Seyed Hossein Jamali1, Thijs van Westen2,3, Othonas A Moultos1, Thijs J H Vlugt1. 1. Engineering Thermodynamics, Process & Energy Department, Faculty of Mechanical, Maritime and Materials Engineering , Delft University of Technology , Leeghwaterstraat 39 , 2628CB Delft , The Netherlands. 2. Institute AMOLF , Science Park 104 , 1098XG , Amsterdam , The Netherlands. 3. Institute of Thermodynamics and Thermal Process Engineering , University of Stuttgart , Pfaffenwaldring 9 , D-70569 Stuttgart , Germany.
Abstract
Knowledge on thermodynamic and transport properties of aqueous solutions of carbohydrates is of great interest for process and product design in the food, pharmaceutical, and biotechnological industries. Molecular simulation is a powerful tool to calculate these properties, but current classical force fields cannot provide accurate estimates for all properties of interest. The poor performance of the force fields is mainly observed for concentrated solutions, where solute-solute interactions are overestimated. In this study, we propose a method to refine force fields, such that solute-solute interactions are more accurately described. The OPLS force field combined with the SPC/Fw water model is used as a basis. We scale the nonbonded interaction parameters of sucrose, a disaccharide. The scaling factors are chosen in such a way that experimental thermodynamic and transport properties of aqueous solutions of sucrose are accurately reproduced. Using a scaling factor of 0.8 for Lennard-Jones energy parameters (ϵ) and a scaling factor of 0.95 for partial atomic charges ( q), we find excellent agreement between experiments and computed liquid densities, thermodynamic factors, shear viscosities, self-diffusion coefficients, and Fick (mutual) diffusion coefficients. The transferability of these optimum scaling factors to other carbohydrates is verified by computing thermodynamic and transport properties of aqueous solutions of d-glucose, a monosaccharide. The good agreement between computed properties and experiments suggests that the scaled interaction parameters are transferable to other carbohydrates, especially for concentrated solutions.
Knowledge on thermodynamic and transport properties of aqueous solutions of carbohydrates is of great interest for process and product design in the food, pharmaceutical, and biotechnological industries. Molecular simulation is a powerful tool to calculate these properties, but current classical force fields cannot provide accurate estimates for all properties of interest. The poor performance of the force fields is mainly observed for concentrated solutions, where solute-solute interactions are overestimated. In this study, we propose a method to refine force fields, such that solute-solute interactions are more accurately described. The OPLS force field combined with the SPC/Fw water model is used as a basis. We scale the nonbonded interaction parameters of sucrose, a disaccharide. The scaling factors are chosen in such a way that experimental thermodynamic and transport properties of aqueous solutions of sucrose are accurately reproduced. Using a scaling factor of 0.8 for Lennard-Jones energy parameters (ϵ) and a scaling factor of 0.95 for partial atomic charges ( q), we find excellent agreement between experiments and computed liquid densities, thermodynamic factors, shear viscosities, self-diffusion coefficients, and Fick (mutual) diffusion coefficients. The transferability of these optimum scaling factors to other carbohydrates is verified by computing thermodynamic and transport properties of aqueous solutions of d-glucose, a monosaccharide. The good agreement between computed properties and experiments suggests that the scaled interaction parameters are transferable to other carbohydrates, especially for concentrated solutions.
Saccharides
define a class of carbohydrates considered vital for
a wide range of biological and industrial processes.[1,2] Examples include the role of (poly-)sacharides or glyco-proteins
in cryo- and lyopreservation of biomaterials and foods,[3−8] the regulation of the osmotic pressure in living cells,[9] the interplay between saccharides and proteins
in the cell membrane,[10,11] and use as a feedstock for the
production of biofuels and renewable chemicals in biotechnology.[1] Either in biology or in industrial applications,
saccharides predominantly occur in aqueous solutions. To obtain a
better understanding of the underlying mechanisms defining the biological
function of a saccharide, or to obtain a better description of the
thermophysical properties of saccharide solutions (as needed in technological
applications), requires a molecular-level description of the interactions
between sugars, water, and water–sugar. Classical molecular
simulations provide a valuable tool for this; however, it is essential
that the used force fields reproduce relevant volumetric, structural,
and dynamic properties of the system of interest. For aqueous solutions
of saccharides, this has proven a difficult task.As several
studies[12−17] have shown, a common problem when applying carbohydrate force fields
such as CHARMM,[18−21] GLYCAM06,[22] GROMOS,[23,24] or OPLS-AA[28] to saccharide solutions
is the overestimation of the sugar–sugar interactions, leading
to strong sugar aggregation at elevated sugar concentrations. As a
result, both thermodynamic properties (densities, activity coefficients,
thermodynamic factors, second virial coefficients, etc.) and transport
properties (shear viscosities, diffusion coefficients, etc.) of concentrated
solutions are generally not well reproduced.[12−15,17] Recent work showed that rescaling the sugar–sugar nonbonded
interactions to lower values improves the description.[13,15,29] Basically, two strategies have
been proposed. In the first approach (e.g., the work of Sauter and
Grafmüller[14] and Lay et al.[15]), only the dispersion interactions—more
precisely, the energy parameters for some of the Lennard-Jones (LJ)
interactions between sugars—are modified. In the second approach
(e.g., Batista et al.[13]), only the partial
atomic charges of the sugars are scaled. The first approach improves
the description of thermodynamic properties, such as the osmotic pressure
and second virial coefficient.[14,15] However, transport
properties appear to be less affected by solely modifying the dispersion
interactions (see the Supporting Information of Lay et al.[15] for results on the viscosity of glucose solutions).
