2.7-A in common wheat.

Authors:  Hongying Zhang; Xinguo Mao; Jianan Zhang; Xiaoping Chang; Chengshe Wang; Ruilian Jing
Journal:  Genetica       Date:  2011-06-03       Impact factor: 1.082

2.  Balancing immunity and tolerance: genetic footprint of natural selection in the transcriptional regulatory region of HLA-G.

Authors:  L Gineau; P Luisi; E C Castelli; J Milet; D Courtin; N Cagnin; B Patillon; H Laayouni; P Moreau; E A Donadi; A Garcia; A Sabbagh
Journal:  Genes Immun       Date:  2014-11-13       Impact factor: 2.676

3.  Phenotypic and molecular characterisation of Sporothrix globosa of diverse origin from India.

Authors:  Shivaprakash M Rudramurthy; Shamanth A Shankarnarayan; Basavaraj M Hemashetter; Santwana Verma; Smriti Chauhan; Reema Nath; Jayanthi Savio; Malini Capoor; Harsimran Kaur; Anup K Ghosh; Arunaloke Chakrabarti
Journal:  Braz J Microbiol       Date:  2020-07-30       Impact factor: 2.476

4.  Species Delimitation and Description of Mesocriconema nebraskense n. sp. (Nematoda: Criconematidae), a Morphologically Cryptic, Parthenogenetic Species from North American Grasslands.

Authors:  Magdalena Olson; Timothy Harris; Rebecca Higgins; Peter Mullin; Kirsten Powers; Sean Olson; Thomas O Powers
Journal:  J Nematol       Date:  2017-03       Impact factor: 1.402

5.  Tibet is one of the centers of domestication of cultivated barley.

Authors:  Fei Dai; Eviatar Nevo; Dezhi Wu; Jordi Comadran; Meixue Zhou; Long Qiu; Zhonghua Chen; Avigdor Beiles; Guoxiong Chen; Guoping Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-02       Impact factor: 11.205

6.  Mitochondrial DNA phylogeography of Semisulcospira libertina (Gastropoda: Cerithioidea: Pleuroceridae): implications the history of landform changes in Taiwan.

Authors:  Kui-Ching Hsu; Hor Bor; Hung-Du Lin; Po-Hsun Kuo; Mian-Shin Tan; Yuh-Wen Chiu
Journal:  Mol Biol Rep       Date:  2014-03-01       Impact factor: 2.316

7.  Protoplast Swelling and Hypocotyl Growth Depend on Different Auxin Signaling Pathways.

Authors:  Renate I Dahlke; Simon Fraas; Kristian K Ullrich; Kirka Heinemann; Maren Romeiks; Thomas Rickmeyer; Gerhard Klebe; Klaus Palme; Hartwig Lüthen; Bianka Steffens
Journal:  Plant Physiol       Date:  2017-08-31       Impact factor: 8.340

8.  Phylogeographic patterns of mtDNA variation revealed multiple glacial refugia for the frog species Feirana taihangnica endemic to the Qinling Mountains.

Authors:  Bin Wang; Jianping Jiang; Feng Xie; Cheng Li
Journal:  J Mol Evol       Date:  2013-02-05       Impact factor: 2.395

9.  Helicobacter pullorum isolated from fresh chicken meat: antibiotic resistance and genomic traits of an emerging foodborne pathogen.

Authors:  Vítor Borges; Andrea Santos; Cristina Belo Correia; Margarida Saraiva; Armelle Ménard; Luís Vieira; Daniel A Sampaio; Miguel Pinheiro; João Paulo Gomes; Mónica Oleastro
Journal:  Appl Environ Microbiol       Date:  2015-09-18       Impact factor: 4.792

10.  Hepatitis C Virus (HCV) NS3 sequence diversity and antiviral resistance-associated variant frequency in HCV/HIV coinfection.

Authors:  Cassandra B Jabara; Fengyu Hu; Katie R Mollan; Sara E Williford; Prema Menezes; Yan Yang; Joseph J Eron; Michael W Fried; Michael G Hudgens; Corbin D Jones; Ronald Swanstrom; Stanley M Lemon
Journal:  Antimicrob Agents Chemother       Date:  2014-08-04       Impact factor: 5.191
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.