Literature DB >> 34350425

Construction of Spatiotemporal Infant Cortical Surface Functional Templates.

Ying Huang1,2, Fan Wang1, Zhengwang Wu1, Zengsi Chen3, Han Zhang1, Li Wang1, Weili Lin1, Dinggang Shen1, Gang Li1.   

Abstract

Infant cortical surface templates play an essential role in spatial normalization of cortical surfaces across individuals in pediatric neuroimaging analysis. However, existing infant surface templates have two major limitations in functional MRI analysis. First, they are constructed by co-registration of cortical surfaces based on structural attributes, which cannot lead to accurate functional alignment, due to the highly variable relationship between cortical folds and functions. Second, they are constructed by simply averaging co-registered cortical attributes, which is sensitive to registration errors and leads to blurred attribute patterns on templates, thus deteriorating the accuracy in spatial normalization. Therefore, the construction of infant cortical functional templates encoding sharp functional architectures is critical for infant fMRI analysis. To this end, we construct the first set of spatiotemporal infant cortical surface functional templates using Wasserstein barycenter and a state-of-the-art functional feature, namely the gradient density of functional connectivity. To address the first issue, we leverage functional gradient density to drive surface registration to improve inter-individual functional correspondences. To address the second issue, we compute templates based on the Wasserstein barycenter of functional gradient density maps across individuals. The motivation is that Wasserstein barycenter represents a meaningful mean under the Wasserstein distance metric, which takes into account the alignment of local spatial distribution of cortical attributes and thus is robust to registration errors, leading to sharp and detailed patterns on templates. Experiments on a dataset with 207 fMRI scans between 0 and 2 years of age show the validity and accuracy of our constructed infant cortical functional templates.

Keywords:  Functional templates; Infant; Wasserstein barycenter

Year:  2020        PMID: 34350425      PMCID: PMC8330392          DOI: 10.1007/978-3-030-59728-3_24

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  24 in total

1.  Parcellations and hemispheric asymmetries of human cerebral cortex analyzed on surface-based atlases.

Authors:  David C Van Essen; Matthew F Glasser; Donna L Dierker; John Harwell; Timothy Coalson
Journal:  Cereb Cortex       Date:  2011-11-02       Impact factor: 5.357

2.  Construction of 4D infant cortical surface atlases with sharp folding patterns via spherical patch-based group-wise sparse representation.

Authors:  Zhengwang Wu; Li Wang; Weili Lin; John H Gilmore; Gang Li; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2019-05-21       Impact factor: 5.038

3.  Fetal cortical surface atlas parcellation based on growth patterns.

Authors:  Jing Xia; Fan Wang; Oualid M Benkarim; Gerard Sanroma; Gemma Piella; Miguel A González Ballester; Nadine Hahner; Elisenda Eixarch; Caiming Zhang; Dinggang Shen; Gang Li
Journal:  Hum Brain Mapp       Date:  2019-05-20       Impact factor: 5.038

Review 4.  Computational neuroanatomy of baby brains: A review.

Authors:  Gang Li; Li Wang; Pew-Thian Yap; Fan Wang; Zhengwang Wu; Yu Meng; Pei Dong; Jaeil Kim; Feng Shi; Islem Rekik; Weili Lin; Dinggang Shen
Journal:  Neuroimage       Date:  2018-03-21       Impact factor: 6.556

5.  The organization of the human cerebral cortex estimated by intrinsic functional connectivity.

Authors:  B T Thomas Yeo; Fenna M Krienen; Jorge Sepulcre; Mert R Sabuncu; Danial Lashkari; Marisa Hollinshead; Joshua L Roffman; Jordan W Smoller; Lilla Zöllei; Jonathan R Polimeni; Bruce Fischl; Hesheng Liu; Randy L Buckner
Journal:  J Neurophysiol       Date:  2011-06-08       Impact factor: 2.714

6.  Construction of 4D high-definition cortical surface atlases of infants: Methods and applications.

Authors:  Gang Li; Li Wang; Feng Shi; John H Gilmore; Weili Lin; Dinggang Shen
Journal:  Med Image Anal       Date:  2015-04-17       Impact factor: 8.545

7.  fMRI-Based Inter-Subject Cortical Alignment Using Functional Connectivity.

Authors:  Bryan R Conroy; Benjamin D Singer; James V Haxby; Peter J Ramadge
Journal:  Adv Neural Inf Process Syst       Date:  2009

8.  Functional System and Areal Organization of a Highly Sampled Individual Human Brain.

Authors:  Timothy O Laumann; Evan M Gordon; Babatunde Adeyemo; Abraham Z Snyder; Sung Jun Joo; Mei-Yen Chen; Adrian W Gilmore; Kathleen B McDermott; Steven M Nelson; Nico U F Dosenbach; Bradley L Schlaggar; Jeanette A Mumford; Russell A Poldrack; Steven E Petersen
Journal:  Neuron       Date:  2015-07-23       Impact factor: 17.173

9.  Function-based intersubject alignment of human cortical anatomy.

Authors:  Mert R Sabuncu; Benjamin D Singer; Bryan Conroy; Ronald E Bryan; Peter J Ramadge; James V Haxby
Journal:  Cereb Cortex       Date:  2010-01       Impact factor: 5.357

10.  The minimal preprocessing pipelines for the Human Connectome Project.

Authors:  Matthew F Glasser; Stamatios N Sotiropoulos; J Anthony Wilson; Timothy S Coalson; Bruce Fischl; Jesper L Andersson; Junqian Xu; Saad Jbabdi; Matthew Webster; Jonathan R Polimeni; David C Van Essen; Mark Jenkinson
Journal:  Neuroimage       Date:  2013-05-11       Impact factor: 6.556

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  1 in total

1.  S3Reg: Superfast Spherical Surface Registration Based on Deep Learning.

Authors:  Fenqiang Zhao; Zhengwang Wu; Fan Wang; Weili Lin; Shunren Xia; Dinggang Shen; Li Wang; Gang Li
Journal:  IEEE Trans Med Imaging       Date:  2021-07-30       Impact factor: 11.037

  1 in total

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