Results obtained using the second approach indicate that rescaling
partial atomic charges leads to considerable improvements in the description
of transport properties and suggest that thermodynamic properties
(e.g., density) are also better described. The results of Batista
et al.[13] are not conclusive, however, as
mixture properties known to be more sensitive to changes in the partial
charges of the atoms (e.g., thermodynamic factors and osmotic coefficients)
were not taken into account. Also, the only transport property studied
was the viscosity, and diffusion coefficients were not considered.In this work, we first present a more complete analysis on how
the properties of aqueous carbohydrate solutions change when the LJ
or electrostatic interactions are scaled. The force fields of Batista
et al.[13] (OPLS with scaled partial atomic
charges) and Lay et al.[15] (GLYCAM06 with
scaled LJ interactions) are analyzed in more detail. We focus on the
disaccharidesucrose (Figure ) as a relevant test case, as this molecule has many applications,
ranging from biology to food science.[3,4,6,7] Our results show that
only scaling partial charges is insufficient to reproduce both thermodynamic
and transport properties of concentrated aqueous saccharide solutions.
Scaling only the dispersion interactions leads to significantly better
agreement, with qualitative improvements in transport properties,
as well as thermodynamic properties. Although scaling the LJ interactions
improves the force field, our analysis indicates that obtaining quantitative
agreement between experiments and computed properties of saccharide
solutions may require a global optimization procedure of the force
field, with different scaling factors for LJ interactions of different
atom pairs. Since the choice of atom pairs is rather arbitrary, and
an optimization of many force field parameters is difficult, we here
propose a different approach, in which all LJ energy
parameters and all partial atomic charges of the
sugars are scaled simultaneously.[29] This
procedure only requires optimization of two parameters: one scaling
factor for LJ interactions and one scaling factor for partial atomic
charges. For the optimization of sucrose nonbonded interaction parameters,
the OPLS force field[25,26] is used as a basis. The transferability
of the refined OPLS force field is analyzed for d-glucose
as a prototypical example of monosaccharides.
Figure 1
Schematic and atomistic
representations of sucrose. The atomistic
representation was created by using iRASPA.[79]
Schematic and atomistic
representations of sucrose. The atomistic
representation was created by using iRASPA.[79]This manuscript is organized as
follows. In section 2, the details of simulations
and equations used for computing
transport and thermodynamic properties are provided. In section 3, a set of optimum scaling factors for nonbonded
interaction parameters of the OPLS force field is obtained and the
accuracy of the refined force field is investigated. Our conclusions
are summarized in the last section.
