Literature DB >> 30416671

CONSTRUCTION OF SPATIOTEMPORAL INFANT CORTICAL SURFACE ATLAS OF RHESUS MACAQUE.

Fan Wang1, Chunfeng Lian1, Jing Xia1, Zhengwang Wu1, Dingna Duan1, Li Wang1, Dinggang Shen1, Gang Li1.   

Abstract

As a widely used animal model in MR imaging studies, rhesus macaque helps to better understand both normal and abnormal neural development in the human brain. However, the available adult macaque brain atlases are not well suitable for study of brain development at the early postnatal stage, since this stage undergoes dramatic changes in brain appearances and structures. Building age matched atlases for this critical period is thus highly desirable yet still lacking. In this paper, we construct the first spatiotemporal (4D) cortical surface atlases for rhesus macaques from 2 weeks to 24 months, using 138 longitudinal MRI scans from 32 healthy rhesus monkeys. Specifically, we first perform intra-subject cortical surface registration to obtain within-subject mean cortical surfaces. Then, we perform inter-subject registration of within-subject mean surfaces to obtain unbiased and longitudinally-consistent 4D cortical surface atlases. Based on our 4D rhesus monkey atlases, we further chart the first developmental-trajectories-based parcellation maps using the local surface area and spectral clustering algorithm. Our 4D macaque surface atlases and parcellation maps will greatly facilitate early brain development studies of macaques.

Entities:  

Keywords:  Rhesus macaque; brain development; cortical surface atlas; monkey; parcellation

Year:  2018        PMID: 30416671      PMCID: PMC6226255          DOI: 10.1109/ISBI.2018.8363671

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  9 in total

1.  High-resolution intersubject averaging and a coordinate system for the cortical surface.

Authors:  B Fischl; M I Sereno; R B Tootell; A M Dale
Journal:  Hum Brain Mapp       Date:  1999       Impact factor: 5.038

2.  Modeling Rett Syndrome Using TALEN-Edited MECP2 Mutant Cynomolgus Monkeys.

Authors:  Yongchang Chen; Juehua Yu; Yuyu Niu; Dongdong Qin; Hailiang Liu; Gang Li; Yingzhou Hu; Jiaojian Wang; Yi Lu; Yu Kang; Yong Jiang; Kunhua Wu; Siguang Li; Jingkuan Wei; Jing He; Junbang Wang; Xiaojing Liu; Yuping Luo; Chenyang Si; Raoxian Bai; Kunshan Zhang; Jie Liu; Shaoyong Huang; Zhenzhen Chen; Shuang Wang; Xiaoying Chen; Xinhua Bao; Qingping Zhang; Fuxing Li; Rui Geng; Aibin Liang; Dinggang Shen; Tianzi Jiang; Xintian Hu; Yuanye Ma; Weizhi Ji; Yi Eve Sun
Journal:  Cell       Date:  2017-05-18       Impact factor: 41.582

3.  LINKS: learning-based multi-source IntegratioN frameworK for Segmentation of infant brain images.

Authors:  Li Wang; Yaozong Gao; Feng Shi; Gang Li; John H Gilmore; Weili Lin; Dinggang Shen
Journal:  Neuroimage       Date:  2014-12-22       Impact factor: 6.556

4.  Longitudinal magnetic resonance imaging study of rhesus monkey brain development.

Authors:  L Malkova; E Heuer; R C Saunders
Journal:  Eur J Neurosci       Date:  2006-12       Impact factor: 3.386

5.  Construction of 4D high-definition cortical surface atlases of infants: Methods and applications.

Authors:  Gang Li; Li Wang; Feng Shi; John H Gilmore; Weili Lin; Dinggang Shen
Journal:  Med Image Anal       Date:  2015-04-17       Impact factor: 8.545

6.  Spherical demons: fast diffeomorphic landmark-free surface registration.

Authors:  B T Thomas Yeo; Mert R Sabuncu; Tom Vercauteren; Nicholas Ayache; Bruce Fischl; Polina Golland
Journal:  IEEE Trans Med Imaging       Date:  2009-08-25       Impact factor: 10.048

7.  Measuring the dynamic longitudinal cortex development in infants by reconstruction of temporally consistent cortical surfaces.

Authors:  Gang Li; Jingxin Nie; Li Wang; Feng Shi; John H Gilmore; Weili Lin; Dinggang Shen
Journal:  Neuroimage       Date:  2013-12-27       Impact factor: 6.556

8.  The UNC-Wisconsin Rhesus Macaque Neurodevelopment Database: A Structural MRI and DTI Database of Early Postnatal Development.

Authors:  Jeffrey T Young; Yundi Shi; Marc Niethammer; Michael Grauer; Christopher L Coe; Gabriele R Lubach; Bradley Davis; Francois Budin; Rebecca C Knickmeyer; Andrew L Alexander; Martin A Styner
Journal:  Front Neurosci       Date:  2017-02-02       Impact factor: 4.677

9.  Longitudinal analysis of the developing rhesus monkey brain using magnetic resonance imaging: birth to adulthood.

Authors:  Julia A Scott; David Grayson; Evan Fletcher; Aaron Lee; Melissa D Bauman; Cynthia Mills Schumann; Michael H Buonocore; David G Amaral
Journal:  Brain Struct Funct       Date:  2015-07-10       Impact factor: 3.270

  9 in total
  5 in total

1.  Construction of Spatiotemporal Infant Cortical Surface Functional Templates.

Authors:  Ying Huang; Fan Wang; Zhengwang Wu; Zengsi Chen; Han Zhang; Li Wang; Weili Lin; Dinggang Shen; Gang Li
Journal:  Med Image Comput Comput Assist Interv       Date:  2020-09-29

Review 2.  Computational neuroanatomy of baby brains: A review.

Authors:  Gang Li; Li Wang; Pew-Thian Yap; Fan Wang; Zhengwang Wu; Yu Meng; Pei Dong; Jaeil Kim; Feng Shi; Islem Rekik; Weili Lin; Dinggang Shen
Journal:  Neuroimage       Date:  2018-03-21       Impact factor: 6.556

3.  SPHERICAL U-NET FOR INFANT CORTICAL SURFACE PARCELLATION.

Authors:  Fenqiang Zhao; Shunren Xia; Zhengwang Wu; Li Wang; Zengsi Chen; Weili Lin; John H Gilmore; Dinggang Shen; Gang Li
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2019-07-11

4.  Mapping hemispheric asymmetries of the macaque cerebral cortex during early brain development.

Authors:  Jing Xia; Fan Wang; Zhengwang Wu; Li Wang; Caiming Zhang; Dinggang Shen; Gang Li
Journal:  Hum Brain Mapp       Date:  2019-09-18       Impact factor: 5.038

5.  Gyral peaks: Novel gyral landmarks in developing macaque brains.

Authors:  Songyao Zhang; Poorya Chavoshnejad; Xiao Li; Lei Guo; Xi Jiang; Junwei Han; Li Wang; Gang Li; Xianqiao Wang; Tianming Liu; Mir Jalil Razavi; Shu Zhang; Tuo Zhang
Journal:  Hum Brain Mapp       Date:  2022-06-17       Impact factor: 5.399

  5 in total

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