Simulation
Details
Force-field-based equilibrium MD simulations were
carried out to
compute thermodynamic properties (i.e., liquid densities and thermodynamic
factors) and transport properties (i.e., shear viscosities, self-,
and Fick diffusion coefficients) of water–sucrose mixtures
at 298 K and 1 atm. The software package LAMMPS[30] (version of February 16, 2016) was used to perform the
MD simulations. The molecular configurations of aqueous sucrose solutions
were made in Packmol.[31] We considered five
systems, with sucrose mass fractions (wsucrose) of 20%, 30%, 40%, 50%, and 60%. These systems contained 6, 9, 12,
16, and 20 sucrose molecules combined with 456, 399, 342, 304, and
253 water molecules, respectively. These systems yield homogeneous
liquid solutions, as sucrose crystallizes in mixtures with a mass
fraction above 67% at 298 K.[32] The input
files for these configurations are produced using VMD.[33] The same procedure was followed to construct
LAMMPS input files for four aqueous glucose solutions. To create mixtures
with glucose mass fractions (wglucose)
of 20%, 30%, 40%, and 50%, the systems contained 12, 18, 24, and 30
glucose molecules combined with 480, 420, 360, and 300 water molecules,
respectively. At 298 K, α-d-glucose monohydrate forms
in aqueous glucose solutions with mass fractions above 51%.[34]Two groups of force fields are considered
for sucrose: GLYCAM06[22] and OPLS-AA.[25,26] The three-site
SPC/Fw water model is used.[35] Nonbonded
LJ interactions are truncated at a cutoff radius of 9 Å, and
analytic tail corrections are included for the computation of energies
and pressures.[36] The standard mixing rules
of the OPLS force field (see the Supporting Information) are applied for nonbonded LJ interactions between different atoms
in different molecules, or atoms of the same molecule separated by
at least three bonds.[25,36] The Lorentz–Berthelot
mixing rules are considered for the GLYCAM06 force field.[36] The 1–4 nonbonded intramolecular interactions
are scaled by a factor of 0.5 for the OPLS force field[25] and a factor of 0 for the GLYCAM06 force field.[22] Long-range electrostatic interactions are taken
into account using the PPPM method with a relative precision of 10–6.[36] The velocity-Verlet
algorithm with a time step of 1 fs is used to integrate the equations
of motion.[36]Liquid densities are
computed from an NPT ensemble, in which the
temperature and pressure of the system are controlled by using the
Nosé–Hoover thermostat and barostat.[36] All transport properties and thermodynamic factors are
computed in an NVT ensemble, where the temperature is kept fixed by
using the Nosé–Hoover thermostat.[36] The lengths of each simulation for computing transport
and thermodynamic properties are 200 ns and (at least) 10 ns, respectively.
To assert the statistical uncertainties, five independent simulations
were performed for each condition.The Einstein approach to
calculating transport properties in equilibrium
MD simulations is used.[36−38] The shear viscosity is obtained
from the off-diagonal components of the stress tensor (P), according to[36,38,39]where kB and t are the Boltzmann constant and time
and V and T are the volume and temperature
of the system. The angle brackets ⟨...⟩ denote an ensemble
average. The self-diffusion coefficient of species i is calculated based on the mean-square displacement, as[36,37]in
which N is the number of molecules of
species i and r is the position of jth
molecule of species i. The finite-size effects of
self-diffusion coefficients
are taken into account by including the analytic correction proposed
by Yeh and Hummer.[40,41]There are two approaches
to defining the mutual diffusion coefficient
of a binary mixture:[42−44] the well-known Fick diffusion coefficient (DFick) is mainly used in industrial applications,
since Fick’s law relates the mass flux to gradients in concentrations,
which can be measured experimentally. An equivalent formulation is
based on the Maxwell–Stefan (MS) diffusion coefficient,[45] which relates the mass flux to gradients in
chemical potentials. For binary mixtures, Fick and MS diffusion coefficients
are related by the thermodynamic factor, Γ, according to[42,44,46−49]with Γ
defined as[42,46,49−51]where x1 and γ1 are the mole fraction
and activity
coefficient of species 1, respectively. For most binary mixtures (including
those considered in this work), the deviations of the thermodynamic
factor and solute activity coefficient from 1 are of opposite sign.[50,52] For such cases, Γ > 1 determines the case that the interactions
between different species are favored, whereas 0 < Γ <
1 determines the case that interactions between similar species dominate.
The thermodynamic factor can thus be used as a measure for the degree
of self-association of solutes. In some studies on water–carbohydrate
solutions,[15,16] the osmotic coefficient (Φ
= 1 + ln(γsolvent)/ln(xsolvent)) is used instead. For the solutions studied, the osmotic coefficient
contains the same information as the thermodynamic factor, with Φ
> 1 determining the case that the interactions between different
species
are favored, while Φ < 1 determines the case that the interactions
between similar species are strongest.Fick diffusion coefficients
can be obtained both from equilibrium
or from nonequilibrium MD simulations.[36,44,53−55] Here, we calculate Fick diffusivities
based on eq , with MS
diffusion coefficients and thermodynamic factors obtained from equilibrium
MD simulations.[44,56,57] Further details can be found in the review article of Liu et al.[44]The MS diffusivity can be computed by
calculating the Onsager coefficients
(Λ):[44,56]The MS diffusivity of a binary
system then follows from[44,51]The finite-size effects of
Fick and MS diffusion coefficients are corrected using the analytic
relation proposed by Jamali et al.[58] The
finite-size effects of MS diffusion coefficients can be as large as
the magnitude of the computed MS diffusivities, depending on the nonideality
of the mixture.[58] As the modified force
field is verified by comparing the mutual diffusivities with experiments,
it is crucial to consider these finite-size effects and compute the
mutual diffusion coefficients in the thermodynamic limit. To improve
the sampling of the correlation functions in eqs , 2, and 5, an order-n algorithm is used.[37,59]The
thermodynamic factor is calculated from the so-called Kirkwood–Buff
coefficients (G), which are obtained
by integrating radial distribution functions over volume[60,61] and applying appropriate finite-size corrections.[62−65] For a binary mixture, the thermodynamic
factor can be written as[44]where c1 is the number density of species
1. The finite-size effects
of radial distribution functions are corrected for according to the
work of van der Vegt and co-workers.[62,63] Kirkwood–Buff
coefficients (G) are computed in the
thermodynamic limit using the method of Krüger et al.[64,65]
Results and Discussion
In this section, we
first analyze several procedures for optimizing
force fields of carbohydrate solutions. The quality of a procedure
is measured by the accuracy with which thermodynamic factors and shear
viscosities are estimated. Once the optimal procedure is established,
we continue by developing and verifying a refined OPLS force field
for aqueous solutions of sucrose. The transferability of the refined
force field to aqueous solutions of other carbohydrates is examined
by considering glucose. All computed properties presented in this
section, and the force field parameters of both the original and refined
OPLS force fields, are listed in the Supporting Information.
Analysis of Different Optimization
Procedures
Batista et al.[13] studied
the effects
of nonbonded electrostatic interactions in the GROMOS 56ACARBO and OPLS force fields for aqueous solutions of d-glucose.
This study concluded that the properties of diluted solutions can
be predicted accurately based on the 56ACARBO force field.
At high glucose mass fractions (wglucose > 0.60), the overestimated self-association of glucose molecules
was shown to result in overestimation of shear viscosities by up to
650%.[13] To decrease the solute–solute
interactions, all partial atomic charges of the glucose molecule were
scaled by a factor 0.8. The estimation of shear viscosities of concentrated
water–glucose mixtures was thereby improved significantly,
with a maximum deviation from experiments of 27%.[13] Besides an analysis on the density of the solution, these
authors did not consider thermodynamic properties such as osmotic
coefficients and thermodynamic factors to verify the performance of
the optimized force field.Inspired by the promising results
of Batista et al.,[13] we study a modified
OPLS force field for which the partial atomic charges of sucrose are
scaled by a factor 0.8. Similar to the work of Batista et al.,[13] the LJ interactions parameters remain unchanged.
In Figure , thermodynamic
factors and shear viscosities computed based on the original OPLS
force field and the OPLS force field with scaled partial atomic charges
are compared to experimental data at 298 K and 1 atm. In agreement
with the results of Batista et al.,[13] the
overestimation of shear viscosities is decreased by scaling the electrostatic
interactions. This is especially the case for mixtures of high concentrations
of sucrose, where sucrose–sucrose interactions mainly determine
the properties of the mixture. Thermodynamic factors are less accurately
reproduced. Our results show qualitatively incorrect changes as compared
to the original OPLS force field, with larger deviations of thermodynamic
factors from experiments. Estimated thermodynamic factors are closer
to zero, meaning the self-association of sucrose has increased—not
decreased. This suggests that merely scaling the partial atomic charges
is insufficient to reproduce both thermodynamic and transport properties
of carbohydrate solutions.
Figure 2
Computed (a) shear viscosities and (b) thermodynamic
factors for
water–sucrose mixtures as a function of the mass fraction of
sucrose. The properties are computed based on the OPLS force field[25] (blue circles) and the OPLS force field with
scaled partial atomic charges[13] (red squares).
The SPC/Fw water model was used.[35] Lines
represent (a) experimental shear viscosities (solid,[80] dashed[81]) and (b) thermodynamic
factors (solid,[82] dashed[83]). Error bars indicate 95% confidence intervals. No error
bars are reported for the thermodynamic factors.
Computed (a) shear viscosities and (b) thermodynamic
factors for
water–sucrose mixtures as a function of the mass fraction of
sucrose. The properties are computed based on the OPLS force field[25] (blue circles) and the OPLS force field with
scaled partial atomic charges[13] (red squares).
The SPC/Fw water model was used.[35] Lines
represent (a) experimental shear viscosities (solid,[80] dashed[81]) and (b) thermodynamic
factors (solid,[82] dashed[83]). Error bars indicate 95% confidence intervals. No error
bars are reported for the thermodynamic factors.Another approach to optimizing a force field is to modify
the LJ
parameters of solute molecules. As a good rule of thumb, the size
(σ) and energy (ϵ) parameters can be modified to improve
the predictions of volumetric (e.g., liquid densities) and thermal
(e.g., heat of vaporization) properties, respectively.[2,23,27,66] In recent modifications of the MARTINI, CHARMM, and GLYCAM06 force
fields for carbohydrate solutions,[15,17] only the energy
parameters were changed. An example is the work of Lay et al.,[15] in which the CHARMM and GLYCAM06 force fields
were modified by altering some of the LJ energy parameters (ϵ) defining the solute–solute interactions
in aqueous solutions of glucose. On the basis of introducing modifications
to carbon–carbon and carbon–oxygen interactions, accurate
predictions of osmotic coefficients were obtained. However, shear
viscosities were underestimated by about 60%.[15]The modified GLYCAM06 force field of Lay et al. is analyzed
in
more detail in Figure . In this figure, computed thermodynamic factors and shear viscosities
of water–sucrose mixtures are compared to results obtained
based on the original GLYCAM06 force field. The modified energy parameters
considerably improve the description of both properties, for a wide
range of sucrose concentrations. Shear viscosities are especially
well reproduced, showing a good agreement with experiments. We note
that the improved results for viscosity as compared to those reported
by Lay et al.[15] may be due to using the
SPC/Fw water model instead of TIP3P. The TIP3P water model is known
to provide poor estimates for the shear viscosity of water.[67−69] The SPC/Fw water model is one of the most accurate three-site models
for estimating transport properties of water under ambient conditions.[35,69,70] We chose a three-site model due
to the smaller computational requirements compared to more complex
models such as four-site (e.g., TIP4P/2005[71]), five-site (e.g., TIP5P-E[72]), and polarizable
(e.g., HBP[73]) water models. An extensive
comparison of the performance of different water models can be found
in the literature.[66,68,69,74] Although thermodynamic factors are not as
well described as shear viscosities, the observed increase in the
thermodynamic factor is at least qualitatively correct. These results
suggest that modifying the LJ energy parameters of solute molecules
could be a sufficient procedure to develop a force field that accurately
reproduces both thermodynamic and transport properties of carbohydrate
solutions.
Figure 3
Computed (a) shear viscosities and (b) thermodynamic factors for
water–sucrose mixtures as a function of the mass fraction of
sucrose at 298 K and 1 atm. The properties are computed based on the
GLYCAM06 force field[22] (blue circles) and
a modified GLYCAM force field as proposed by Lay et al.[15] (red squares), in which some of the LJ sugar–sugar
interactions are modified. The SPC/Fw water model was used.[35] Lines represent (a) experimental shear viscosities
(solid,[80] dashed[81]) and (b) thermodynamic factors (solid,[82] dashed[83]). Error bars indicate 95% confidence
intervals. No error bars are reported for the thermodynamic factors.
Computed (a) shear viscosities and (b) thermodynamic factors for
water–sucrose mixtures as a function of the mass fraction of
sucrose at 298 K and 1 atm. The properties are computed based on the
GLYCAM06 force field[22] (blue circles) and
a modified GLYCAM force field as proposed by Lay et al.[15] (red squares), in which some of the LJ sugar–sugar
interactions are modified. The SPC/Fw water model was used.[35] Lines represent (a) experimental shear viscosities
(solid,[80] dashed[81]) and (b) thermodynamic factors (solid,[82] dashed[83]). Error bars indicate 95% confidence
intervals. No error bars are reported for the thermodynamic factors.While the approach of Lay et al.
seems effective, this approach
may require the modification of the LJ energy parameters of many different
atom pairs, each with its own scaling factor. The choice of atoms
whose ϵ is changed requires a profound understanding of the
interactions between the atoms of the carbohydrate, which is not always
known a priori. This, combined with the fact that
the optimization of many force field parameters usually proceeds by
trial and error (and is thus computationally expensive), leads us
to suggest a different approach. On the basis of the results shown
in Figures and 3, we propose scaling the partial atomic charges
and LJ energy parameters of all atoms of the carbohydrate.
This can simultaneously improve the description of thermodynamic and
transport properties, without requiring different scaling factors
for different atom pairs. We propose to scale the nonbonded interaction
parameters in such a way that experimental data for at least one thermodynamic
property (e.g., thermodynamic factors) and one transport property
(e.g., shear viscosities) can be reproduced by the force field. The
advantage of this approach over the method of Lay et al.[15] is a considerable reduction in the number of
modification parameters to two: a single scaling factor for all LJ
energy parameters of the carbohydrate and a single scaling factor
for all partial atomic charges of the carbohydrate.
Refined OPLS Force Field
The optimization
procedure proposed in the previous section is here applied to the
OPLS force field, for aqueous solutions of sucrose. As in the previous
section, thermodynamic factors and shear viscosities are considered
as target properties. The following scaled LJ energy parameters (first
number) and scaled partial atomic charges (second number) are considered:
1.0 and 1.0 (corresponding to the original OPLS force field), 1.0
and 0.8 (corresponding to the work of Batista et al.[13]), 0.8 and 1.0, and 0.8 and 0.8.In Figure , computed thermodynamic factors
and shear viscosities are compared to experimental data. In agreement
with what is shown in Figure , scaling all partial atomic charges by a factor less than
1 decreases both the thermodynamic factors and shear viscosities.
Scaling all LJ interactions by a factor less than 1 decreases the
shear viscosities while increasing the thermodynamic factors. Adjusting
LJ energy parameters can thus correct for a strong decrease in thermodynamic
factors caused by scaling down partial atomic charges (as in Figure ). Of these four
combinations, the best combination is for the scaling factors of 0.8
and 1.0 for the LJ energy parameters and partial atomic charges, respectively.
By interpolating between the computed thermodynamic factors and shear
viscosities, corresponding to the four combinations of scaling factors,
the optimum combination is a scaling factor of 0.8 for the LJ energy
parameters and 0.95 for the partial atomic charges. Hereafter, the
OPLS force field with this combination of scaling factors will be
referred to as the refined OPLS force field. The interaction parameters
of this force field (as well as the original OPLS force field) are
listed in the Supporting Information.
Figure 4
Computed
(a) shear viscosities and (b) thermodynamic factors for
water–sucrose mixtures as a function of the mass fraction of
sucrose. All LJ energy (ϵ) parameters and partial atomic charges
(q) of the OPLS force field[25] are scaled by respectively 0.8 and 0.8 (green diamonds), 0.8 and
1.0 (magenta pentagons), 1.0 and 0.8 (red squares), and 1.0 and 1.0
(blue circles). The SPC/Fw water model was used.[35] Lines represent (a) experimental shear viscosities (solid,[80] dashed[81]) and (b)
thermodynamic factors (solid,[82] dashed[83]). Error bars indicate 95% confidence intervals.
No error bars are reported for thermodynamic factors.
Computed
(a) shear viscosities and (b) thermodynamic factors for
water–sucrose mixtures as a function of the mass fraction of
sucrose. All LJ energy (ϵ) parameters and partial atomic charges
(q) of the OPLS force field[25] are scaled by respectively 0.8 and 0.8 (green diamonds), 0.8 and
1.0 (magenta pentagons), 1.0 and 0.8 (red squares), and 1.0 and 1.0
(blue circles). The SPC/Fw water model was used.[35] Lines represent (a) experimental shear viscosities (solid,[80] dashed[81]) and (b)
thermodynamic factors (solid,[82] dashed[83]). Error bars indicate 95% confidence intervals.
No error bars are reported for thermodynamic factors.To verify that the refined OPLS force field outperforms
the original
OPLS force field, several thermodynamic and transport properties of
the water–sucrose mixtures are computed at 298 K and 1 atm.
In Figure , computed
(a) liquid densities, (b) thermodynamic factors, (c) shear viscosities,
(d) self-diffusivities of sucrose, (e) water, and (f) Fick diffusion
coefficients are compared to experimental data for a wide range of
concentrations. As compared to the original OPLS force field, thermodynamic
properties (i.e., liquid densities and thermodynamic factors) computed
using the refined OPLS force field show a considerably better agreement
with experiments. In Figure a, excellent agreement between computed liquid densities and
experimental data is observed. Since the size (σ) parameters
of the LJ potentials are unaltered, the differences between liquid
densities computed using the original and refined OPLS force fields
are small. These differences reach a maximum value of 1%, at a sucrose
mass fraction of 60%. Since the original OPLS force field overestimates
solute–solute interactions at high concentrations of sucrose,
the sucrose molecules tend to aggregate and form more packed liquid
structures. This increases the density of the liquid, leading to overestimation
of computed densities. Due to this overestimation of solute–solute
interactions by the original OPLS force field, the thermodynamic factors
are underestimated (see Figure b). The good agreement between computed thermodynamic factors
and experimental data confirms an accurate description of the solute–solute
and solute–water interactions by the refined OPLS force field.
Figure 5
Computed
(a) densities, (b) thermodynamic factors, (c) shear viscosities,
(d) self-diffusivities of sucrose, (e) self-diffusivities of water,
and (f) Fick (mutual) diffusion coefficients for water–sucrose
mixtures as a function of the mass fraction of sucrose. Temperature
and pressure are 298 K and 1 atm, respectively. The results of the
original OPLS force field[25] are shown by
blue circles. The results of refined OPLS force field (scaled LJ energy
parameters and partial atomic charges of all atoms of sucrose by factors
of 0.8 and 0.95, respectively) are shown by red squares. Lines represent
experimental data for (a) densities (solid,[84] dashed[85]), (b) thermodynamic factors
(solid,[82] dashed[83]), (c) shear viscosities (solid,[80] dashed[81]), (d) self-diffusivities of sucrose (solid,[81] dashed[86]), (e) self-diffusivities
of water (solid[81]), and (f) Fick diffusion
coefficients (solid,[87] dashed[88]). Error bars indicate 95% confidence intervals.
Computed
(a) densities, (b) thermodynamic factors, (c) shear viscosities,
(d) self-diffusivities of sucrose, (e) self-diffusivities of water,
and (f) Fick (mutual) diffusion coefficients for water–sucrose
mixtures as a function of the mass fraction of sucrose. Temperature
and pressure are 298 K and 1 atm, respectively. The results of the
original OPLS force field[25] are shown by
blue circles. The results of refined OPLS force field (scaled LJ energy
parameters and partial atomic charges of all atoms of sucrose by factors
of 0.8 and 0.95, respectively) are shown by red squares. Lines represent
experimental data for (a) densities (solid,[84] dashed[85]), (b) thermodynamic factors
(solid,[82] dashed[83]), (c) shear viscosities (solid,[80] dashed[81]), (d) self-diffusivities of sucrose (solid,[81] dashed[86]), (e) self-diffusivities
of water (solid[81]), and (f) Fick diffusion
coefficients (solid,[87] dashed[88]). Error bars indicate 95% confidence intervals.As shown in Figure c–f, transport properties computed
using the refined OPLS
force field are in excellent agreement with experimental data. At
low sucrose concentrations, both the original and refined OPLS force
fields yield similar values for the transport properties. Deviations
become significant as the concentration of sucrose increases. In agreement
with the work of Batista et al.,[13] the
shear viscosities (Figure c) computed based on the original OPLS force field are overestimated
by up to 300% at a sucrose mass fraction of 0.6. For the refined OPLS
force field, this deviation reaches a maximum of 30%. Figure d shows that the refined force
field provides better estimates for the self-diffusion coefficients
of sucrose at high sucrose mass fractions. This is due to less self-association,
leading to higher mobility of sucrose molecules. In Figure e, no significant differences
between self-diffusion coefficients of water computed using the original
and refined OPLS force fields are observed. Both force fields were
combined with the SPC/Fw water model, which mainly determines the
self-diffusivity of water. As the concentration of sucrose increases,
the sucrose–water interactions gradually become more important
in determining the properties of the medium in which water molecules
diffuse. This leads to the small differences observed between computed
self-diffusivities at high sucrose mass fractions. In Figure f, Fick diffusion coefficients
are compared with experiments. Similar to what is observed for the
shear viscosity, Fick diffusivities computed using the refined OPLS
force field are significantly closer to experimental values than those
computed based on the original OPLS force field.To verify whether
the optimum scaling factors for LJ energy parameters
(0.8) and partial atomic charges (0.95) are transferable to other
carbohydrates, MD simulations were performed for aqueous solutions
of the monosaccharided-glucose at 298 K and 1 atm. Since
mixtures of glucose with mass fractions above 51% produce α-d-glucose monohydrate, the following mass fractions of water–glucose
mixtures are considered: 20%, 30%, 40%, and 50%. d-Glucose
forms two anomers in an aqueous solution.[75] Simulation input files are constructed for a ratio 1:2 of α-d-glucose to β-d-glucose.[15,27,76,77] Lay et al.[15] observed
that the exact value of this ratio does not affect the outcome of
MD simulations.In Figure , computed
thermodynamic and transport properties of water–glucose mixtures
are compared with experiments. The order of the subfigures is the
same as in Figure . The results shown in Figure a and b clearly show that, compared to the original OPLS force
field, the refined OPLS force field leads to a significantly better
description of thermodynamic properties. Computed thermodynamic factors
are larger than 1 and close to experimental values; the unphysical
self-association of glucose molecules at elevated concentrations is
thus resolved by using the refined OPLS force field. Figure c–f shows the transport
properties for glucose–water mixtures (i.e., the shear viscosity,
self-diffusivity of glucose and water, and Fick diffusion coefficient).
A good agreement between experimental data and computed transport
properties is observed. At low mass fractions of glucose (wglucose ≤ 0.4), the original OPLS force
field shows slightly better agreement with experimental data. However,
it is important to note that, for these diluted solutions, the difference
between the results obtained based on these two force fields is at
most 40% (for self-diffusivity of glucose at a mass fraction of 40%).
This is mainly due to the low concentration of glucose, which decreases
the effect of the carbohydrate force field on mixture properties.
As the mass fraction of glucose rises above 40%, the refined OPLS
force field provides better estimates for transport properties. At
these concentrations, the results computed based on the original OPLS
force field deviate significantly from experiments.[13]
Figure 6
Computed (a) densities, (b) thermodynamic factors, (c) shear viscosities,
(d) self-diffusivities of glucose, (e) self-diffusivities of water,
and (f) Fick (mutual) diffusion coefficients for water–glucose
mixtures as a function of the mass fraction of glucose. Temperature
and pressure are 298 K and 1 atm, respectively. The results of the
original OPLS force field[25] are shown by
blue circles. The results of the refined OPLS force field (scaled
LJ energy parameters and partial atomic charges of all atoms of glucose
by factors of 0.8 and 0.95, respectively) are shown by red squares.
Solid lines represent experimental data for (a) densities (solid,[89] dashed[90]), (b) thermodynamic
factors (solid,[91] dashed[92]), (c) shear viscosities (solid,[78] dahsed[89]), (d) self-diffusivities of
glucose (solid[90]), (e) self-diffusivities
of water (solid,[90] dashed[93]), and (f) Fick diffusion coefficients (solid,[94] dahsed[95]). Error
bars indicate 95% confidence intervals.
Computed (a) densities, (b) thermodynamic factors, (c) shear viscosities,
(d) self-diffusivities of glucose, (e) self-diffusivities of water,
and (f) Fick (mutual) diffusion coefficients for water–glucose
mixtures as a function of the mass fraction of glucose. Temperature
and pressure are 298 K and 1 atm, respectively. The results of the
original OPLS force field[25] are shown by
blue circles. The results of the refined OPLS force field (scaled
LJ energy parameters and partial atomic charges of all atoms of glucose
by factors of 0.8 and 0.95, respectively) are shown by red squares.
Solid lines represent experimental data for (a) densities (solid,[89] dashed[90]), (b) thermodynamic
factors (solid,[91] dashed[92]), (c) shear viscosities (solid,[78] dahsed[89]), (d) self-diffusivities of
glucose (solid[90]), (e) self-diffusivities
of water (solid,[90] dashed[93]), and (f) Fick diffusion coefficients (solid,[94] dahsed[95]). Error
bars indicate 95% confidence intervals.By increasing the temperature of the water–glucose
mixture,
the solubility of glucose in water increases, and mixtures with higher
mass fractions of glucose can be realized. For these concentrated
solutions, the refined OPLS force field is expected to lead to significant
improvements over the original OPLS force field. To verify this, we
computed the shear viscosity of an aqueous solution with a glucose
mass fraction of 60%, at 313.15 K and 1 atm. The shear viscosities
computed based on the original and refined OPLS force fields are 32 ±
4 cP and 15.0 ± 1.5 cP, respectively. Compared to an experimental
value of 13.08 cP for this mixture,[78] the
original OPLS force field leads to a considerable overestimation of
the shear viscosity (of about 150%). The refined OPLS force field
significantly improves the description at such a high glucose mass
fraction.
Conclusions
For
aqueous solutions of carbohydrates, most force fields predict
self-aggregation of solute molecules due to the overestimation of
solute–solute interactions. This overestimation results in
large deviations of computed properties from experimental data, especially
for concentrated solutions, which are relevant to food and biotechnological
industries. To decrease the tendency of solute molecules to self-aggregate,
we proposed scaling the Lennard-Jones energy parameters (ϵ)
and partial atomic charges (q) of the OPLS force
field. In this way, accurate estimates were obtained for thermodynamic
and transport properties of aqueous solutions of sucrose with mass
fractions in the range 20%–60%. For this optimization, the
three-site SPC/Fw water model was used. No modification in the bonded
and nonbonded interaction parameters of the water model was applied.
The optimum scaling factors for the Lennard-Jones energy parameters
and partial atomic charges were obtained by reproducing experimental
thermodynamic factors and shear viscosities of aqueous sucrose solutions.
These factors are 0.8 and 0.95, respectively. For both the original
and refined OPLS force fields, MD simulations were performed to calculate
thermodynamic properties (i.e., liquid densities and thermodynamic
factors) and transport properties (i.e., shear viscosities, self-diffusivities
of water and sucrose, and Fick diffusion coefficients). Excellent
agreement is observed between the properties computed based on the
refined OPLS force field and experiments, for a wide range of sucrose
concentrations. The transferability of the optimum scaling factors
was verified by performing MD simulations of aqueous solutions of d-glucose. The computed thermodynamic and transport properties
agree well with available experimental data, especially at high concentrations
of glucose. This suggests that the scaling factors are transferable
to other carbohydrates. By using the refined OPLS force field, accurate
estimates for thermodynamic and transport properties can be obtained.
While the proposed method for optimizing the nonbonded interactions
of a force field was verified for the OPLS force field, this method
may also be used for other force fields combined with other water
models.
Authors: Peter Krüger; Sondre K Schnell; Dick Bedeaux; Signe Kjelstrup; Thijs J H Vlugt; Jean-Marc Simon Journal: J Phys Chem Lett Date: 2012-12-28 Impact factor: 6.475
Authors: Philipp S Schmalhorst; Felix Deluweit; Roger Scherrers; Carl-Philipp Heisenberg; Mateusz Sikora Journal: J Chem Theory Comput Date: 2017-09-08 Impact factor: 6.006